RNA–Protein interactions for RNA: ENST00000562601.5

CDH13-206, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-206ENST00000562601 COL9A1P20849 921 aa8.54□□□□□ -1.04
CDH13-206ENST00000562601 RGL3Q3MIN7 710 aa8.54□□□□□ -1.04
CDH13-206ENST00000562601 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.54□□□□□ -1.04
CDH13-206ENST00000562601 RNF166Q96A37 237 aaPredicted RBP8.54□□□□□ -1.04
CDH13-206ENST00000562601 STAC3Q96MF2 364 aa8.54□□□□□ -1.04
CDH13-206ENST00000562601 PLEKHG1Q9ULL1 1385 aa8.53□□□□□ -1.04
CDH13-206ENST00000562601 RBM27Q9P2N5 1060 aaKnown RBP8.53□□□□□ -1.04
CDH13-206ENST00000562601 VPS9D1Q9Y2B5 631 aa8.53□□□□□ -1.04
CDH13-206ENST00000562601 FCHSD2O94868 740 aa8.52□□□□□ -1.05
CDH13-206ENST00000562601 NBPF3Q9H094 633 aa8.52□□□□□ -1.05
CDH13-206ENST00000562601 CDHR5Q9HBB8 845 aa8.52□□□□□ -1.05
CDH13-206ENST00000562601 NEXMIFQ5QGS0 1516 aa8.52□□□□□ -1.05
CDH13-206ENST00000562601 CCDC144AA2RUR9 1427 aa8.52□□□□□ -1.05
CDH13-206ENST00000562601 XIRP1Q702N8 1843 aaKnown RBP8.52□□□□□ -1.05
CDH13-206ENST00000562601 PPLO60437 1756 aa8.51□□□□□ -1.05
CDH13-206ENST00000562601 CPS1P31327 1500 aa8.51□□□□□ -1.05
CDH13-206ENST00000562601 TRIM6-TRIM34B2RNG4 842 aa8.51□□□□□ -1.05
CDH13-206ENST00000562601 UBAP1LF5GYI3 381 aa8.51□□□□□ -1.05
CDH13-206ENST00000562601 HRCP23327 699 aa8.51□□□□□ -1.05
CDH13-206ENST00000562601 PRSS12P56730 875 aa8.51□□□□□ -1.05
CDH13-206ENST00000562601 RBM26Q5T8P6 1007 aaKnown RBP8.51□□□□□ -1.05
CDH13-206ENST00000562601 RABGEF1Q9UJ41 708 aa8.51□□□□□ -1.05
CDH13-206ENST00000562601 CHD2O14647 1828 aaKnown RBP8.51□□□□□ -1.05
CDH13-206ENST00000562601 ACIN1Q9UKV3 1341 aaKnown RBP8.51□□□□□ -1.05
CDH13-206ENST00000562601 NRXN3Q9Y4C0 1643 aa8.51□□□□□ -1.05
CDH13-206ENST00000562601 LRRC7Q96NW7 1537 aa8.5□□□□□ -1.05
CDH13-206ENST00000562601 KCNA6P17658 529 aa8.5□□□□□ -1.05
CDH13-206ENST00000562601 TRIM26Q12899 539 aaPredicted RBP8.5□□□□□ -1.05
CDH13-206ENST00000562601 PTGDRQ13258 359 aa8.5□□□□□ -1.05
CDH13-206ENST00000562601 ADAMTS13Q76LX8 1427 aa8.5□□□□□ -1.05
CDH13-206ENST00000562601 PACS2Q86VP3 889 aa8.5□□□□□ -1.05
CDH13-206ENST00000562601 PROSER2Q86WR7 435 aaPredicted RBP8.5□□□□□ -1.05
CDH13-206ENST00000562601 GPIHBP1Q8IV16 184 aa8.5□□□□□ -1.05
CDH13-206ENST00000562601 CDCA7LQ96GN5 454 aa8.5□□□□□ -1.05
CDH13-206ENST00000562601 TBX22Q9Y458 520 aa8.5□□□□□ -1.05
CDH13-206ENST00000562601 PIP4K2BP78356 416 aa8.49□□□□□ -1.05
CDH13-206ENST00000562601 PROX2Q3B8N5 592 aa8.49□□□□□ -1.05
CDH13-206ENST00000562601 ANKRD30BQ9BXX2 1392 aa8.48□□□□□ -1.05
CDH13-206ENST00000562601 SPATA31E1Q6ZUB1 1445 aa8.48□□□□□ -1.05
CDH13-206ENST00000562601 HRO43593 1189 aa8.48□□□□□ -1.05
CDH13-206ENST00000562601 HIC1Q14526 733 aa8.48□□□□□ -1.05
CDH13-206ENST00000562601 NPDC1Q9NQX5 325 aaPredicted RBP8.48□□□□□ -1.05
CDH13-206ENST00000562601 IQSEC2Q5JU85 1478 aa8.48□□□□□ -1.05
CDH13-206ENST00000562601 IFT172Q9UG01 1749 aa8.48□□□□□ -1.05
CDH13-206ENST00000562601 RPGRIP1LQ68CZ1 1315 aa8.48□□□□□ -1.05
CDH13-206ENST00000562601 ADGRF5Q8IZF2 1346 aa8.48□□□□□ -1.05
CDH13-206ENST00000562601 METP08581 1390 aa8.48□□□□□ -1.05
CDH13-206ENST00000562601 PTPRUQ92729 1446 aa8.47□□□□□ -1.05
CDH13-206ENST00000562601 NBPF26B4DH59 902 aa8.47□□□□□ -1.05
CDH13-206ENST00000562601 LMOD2Q6P5Q4 547 aa8.47□□□□□ -1.05
CDH13-206ENST00000562601 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.47□□□□□ -1.05
CDH13-206ENST00000562601 MRPL50Q8N5N7 158 aaKnown RBP8.47□□□□□ -1.05
CDH13-206ENST00000562601 AMOTL2Q9Y2J4 779 aa8.47□□□□□ -1.05
CDH13-206ENST00000562601 SETBP1Q9Y6X0 1596 aa8.47□□□□□ -1.05
CDH13-206ENST00000562601 TMEM94Q12767 1356 aa8.47□□□□□ -1.05
CDH13-206ENST00000562601 LAPTM4BQ86VI4 370 aa8.46□□□□□ -1.06
CDH13-206ENST00000562601 KIAA1468Q9P260 1216 aa8.46□□□□□ -1.06
CDH13-206ENST00000562601 DIP2AQ14689 1571 aa8.46□□□□□ -1.06
CDH13-206ENST00000562601 NWD1Q149M9 1564 aa8.46□□□□□ -1.06
CDH13-206ENST00000562601 ALKQ9UM73 1620 aa8.46□□□□□ -1.06
CDH13-206ENST00000562601 GOLGA8CPA6NN73 597 aa8.45□□□□□ -1.06
CDH13-206ENST00000562601 BHMG1C9JSJ3 638 aaPredicted RBP8.45□□□□□ -1.06
CDH13-206ENST00000562601 TOM1O60784 492 aa8.45□□□□□ -1.06
CDH13-206ENST00000562601 PADI6Q6TGC4 694 aa8.45□□□□□ -1.06
CDH13-206ENST00000562601 C14orf37Q86TY3 774 aa8.45□□□□□ -1.06
CDH13-206ENST00000562601 TSKSQ9UJT2 592 aa8.45□□□□□ -1.06
CDH13-206ENST00000562601 SETD1AO15047 1707 aaKnown RBP8.45□□□□□ -1.06
CDH13-206ENST00000562601 TMEM132EQ6IEE7 984 aa8.44□□□□□ -1.06
CDH13-206ENST00000562601 DCAF11Q8TEB1 546 aa8.44□□□□□ -1.06
CDH13-206ENST00000562601 SIN3AQ96ST3 1273 aa8.44□□□□□ -1.06
CDH13-206ENST00000562601 NKTRP30414 1462 aaKnown RBP8.44□□□□□ -1.06
CDH13-206ENST00000562601 GNPATO15228 680 aa8.43□□□□□ -1.06
CDH13-206ENST00000562601 NEUROD1Q13562 356 aa8.43□□□□□ -1.06
CDH13-206ENST00000562601 TTC13Q8NBP0 860 aa8.43□□□□□ -1.06
CDH13-206ENST00000562601 STK26Q9P289 416 aa8.43□□□□□ -1.06
CDH13-206ENST00000562601 PIK3R4Q99570 1358 aa8.43□□□□□ -1.06
CDH13-206ENST00000562601 XRN1Q8IZH2 1706 aaKnown RBP8.43□□□□□ -1.06
CDH13-206ENST00000562601 CFAP70Q5T0N1 1121 aa8.42□□□□□ -1.06
CDH13-206ENST00000562601 PCGF6Q9BYE7 350 aa8.42□□□□□ -1.06
CDH13-206ENST00000562601 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.41□□□□□ -1.06
CDH13-206ENST00000562601 MSH6P52701 1360 aa8.41□□□□□ -1.06
CDH13-206ENST00000562601 DHX57Q6P158 1386 aaKnown RBP8.41□□□□□ -1.06
CDH13-206ENST00000562601 GPR37O15354 613 aa8.41□□□□□ -1.06
CDH13-206ENST00000562601 HSPA1LP34931 641 aa8.41□□□□□ -1.06
CDH13-206ENST00000562601 FAM98CQ17RN3 349 aaKnown RBP8.41□□□□□ -1.06
CDH13-206ENST00000562601 TATDN2Q93075 761 aa8.41□□□□□ -1.06
CDH13-206ENST00000562601 PNMA3Q9UL41 463 aa8.41□□□□□ -1.06
CDH13-206ENST00000562601 PIK3C2GO75747 1445 aa8.4□□□□□ -1.06
CDH13-206ENST00000562601 ROBO2Q9HCK4 1378 aa8.4□□□□□ -1.06
CDH13-206ENST00000562601 ASXL1Q8IXJ9 1541 aa8.39□□□□□ -1.07
CDH13-206ENST00000562601 ATF3P18847 181 aa8.39□□□□□ -1.07
CDH13-206ENST00000562601 NUDT18Q6ZVK8 323 aa8.39□□□□□ -1.07
CDH13-206ENST00000562601 WAPLQ7Z5K2 1190 aa8.39□□□□□ -1.07
CDH13-206ENST00000562601 ANKK1Q8NFD2 765 aa8.39□□□□□ -1.07
CDH13-206ENST00000562601 RBM46Q8TBY0 533 aaKnown RBP8.39□□□□□ -1.07
CDH13-206ENST00000562601 C19orf44Q9H6X5 657 aa8.39□□□□□ -1.07
CDH13-206ENST00000562601 C14orf93Q9H972 538 aaKnown RBP8.39□□□□□ -1.07
CDH13-206ENST00000562601 SLAIN2Q9P270 581 aa8.39□□□□□ -1.07
CDH13-206ENST00000562601 FAM198AQ9UFP1 575 aa8.39□□□□□ -1.07
CDH13-206ENST00000562601 SEPT9Q9UHD8 586 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms