RNA–Protein interactions for RNA: ENST00000558651.5

HMG20A-205, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 494 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-205ENST00000558651 VEGFBP49765 207 aa6.58□□□□□ -1.36
HMG20A-205ENST00000558651 DHX9Q08211 1270 aaKnown RBP6.58□□□□□ -1.36
HMG20A-205ENST00000558651 LINC00528Q8N1L1 170 aa6.58□□□□□ -1.36
HMG20A-205ENST00000558651 PROCA1Q8NCQ7 364 aaPredicted RBP6.58□□□□□ -1.36
HMG20A-205ENST00000558651 TRIM52Q96A61 297 aa6.58□□□□□ -1.36
HMG20A-205ENST00000558651 PCMTD1Q96MG8 357 aaPredicted RBP6.58□□□□□ -1.36
HMG20A-205ENST00000558651 TSEN34Q9BSV6 310 aaKnown RBP6.58□□□□□ -1.36
HMG20A-205ENST00000558651 KLF16Q9BXK1 252 aaPredicted RBP6.58□□□□□ -1.36
HMG20A-205ENST00000558651 NR6A1Q15406 480 aa6.57□□□□□ -1.36
HMG20A-205ENST00000558651 ERFEQ4G0M1 354 aa6.57□□□□□ -1.36
HMG20A-205ENST00000558651 PPP2R2DQ66LE6 453 aa6.57□□□□□ -1.36
HMG20A-205ENST00000558651 H3BM21 787 aa6.56□□□□□ -1.36
HMG20A-205ENST00000558651 MEIOBQ8N635 442 aa6.56□□□□□ -1.36
HMG20A-205ENST00000558651 KCTD15Q96SI1 283 aaPredicted RBP6.56□□□□□ -1.36
HMG20A-205ENST00000558651 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.56□□□□□ -1.36
HMG20A-205ENST00000558651 GPSM3Q9Y4H4 160 aa6.56□□□□□ -1.36
HMG20A-205ENST00000558651 SOBPA7XYQ1 873 aa6.55□□□□□ -1.36
HMG20A-205ENST00000558651 GMPRP36959 345 aa6.55□□□□□ -1.36
HMG20A-205ENST00000558651 NBPF20Q3BBV1 942 aa6.55□□□□□ -1.36
HMG20A-205ENST00000558651 NEUROD2Q15784 382 aa6.54□□□□□ -1.36
HMG20A-205ENST00000558651 PPP1R26Q5T8A7 1209 aaPredicted RBP6.54□□□□□ -1.36
HMG20A-205ENST00000558651 DZIP3Q86Y13 1208 aaKnown RBP6.54□□□□□ -1.36
HMG20A-205ENST00000558651 USP17L8P0C7I0 530 aa6.53□□□□□ -1.36
HMG20A-205ENST00000558651 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.53□□□□□ -1.36
HMG20A-205ENST00000558651 TTLL8A6PVC2 850 aa6.52□□□□□ -1.37
HMG20A-205ENST00000558651 RFC5P40937 340 aa6.52□□□□□ -1.37
HMG20A-205ENST00000558651 RAB15P59190 212 aa6.52□□□□□ -1.37
HMG20A-205ENST00000558651 TMEM259Q4ZIN3 620 aa6.52□□□□□ -1.37
HMG20A-205ENST00000558651 ZSCAN1Q8NBB4 408 aa6.52□□□□□ -1.37
HMG20A-205ENST00000558651 ADAM32Q8TC27 787 aa6.52□□□□□ -1.37
HMG20A-205ENST00000558651 GOPCQ9HD26 462 aa6.51□□□□□ -1.37
HMG20A-205ENST00000558651 SOS2Q07890 1332 aaPredicted RBP6.5□□□□□ -1.37
HMG20A-205ENST00000558651 CBLBQ13191 982 aa6.5□□□□□ -1.37
HMG20A-205ENST00000558651 FIGNL2A6NMB9 653 aa6.49□□□□□ -1.37
HMG20A-205ENST00000558651 INTS6LQ5JSJ4 861 aaKnown RBP6.49□□□□□ -1.37
HMG20A-205ENST00000558651 IL27Q8NEV9 243 aa6.49□□□□□ -1.37
HMG20A-205ENST00000558651 POLMQ9NP87 494 aaPredicted RBP6.49□□□□□ -1.37
HMG20A-205ENST00000558651 DNMT3LQ9UJW3 386 aa6.49□□□□□ -1.37
HMG20A-205ENST00000558651 ERBB4Q15303 1308 aa6.49□□□□□ -1.37
HMG20A-205ENST00000558651 PPFIA3O75145 1194 aa6.48□□□□□ -1.37
HMG20A-205ENST00000558651 RELBQ01201 579 aa6.48□□□□□ -1.37
HMG20A-205ENST00000558651 LCE2CQ5TA81 110 aa6.48□□□□□ -1.37
HMG20A-205ENST00000558651 Q6ZVU0 165 aa6.48□□□□□ -1.37
HMG20A-205ENST00000558651 ZNF592Q92610 1267 aa6.48□□□□□ -1.37
HMG20A-205ENST00000558651 HMX1Q9NP08 348 aaPredicted RBP6.48□□□□□ -1.37
HMG20A-205ENST00000558651 APBB1O00213 710 aa6.47□□□□□ -1.37
HMG20A-205ENST00000558651 SPINT1O43278 529 aa6.47□□□□□ -1.37
HMG20A-205ENST00000558651 FBXO31Q5XUX0 539 aaPredicted RBP6.47□□□□□ -1.37
HMG20A-205ENST00000558651 EPS8L1Q8TE68 723 aa6.47□□□□□ -1.37
HMG20A-205ENST00000558651 ESF1Q9H501 851 aaKnown RBP6.47□□□□□ -1.37
HMG20A-205ENST00000558651 ZNF330Q9Y3S2 320 aaPredicted RBP6.47□□□□□ -1.37
HMG20A-205ENST00000558651 VSIG8P0DPA2 414 aa6.46□□□□□ -1.38
HMG20A-205ENST00000558651 PTSQ03393 145 aa6.46□□□□□ -1.38
HMG20A-205ENST00000558651 AGBL1Q96MI9 1066 aa6.46□□□□□ -1.38
HMG20A-205ENST00000558651 PCDHB9Q9Y5E1 797 aa6.46□□□□□ -1.38
HMG20A-205ENST00000558651 ZBBXA8MT70 800 aa6.45□□□□□ -1.38
HMG20A-205ENST00000558651 SEPT12Q8IYM1 358 aa6.45□□□□□ -1.38
HMG20A-205ENST00000558651 ERVH48-1M5A8F1 160 aa6.44□□□□□ -1.38
HMG20A-205ENST00000558651 ADH1AP07327 375 aa6.44□□□□□ -1.38
HMG20A-205ENST00000558651 RNF20Q5VTR2 975 aa6.44□□□□□ -1.38
HMG20A-205ENST00000558651 CCDC125Q86Z20 511 aa6.44□□□□□ -1.38
HMG20A-205ENST00000558651 ZNF784Q8NCA9 323 aaPredicted RBP6.44□□□□□ -1.38
HMG20A-205ENST00000558651 INSM2Q96T92 566 aaPredicted RBP6.44□□□□□ -1.38
HMG20A-205ENST00000558651 ZNF395Q9H8N7 513 aaPredicted RBP6.44□□□□□ -1.38
HMG20A-205ENST00000558651 TMPRSS4Q9NRS4 437 aa6.44□□□□□ -1.38
HMG20A-205ENST00000558651 MCCD1P59942 119 aaPredicted RBP6.43□□□□□ -1.38
HMG20A-205ENST00000558651 CCDC155Q8N6L0 562 aa6.43□□□□□ -1.38
HMG20A-205ENST00000558651 OCSTAMPQ9BR26 566 aa6.43□□□□□ -1.38
HMG20A-205ENST00000558651 CDC14CA4D256 554 aa6.42□□□□□ -1.38
HMG20A-205ENST00000558651 CTSOP43234 321 aaPredicted RBP6.42□□□□□ -1.38
HMG20A-205ENST00000558651 CYLDQ9NQC7 956 aa6.42□□□□□ -1.38
HMG20A-205ENST00000558651 PTGIRP43119 386 aa6.41□□□□□ -1.38
HMG20A-205ENST00000558651 SV2AQ7L0J3 742 aa6.41□□□□□ -1.38
HMG20A-205ENST00000558651 TRIM34Q9BYJ4 488 aa6.41□□□□□ -1.38
HMG20A-205ENST00000558651 PRM3Q9NNZ6 103 aa6.41□□□□□ -1.38
HMG20A-205ENST00000558651 ESPNB1AK53 854 aa6.4□□□□□ -1.38
HMG20A-205ENST00000558651 BANK1Q8NDB2 785 aa6.4□□□□□ -1.38
HMG20A-205ENST00000558651 CNTNAP3BQ96NU0 1288 aa6.4□□□□□ -1.38
HMG20A-205ENST00000558651 CNTNAP3Q9BZ76 1288 aa6.4□□□□□ -1.38
HMG20A-205ENST00000558651 NDUFB9Q9Y6M9 179 aa6.4□□□□□ -1.38
HMG20A-205ENST00000558651 SLC35F4A4IF30 521 aa6.39□□□□□ -1.39
HMG20A-205ENST00000558651 ATP5J2-PTCD1G3V325 749 aa6.39□□□□□ -1.39
HMG20A-205ENST00000558651 GIGYF1O75420 1035 aaPredicted RBP6.39□□□□□ -1.39
HMG20A-205ENST00000558651 FBXO45P0C2W1 286 aa6.39□□□□□ -1.39
HMG20A-205ENST00000558651 ITGA6P23229 1130 aa6.39□□□□□ -1.39
HMG20A-205ENST00000558651 BRPF1P55201 1214 aaPredicted RBP6.39□□□□□ -1.39
HMG20A-205ENST00000558651 LYSMD3Q7Z3D4 306 aa6.39□□□□□ -1.39
HMG20A-205ENST00000558651 RNF217Q8TC41 542 aa6.39□□□□□ -1.39
HMG20A-205ENST00000558651 NLRP3Q96P20 1036 aa6.39□□□□□ -1.39
HMG20A-205ENST00000558651 MEN1O00255 615 aa6.38□□□□□ -1.39
HMG20A-205ENST00000558651 LILRA1O75019 489 aa6.38□□□□□ -1.39
HMG20A-205ENST00000558651 NR1H3Q13133 447 aa6.38□□□□□ -1.39
HMG20A-205ENST00000558651 VWA5B2Q8N398 1253 aa6.38□□□□□ -1.39
HMG20A-205ENST00000558651 NANOS1Q8WY41 292 aaKnown RBP6.38□□□□□ -1.39
HMG20A-205ENST00000558651 COL25A1Q9BXS0 654 aaPredicted RBP6.38□□□□□ -1.39
HMG20A-205ENST00000558651 ADD1P35611 737 aaKnown RBP6.37□□□□□ -1.39
HMG20A-205ENST00000558651 SLC27A3Q5K4L6 730 aa6.37□□□□□ -1.39
HMG20A-205ENST00000558651 CC2D2BQ6DHV5 1058 aa6.37□□□□□ -1.39
HMG20A-205ENST00000558651 FOXR1Q6PIV2 292 aa6.37□□□□□ -1.39
HMG20A-205ENST00000558651 CYP2U1Q7Z449 544 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms