RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 LARP1Q6PKG0 1096 aaKnown RBP27.56■■■□□ 2
TSPAN3-210ENST00000561277 FYB1O15117 783 aa27.55■■■□□ 2
TSPAN3-210ENST00000561277 USP35Q9P2H5 1018 aa27.55■■■□□ 2
TSPAN3-210ENST00000561277 AXIN2Q9Y2T1 843 aa27.54■■■□□ 2
TSPAN3-210ENST00000561277 LTN1O94822 1766 aa27.54■■■□□ 2
TSPAN3-210ENST00000561277 SPATA31A1Q5TZJ5 1347 aa27.54■■■□□ 2
TSPAN3-210ENST00000561277 SEPT12Q8IYM1 358 aa27.53■■■□□ 2
TSPAN3-210ENST00000561277 KIF7Q2M1P5 1343 aa27.52■■■□□ 2
TSPAN3-210ENST00000561277 RGPD5Q99666 1765 aa27.52■■■□□ 2
TSPAN3-210ENST00000561277 BRWD3Q6RI45 1802 aa27.49■■□□□ 1.99
TSPAN3-210ENST00000561277 ONECUT3O60422 494 aaPredicted RBP27.49■■□□□ 1.99
TSPAN3-210ENST00000561277 PANK3Q9H999 370 aa27.49■■□□□ 1.99
TSPAN3-210ENST00000561277 EP400Q96L91 3159 aa27.49■■□□□ 1.99
TSPAN3-210ENST00000561277 ABCC6O95255 1503 aa27.49■■□□□ 1.99
TSPAN3-210ENST00000561277 FBLN1P23142 703 aa27.48■■□□□ 1.99
TSPAN3-210ENST00000561277 CRB1P82279 1406 aa27.48■■□□□ 1.99
TSPAN3-210ENST00000561277 CGNL1Q0VF96 1302 aa27.47■■□□□ 1.99
TSPAN3-210ENST00000561277 CSB-PGBD3P0DP91 1061 aa27.46■■□□□ 1.99
TSPAN3-210ENST00000561277 TOM1L2Q6ZVM7 507 aa27.46■■□□□ 1.99
TSPAN3-210ENST00000561277 THSD7AQ9UPZ6 1657 aa27.45■■□□□ 1.99
TSPAN3-210ENST00000561277 WDR17Q8IZU2 1322 aa27.45■■□□□ 1.99
TSPAN3-210ENST00000561277 TCP11L2Q8N4U5 519 aa27.44■■□□□ 1.98
TSPAN3-210ENST00000561277 MAP3K19Q56UN5 1328 aa27.44■■□□□ 1.98
TSPAN3-210ENST00000561277 UPF1Q92900 1129 aaKnown RBP eCLIP27.43■■□□□ 1.981e-6■■■□□ 17.8
TSPAN3-210ENST00000561277 RRS1Q15050 365 aaKnown RBP27.41■■□□□ 1.98
TSPAN3-210ENST00000561277 BARGINQ6ZT62 677 aa27.41■■□□□ 1.98
TSPAN3-210ENST00000561277 KRT27Q7Z3Y8 459 aa27.41■■□□□ 1.98
TSPAN3-210ENST00000561277 CCDC7Q96M83 1385 aa27.41■■□□□ 1.98
TSPAN3-210ENST00000561277 ERBB3P21860 1342 aa27.4■■□□□ 1.98
TSPAN3-210ENST00000561277 AMPHP49418 695 aa27.39■■□□□ 1.98
TSPAN3-210ENST00000561277 THRAP3Q9Y2W1 955 aaKnown RBP27.39■■□□□ 1.98
TSPAN3-210ENST00000561277 WASHC2AQ641Q2 1341 aa27.39■■□□□ 1.98
TSPAN3-210ENST00000561277 BLMP54132 1417 aaPredicted RBP27.39■■□□□ 1.97
TSPAN3-210ENST00000561277 ANKRD24Q8TF21 1146 aa27.39■■□□□ 1.97
TSPAN3-210ENST00000561277 IP6K1Q92551 441 aa27.39■■□□□ 1.97
TSPAN3-210ENST00000561277 ANKRD26Q9UPS8 1709 aa27.36■■□□□ 1.97
TSPAN3-210ENST00000561277 HOXC9P31274 260 aa27.36■■□□□ 1.97
TSPAN3-210ENST00000561277 LTV1Q96GA3 475 aaPredicted RBP27.36■■□□□ 1.97
TSPAN3-210ENST00000561277 CARD10Q9BWT7 1032 aa27.35■■□□□ 1.97
TSPAN3-210ENST00000561277 NLRP2Q9NX02 1062 aa27.35■■□□□ 1.97
TSPAN3-210ENST00000561277 KNSTRNQ9Y448 316 aa27.35■■□□□ 1.97
TSPAN3-210ENST00000561277 RTL1A6NKG5 1358 aa27.34■■□□□ 1.97
TSPAN3-210ENST00000561277 FAM182BQ5T319 152 aa27.34■■□□□ 1.97
TSPAN3-210ENST00000561277 WNK3Q9BYP7 1800 aa27.33■■□□□ 1.97
TSPAN3-210ENST00000561277 TNNT2P45379 298 aaPredicted RBP27.32■■□□□ 1.96
TSPAN3-210ENST00000561277 PEAK1Q9H792 1746 aa27.31■■□□□ 1.96
TSPAN3-210ENST00000561277 PARP4Q9UKK3 1724 aaKnown RBP27.31■■□□□ 1.96
TSPAN3-210ENST00000561277 NSD2O96028 1365 aa27.31■■□□□ 1.96
TSPAN3-210ENST00000561277 EMILIN1Q9Y6C2 1016 aa27.31■■□□□ 1.96
TSPAN3-210ENST00000561277 PDE3BQ13370 1112 aa27.3■■□□□ 1.96
TSPAN3-210ENST00000561277 LRRC37A3O60309 1634 aa27.29■■□□□ 1.96
TSPAN3-210ENST00000561277 FLT4P35916 1363 aa27.29■■□□□ 1.96
TSPAN3-210ENST00000561277 FAM208AQ9UK61 1670 aaKnown RBP27.29■■□□□ 1.96
TSPAN3-210ENST00000561277 PPM1GO15355 546 aaPredicted RBP27.28■■□□□ 1.96
TSPAN3-210ENST00000561277 HSP90AB2PQ58FF8 381 aa27.26■■□□□ 1.96
TSPAN3-210ENST00000561277 KIF24Q5T7B8 1368 aa27.26■■□□□ 1.95
TSPAN3-210ENST00000561277 DISP2A7MBM2 1401 aa27.26■■□□□ 1.95
TSPAN3-210ENST00000561277 MAP2P11137 1827 aaKnown RBP27.25■■□□□ 1.95
TSPAN3-210ENST00000561277 DDB1Q16531 1140 aa27.25■■□□□ 1.95
TSPAN3-210ENST00000561277 SMG6Q86US8 1419 aaKnown RBP27.25■■□□□ 1.95
TSPAN3-210ENST00000561277 MORC1Q86VD1 984 aa27.25■■□□□ 1.95
TSPAN3-210ENST00000561277 INSRP06213 1382 aa27.24■■□□□ 1.95
TSPAN3-210ENST00000561277 AMER1Q5JTC6 1135 aaPredicted RBP27.24■■□□□ 1.95
TSPAN3-210ENST00000561277 CDCA7Q9BWT1 371 aaPredicted RBP27.24■■□□□ 1.95
TSPAN3-210ENST00000561277 RGPD2P0DJD1 1756 aa27.23■■□□□ 1.95
TSPAN3-210ENST00000561277 POLKQ9UBT6 870 aa27.22■■□□□ 1.95
TSPAN3-210ENST00000561277 PER1O15534 1290 aaPredicted RBP27.22■■□□□ 1.95
TSPAN3-210ENST00000561277 CCDC125Q86Z20 511 aa27.21■■□□□ 1.95
TSPAN3-210ENST00000561277 IL2RBP14784 551 aa27.2■■□□□ 1.94
TSPAN3-210ENST00000561277 CNGB1Q14028 1251 aaPredicted RBP27.19■■□□□ 1.94
TSPAN3-210ENST00000561277 SF3B2Q13435 895 aaKnown RBP27.18■■□□□ 1.94
TSPAN3-210ENST00000561277 CC2D1BQ5T0F9 858 aaKnown RBP27.18■■□□□ 1.94
TSPAN3-210ENST00000561277 FAM196AQ6ZSG2 479 aa27.18■■□□□ 1.94
TSPAN3-210ENST00000561277 TNS2Q63HR2 1409 aa27.18■■□□□ 1.94
TSPAN3-210ENST00000561277 ZEB1P37275 1124 aaPredicted RBP27.18■■□□□ 1.94
TSPAN3-210ENST00000561277 USHBP1Q8N6Y0 703 aa27.18■■□□□ 1.94
TSPAN3-210ENST00000561277 EXOC5O00471 708 aa27.17■■□□□ 1.94
TSPAN3-210ENST00000561277 NBPF6Q5VWK0 638 aa27.17■■□□□ 1.94
TSPAN3-210ENST00000561277 NBPF4Q96M43 638 aa27.17■■□□□ 1.94
TSPAN3-210ENST00000561277 OVOS2A0A0G2JMS6 1433 aa27.16■■□□□ 1.94
TSPAN3-210ENST00000561277 RGPD1P0DJD0 1748 aa27.15■■□□□ 1.94
TSPAN3-210ENST00000561277 TRIM37O94972 964 aa27.14■■□□□ 1.93
TSPAN3-210ENST00000561277 MARCH10Q8NA82 808 aaPredicted RBP27.14■■□□□ 1.93
TSPAN3-210ENST00000561277 DEFB132Q7Z7B7 95 aa27.13■■□□□ 1.93
TSPAN3-210ENST00000561277 MEGF6O75095 1541 aa27.11■■□□□ 1.93
TSPAN3-210ENST00000561277 TNS1Q9HBL0 1735 aaKnown RBP27.11■■□□□ 1.93
TSPAN3-210ENST00000561277 NPC1L1Q9UHC9 1359 aa27.08■■□□□ 1.93
TSPAN3-210ENST00000561277 EIF4A2Q14240 407 aaKnown RBP27.08■■□□□ 1.93
TSPAN3-210ENST00000561277 RAPGEF4Q8WZA2 1011 aa27.07■■□□□ 1.92
TSPAN3-210ENST00000561277 BAG6P46379 1132 aa27.06■■□□□ 1.92
TSPAN3-210ENST00000561277 EYA1Q99502 592 aa27.05■■□□□ 1.92
TSPAN3-210ENST00000561277 DDX54Q8TDD1 881 aaKnown RBP27.05■■□□□ 1.92
TSPAN3-210ENST00000561277 SBF2Q86WG5 1849 aa27.03■■□□□ 1.92
TSPAN3-210ENST00000561277 TATP17735 454 aaPredicted RBP27.03■■□□□ 1.92
TSPAN3-210ENST00000561277 NCAPD2Q15021 1401 aa27.02■■□□□ 1.92
TSPAN3-210ENST00000561277 APBA3O96018 575 aa27.02■■□□□ 1.92
TSPAN3-210ENST00000561277 MTHFSP49914 203 aa27.02■■□□□ 1.92
TSPAN3-210ENST00000561277 EN1Q05925 392 aaPredicted RBP27.02■■□□□ 1.92
TSPAN3-210ENST00000561277 BCL9O00512 1426 aa27.02■■□□□ 1.92
TSPAN3-210ENST00000561277 ZCRB1Q8TBF4 217 aaKnown RBP27.01■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms