RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 KIF7Q2M1P5 1343 aa21.16■□□□□ 0.98
SNRPA1-213ENST00000560856 EVA1CP58658 441 aa21.16■□□□□ 0.98
SNRPA1-213ENST00000560856 SEPT12Q8IYM1 358 aa21.16■□□□□ 0.98
SNRPA1-213ENST00000560856 FAM98CQ17RN3 349 aaKnown RBP21.15■□□□□ 0.98
SNRPA1-213ENST00000560856 FBLN1P23142 703 aa21.14■□□□□ 0.97
SNRPA1-213ENST00000560856 PANK3Q9H999 370 aa21.14■□□□□ 0.97
SNRPA1-213ENST00000560856 ABCC6O95255 1503 aa21.13■□□□□ 0.97
SNRPA1-213ENST00000560856 UPF1Q92900 1129 aaKnown RBP eCLIP21.12■□□□□ 0.97
SNRPA1-213ENST00000560856 BARGINQ6ZT62 677 aa21.11■□□□□ 0.97
SNRPA1-213ENST00000560856 RGPD5Q99666 1765 aa21.1■□□□□ 0.97
SNRPA1-213ENST00000560856 WDR17Q8IZU2 1322 aa21.1■□□□□ 0.97
SNRPA1-213ENST00000560856 BRWD3Q6RI45 1802 aa21.1■□□□□ 0.97
SNRPA1-213ENST00000560856 CRB1P82279 1406 aa21.1■□□□□ 0.97
SNRPA1-213ENST00000560856 MAP3K19Q56UN5 1328 aa21.09■□□□□ 0.97
SNRPA1-213ENST00000560856 THSD7AQ9UPZ6 1657 aa21.09■□□□□ 0.97
SNRPA1-213ENST00000560856 TCP11L2Q8N4U5 519 aa21.09■□□□□ 0.97
SNRPA1-213ENST00000560856 IP6K1Q92551 441 aa21.09■□□□□ 0.97
SNRPA1-213ENST00000560856 USP35Q9P2H5 1018 aa21.09■□□□□ 0.97
SNRPA1-213ENST00000560856 KIF20BQ96Q89 1820 aa21.08■□□□□ 0.97
SNRPA1-213ENST00000560856 CGNL1Q0VF96 1302 aa21.08■□□□□ 0.97
SNRPA1-213ENST00000560856 LTN1O94822 1766 aa21.08■□□□□ 0.97
SNRPA1-213ENST00000560856 CCDC7Q96M83 1385 aa21.08■□□□□ 0.96
SNRPA1-213ENST00000560856 WASHC2AQ641Q2 1341 aa21.07■□□□□ 0.96
SNRPA1-213ENST00000560856 THRAP3Q9Y2W1 955 aaKnown RBP21.07■□□□□ 0.96
SNRPA1-213ENST00000560856 TOM1L2Q6ZVM7 507 aa21.06■□□□□ 0.96
SNRPA1-213ENST00000560856 KRT27Q7Z3Y8 459 aa21.06■□□□□ 0.96
SNRPA1-213ENST00000560856 ERBB3P21860 1342 aa21.05■□□□□ 0.96
SNRPA1-213ENST00000560856 RRS1Q15050 365 aaKnown RBP21.05■□□□□ 0.96
SNRPA1-213ENST00000560856 CARD10Q9BWT7 1032 aa21.05■□□□□ 0.96
SNRPA1-213ENST00000560856 EP400Q96L91 3159 aa21.05■□□□□ 0.96
SNRPA1-213ENST00000560856 HOXC9P31274 260 aa21.04■□□□□ 0.96
SNRPA1-213ENST00000560856 BLMP54132 1417 aaPredicted RBP21.04■□□□□ 0.96
SNRPA1-213ENST00000560856 A0A0G2JS52 829 aa21.03■□□□□ 0.96
SNRPA1-213ENST00000560856 PER1O15534 1290 aaPredicted RBP21.03■□□□□ 0.96
SNRPA1-213ENST00000560856 MYT1Q01538 1121 aa21.03■□□□□ 0.96
SNRPA1-213ENST00000560856 ANKRD24Q8TF21 1146 aa21.03■□□□□ 0.96
SNRPA1-213ENST00000560856 CSB-PGBD3P0DP91 1061 aa21.02■□□□□ 0.96
SNRPA1-213ENST00000560856 AMPHP49418 695 aa21.01■□□□□ 0.95
SNRPA1-213ENST00000560856 RTL1A6NKG5 1358 aa21■□□□□ 0.95
SNRPA1-213ENST00000560856 AMER1Q5JTC6 1135 aaPredicted RBP21■□□□□ 0.95
SNRPA1-213ENST00000560856 DISP2A7MBM2 1401 aa20.99■□□□□ 0.95
SNRPA1-213ENST00000560856 EMILIN1Q9Y6C2 1016 aa20.99■□□□□ 0.95
SNRPA1-213ENST00000560856 NSD2O96028 1365 aa20.98■□□□□ 0.95
SNRPA1-213ENST00000560856 PEAK1Q9H792 1746 aa20.98■□□□□ 0.95
SNRPA1-213ENST00000560856 FAM182BQ5T319 152 aa20.98■□□□□ 0.95
SNRPA1-213ENST00000560856 NLRP2Q9NX02 1062 aa20.98■□□□□ 0.95
SNRPA1-213ENST00000560856 KNSTRNQ9Y448 316 aa20.98■□□□□ 0.95
SNRPA1-213ENST00000560856 KIF24Q5T7B8 1368 aa20.97■□□□□ 0.95
SNRPA1-213ENST00000560856 HSP90AB2PQ58FF8 381 aa20.97■□□□□ 0.95
SNRPA1-213ENST00000560856 PARP4Q9UKK3 1724 aaKnown RBP20.96■□□□□ 0.95
SNRPA1-213ENST00000560856 ANKRD26Q9UPS8 1709 aa20.96■□□□□ 0.95
SNRPA1-213ENST00000560856 LTV1Q96GA3 475 aaPredicted RBP20.96■□□□□ 0.95
SNRPA1-213ENST00000560856 POLKQ9UBT6 870 aa20.96■□□□□ 0.95
SNRPA1-213ENST00000560856 INSRP06213 1382 aa20.96■□□□□ 0.95
SNRPA1-213ENST00000560856 FLT4P35916 1363 aa20.96■□□□□ 0.95
SNRPA1-213ENST00000560856 CDCA7Q9BWT1 371 aaPredicted RBP20.95■□□□□ 0.94
SNRPA1-213ENST00000560856 CCDC125Q86Z20 511 aa20.94■□□□□ 0.94
SNRPA1-213ENST00000560856 WNK3Q9BYP7 1800 aa20.93■□□□□ 0.94
SNRPA1-213ENST00000560856 TNNT2P45379 298 aaPredicted RBP20.92■□□□□ 0.94
SNRPA1-213ENST00000560856 PDE3BQ13370 1112 aa20.92■□□□□ 0.94
SNRPA1-213ENST00000560856 DDB1Q16531 1140 aa20.92■□□□□ 0.94
SNRPA1-213ENST00000560856 MAP2P11137 1827 aaKnown RBP20.92■□□□□ 0.94
SNRPA1-213ENST00000560856 LRRC37A3O60309 1634 aa20.91■□□□□ 0.94
SNRPA1-213ENST00000560856 NBPF6Q5VWK0 638 aa20.91■□□□□ 0.94
SNRPA1-213ENST00000560856 MORC1Q86VD1 984 aa20.91■□□□□ 0.94
SNRPA1-213ENST00000560856 NBPF4Q96M43 638 aa20.91■□□□□ 0.94
SNRPA1-213ENST00000560856 FAM196AQ6ZSG2 479 aa20.9■□□□□ 0.94
SNRPA1-213ENST00000560856 FAM208AQ9UK61 1670 aaKnown RBP20.89■□□□□ 0.94
SNRPA1-213ENST00000560856 NPC1L1Q9UHC9 1359 aa20.89■□□□□ 0.93
SNRPA1-213ENST00000560856 IL2RBP14784 551 aa20.89■□□□□ 0.93
SNRPA1-213ENST00000560856 MARCH10Q8NA82 808 aaPredicted RBP20.89■□□□□ 0.93
SNRPA1-213ENST00000560856 RGPD2P0DJD1 1756 aa20.89■□□□□ 0.93
SNRPA1-213ENST00000560856 PPM1GO15355 546 aaPredicted RBP20.88■□□□□ 0.93
SNRPA1-213ENST00000560856 SMG6Q86US8 1419 aaKnown RBP20.87■□□□□ 0.93
SNRPA1-213ENST00000560856 EXOC5O00471 708 aa20.87■□□□□ 0.93
SNRPA1-213ENST00000560856 ZEB1P37275 1124 aaPredicted RBP20.86■□□□□ 0.93
SNRPA1-213ENST00000560856 TNS2Q63HR2 1409 aa20.86■□□□□ 0.93
SNRPA1-213ENST00000560856 CC2D1BQ5T0F9 858 aaKnown RBP20.85■□□□□ 0.93
SNRPA1-213ENST00000560856 USHBP1Q8N6Y0 703 aa20.85■□□□□ 0.93
SNRPA1-213ENST00000560856 DEFB132Q7Z7B7 95 aa20.84■□□□□ 0.93
SNRPA1-213ENST00000560856 BCL9O00512 1426 aa20.84■□□□□ 0.93
SNRPA1-213ENST00000560856 NCAPD2Q15021 1401 aa20.84■□□□□ 0.93
SNRPA1-213ENST00000560856 TRIM37O94972 964 aa20.83■□□□□ 0.93
SNRPA1-213ENST00000560856 EIF4A2Q14240 407 aaKnown RBP20.83■□□□□ 0.93
SNRPA1-213ENST00000560856 OVOS2A0A0G2JMS6 1433 aa20.83■□□□□ 0.93
SNRPA1-213ENST00000560856 EYA1Q99502 592 aa20.82■□□□□ 0.92
SNRPA1-213ENST00000560856 MEGF6O75095 1541 aa20.82■□□□□ 0.92
SNRPA1-213ENST00000560856 SF3B2Q13435 895 aaKnown RBP20.8■□□□□ 0.92
SNRPA1-213ENST00000560856 TNS1Q9HBL0 1735 aaKnown RBP20.79■□□□□ 0.92
SNRPA1-213ENST00000560856 RGPD1P0DJD0 1748 aa20.78■□□□□ 0.92
SNRPA1-213ENST00000560856 MTHFSP49914 203 aa20.78■□□□□ 0.92
SNRPA1-213ENST00000560856 PTF1AQ7RTS3 328 aa20.78■□□□□ 0.92
SNRPA1-213ENST00000560856 SBF2Q86WG5 1849 aa20.77■□□□□ 0.92
SNRPA1-213ENST00000560856 BAG6P46379 1132 aa20.77■□□□□ 0.92
SNRPA1-213ENST00000560856 ZCRB1Q8TBF4 217 aaKnown RBP20.77■□□□□ 0.92
SNRPA1-213ENST00000560856 RAPGEF4Q8WZA2 1011 aa20.76■□□□□ 0.91
SNRPA1-213ENST00000560856 IGSF1Q8N6C5 1336 aa20.76■□□□□ 0.91
SNRPA1-213ENST00000560856 TATP17735 454 aaPredicted RBP20.75■□□□□ 0.91
SNRPA1-213ENST00000560856 EN1Q05925 392 aaPredicted RBP20.75■□□□□ 0.91
SNRPA1-213ENST00000560856 CNGB1Q14028 1251 aaPredicted RBP20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms