RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 AKAP12Q02952 1782 aa15.19■□□□□ 0.02
CDC42BPB-207ENST00000560492 USP19O94966 1318 aa15.18■□□□□ 0.02
CDC42BPB-207ENST00000560492 OVOS2A0A0G2JMS6 1433 aa15.18■□□□□ 0.02
CDC42BPB-207ENST00000560492 OVOS2A0A0J9YW53 1432 aa15.18■□□□□ 0.02
CDC42BPB-207ENST00000560492 OVOS2Q6IE36 1432 aa15.18■□□□□ 0.02
CDC42BPB-207ENST00000560492 CRB1P82279 1406 aa15.17■□□□□ 0.02
CDC42BPB-207ENST00000560492 LRRC37A3O60309 1634 aa15.17■□□□□ 0.02
CDC42BPB-207ENST00000560492 NLRP6P59044 892 aa15.17■□□□□ 0.02
CDC42BPB-207ENST00000560492 TOM1L2Q6ZVM7 507 aa15.17■□□□□ 0.02
CDC42BPB-207ENST00000560492 WNK3Q9BYP7 1800 aa15.17■□□□□ 0.02
CDC42BPB-207ENST00000560492 CENPJQ9HC77 1338 aaPredicted RBP15.17■□□□□ 0.02
CDC42BPB-207ENST00000560492 C11orf95C9JLR9 678 aaPredicted RBP15.16■□□□□ 0.02
CDC42BPB-207ENST00000560492 KCNQ2O43526 872 aa15.16■□□□□ 0.02
CDC42BPB-207ENST00000560492 DDB1Q16531 1140 aa15.16■□□□□ 0.02
CDC42BPB-207ENST00000560492 NBPF1Q3BBV0 1214 aa15.16■□□□□ 0.02
CDC42BPB-207ENST00000560492 SOX12O15370 315 aa15.15■□□□□ 0.02
CDC42BPB-207ENST00000560492 RGPD3A6NKT7 1758 aaPredicted RBP15.15■□□□□ 0.02
CDC42BPB-207ENST00000560492 RGPD4Q7Z3J3 1758 aa15.15■□□□□ 0.02
CDC42BPB-207ENST00000560492 RGPD5Q99666 1765 aa15.15■□□□□ 0.02
CDC42BPB-207ENST00000560492 BCL11BQ9C0K0 894 aaPredicted RBP15.14■□□□□ 0.01
CDC42BPB-207ENST00000560492 CSB-PGBD3P0DP91 1061 aa15.13■□□□□ 0.01
CDC42BPB-207ENST00000560492 PEAK1Q9H792 1746 aa15.13■□□□□ 0.01
CDC42BPB-207ENST00000560492 CABP1Q9NZU7 370 aa15.13■□□□□ 0.01
CDC42BPB-207ENST00000560492 PIK3C2AO00443 1686 aa15.12■□□□□ 0.01
CDC42BPB-207ENST00000560492 USP6P35125 1406 aa15.12■□□□□ 0.01
CDC42BPB-207ENST00000560492 BRD4O60885 1362 aaPredicted RBP15.11■□□□□ 0.01
CDC42BPB-207ENST00000560492 NINLQ9Y2I6 1382 aa15.11■□□□□ 0.01
CDC42BPB-207ENST00000560492 SLIT3O75094 1523 aa15.11■□□□□ 0.01
CDC42BPB-207ENST00000560492 AATKQ6ZMQ8 1374 aa15.11■□□□□ 0.01
CDC42BPB-207ENST00000560492 KAT6BQ8WYB5 2073 aa15.1■□□□□ 0.01
CDC42BPB-207ENST00000560492 CASZ1Q86V15 1759 aa15.09■□□□□ 0.01
CDC42BPB-207ENST00000560492 ZBTB7AO95365 584 aa15.09■□□□□ 0.01
CDC42BPB-207ENST00000560492 ANO8Q9HCE9 1232 aaPredicted RBP15.09■□□□□ 0.01
CDC42BPB-207ENST00000560492 COL18A1P39060 1754 aa15.08■□□□□ 0.01
CDC42BPB-207ENST00000560492 PLSCR1O15162 318 aa15.08■□□□□ 0
CDC42BPB-207ENST00000560492 MYOM1P52179 1685 aa15.08■□□□□ 0
CDC42BPB-207ENST00000560492 EVC2Q86UK5 1308 aa15.08■□□□□ 0
CDC42BPB-207ENST00000560492 WDR17Q8IZU2 1322 aa15.08■□□□□ 0
CDC42BPB-207ENST00000560492 CPSF1Q10570 1443 aaKnown RBP15.08■□□□□ 0
CDC42BPB-207ENST00000560492 TRPM1Q7Z4N2 1603 aa15.07■□□□□ 0
CDC42BPB-207ENST00000560492 PTF1AQ7RTS3 328 aa15.07■□□□□ 0
CDC42BPB-207ENST00000560492 STK32BQ9NY57 414 aa15.07■□□□□ 0
CDC42BPB-207ENST00000560492 ATF5Q9Y2D1 282 aaPredicted RBP15.07■□□□□ 0
CDC42BPB-207ENST00000560492 MARCH10Q8NA82 808 aaPredicted RBP15.06■□□□□ 0
CDC42BPB-207ENST00000560492 CDCA7Q9BWT1 371 aaPredicted RBP15.06■□□□□ 0
CDC42BPB-207ENST00000560492 FOXD4L1Q9NU39 408 aa15.06■□□□□ 0
CDC42BPB-207ENST00000560492 AXIN2Q9Y2T1 843 aa15.06■□□□□ 0
CDC42BPB-207ENST00000560492 KCNH5Q8NCM2 988 aa15.05■□□□□ -0
CDC42BPB-207ENST00000560492 PDGFDQ9GZP0 370 aaPredicted RBP15.05■□□□□ -0
CDC42BPB-207ENST00000560492 EXOC5O00471 708 aa15.04■□□□□ -0
CDC42BPB-207ENST00000560492 TTC21BQ7Z4L5 1316 aa15.03■□□□□ -0
CDC42BPB-207ENST00000560492 TXNRD1Q16881 649 aa15.03■□□□□ -0
CDC42BPB-207ENST00000560492 ARHGEF25Q86VW2 580 aa15.02■□□□□ -0
CDC42BPB-207ENST00000560492 ZNF692Q9BU19 519 aaPredicted RBP15.02■□□□□ -0
CDC42BPB-207ENST00000560492 CARD10Q9BWT7 1032 aa15.02■□□□□ -0
CDC42BPB-207ENST00000560492 LTN1O94822 1766 aa15.02□□□□□ -0.01
CDC42BPB-207ENST00000560492 ROCK2O75116 1388 aaKnown RBP15.01□□□□□ -0.01
CDC42BPB-207ENST00000560492 KTN1Q86UP2 1357 aaKnown RBP15.01□□□□□ -0.01
CDC42BPB-207ENST00000560492 NHSQ6T4R5 1651 aa15.01□□□□□ -0.01
CDC42BPB-207ENST00000560492 ACSBG1Q96GR2 724 aa15.01□□□□□ -0.01
CDC42BPB-207ENST00000560492 CHD4Q14839 1912 aa15.01□□□□□ -0.01
CDC42BPB-207ENST00000560492 CCDC7Q96M83 1385 aa15□□□□□ -0.01
CDC42BPB-207ENST00000560492 TTC21AQ8NDW8 1320 aa15□□□□□ -0.01
CDC42BPB-207ENST00000560492 SLC15A2Q16348 729 aa15□□□□□ -0.01
CDC42BPB-207ENST00000560492 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15□□□□□ -0.01
CDC42BPB-207ENST00000560492 PROM2Q8N271 834 aa15□□□□□ -0.01
CDC42BPB-207ENST00000560492 TNS2Q63HR2 1409 aa15□□□□□ -0.01
CDC42BPB-207ENST00000560492 L3MBTL2Q969R5 705 aa14.99□□□□□ -0.01
CDC42BPB-207ENST00000560492 FHDC1Q9C0D6 1143 aaPredicted RBP14.99□□□□□ -0.01
CDC42BPB-207ENST00000560492 NLRP2Q9NX02 1062 aa14.99□□□□□ -0.01
CDC42BPB-207ENST00000560492 MON2Q7Z3U7 1717 aa14.99□□□□□ -0.01
CDC42BPB-207ENST00000560492 BTAF1O14981 1849 aa14.99□□□□□ -0.01
CDC42BPB-207ENST00000560492 NFAT5O94916 1531 aa14.98□□□□□ -0.01
CDC42BPB-207ENST00000560492 NEUROD1Q13562 356 aa14.98□□□□□ -0.01
CDC42BPB-207ENST00000560492 KLHL34Q8N239 644 aa14.98□□□□□ -0.01
CDC42BPB-207ENST00000560492 PTGER2P43116 358 aa14.97□□□□□ -0.01
CDC42BPB-207ENST00000560492 MTFR1LQ9H019 292 aa14.97□□□□□ -0.01
CDC42BPB-207ENST00000560492 BCL9O00512 1426 aa14.97□□□□□ -0.01
CDC42BPB-207ENST00000560492 POLA2Q14181 598 aa14.96□□□□□ -0.01
CDC42BPB-207ENST00000560492 TMC1Q8TDI8 760 aa14.96□□□□□ -0.01
CDC42BPB-207ENST00000560492 SYT17Q9BSW7 474 aa14.96□□□□□ -0.01
CDC42BPB-207ENST00000560492 ABCC6O95255 1503 aa14.96□□□□□ -0.02
CDC42BPB-207ENST00000560492 IL2RBP14784 551 aa14.94□□□□□ -0.02
CDC42BPB-207ENST00000560492 ZNF784Q8NCA9 323 aaPredicted RBP14.94□□□□□ -0.02
CDC42BPB-207ENST00000560492 ARXQ96QS3 562 aa14.94□□□□□ -0.02
CDC42BPB-207ENST00000560492 SIN3AQ96ST3 1273 aa14.94□□□□□ -0.02
CDC42BPB-207ENST00000560492 ZBTB22O15209 634 aa14.93□□□□□ -0.02
CDC42BPB-207ENST00000560492 NME9Q86XW9 330 aa14.93□□□□□ -0.02
CDC42BPB-207ENST00000560492 PELP1Q8IZL8 1130 aaKnown RBP14.93□□□□□ -0.02
CDC42BPB-207ENST00000560492 ERBB3P21860 1342 aa14.92□□□□□ -0.02
CDC42BPB-207ENST00000560492 HDGFL2Q7Z4V5 671 aaPredicted RBP14.92□□□□□ -0.02
CDC42BPB-207ENST00000560492 ANKRD24Q8TF21 1146 aa14.92□□□□□ -0.02
CDC42BPB-207ENST00000560492 SENP3-EIF4A1A0A087X0R7 540 aa14.91□□□□□ -0.02
CDC42BPB-207ENST00000560492 GPR162Q16538 588 aa14.91□□□□□ -0.02
CDC42BPB-207ENST00000560492 USP54Q70EL1 1684 aa14.9□□□□□ -0.02
CDC42BPB-207ENST00000560492 DDX54Q8TDD1 881 aaKnown RBP14.9□□□□□ -0.02
CDC42BPB-207ENST00000560492 SYTL4Q96C24 671 aaPredicted RBP14.9□□□□□ -0.02
CDC42BPB-207ENST00000560492 LTV1Q96GA3 475 aaPredicted RBP14.9□□□□□ -0.02
CDC42BPB-207ENST00000560492 PAPPAQ13219 1627 aa14.9□□□□□ -0.02
CDC42BPB-207ENST00000560492 FAM208AQ9UK61 1670 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms