RNA–Protein interactions for RNA: ENST00000558651.5

HMG20A-205, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 494 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-205ENST00000558651 AEBP2Q6ZN18 517 aaPredicted RBP18.48■□□□□ 0.55
HMG20A-205ENST00000558651 CHIC1Q5VXU3 224 aa17.77■□□□□ 0.44
HMG20A-205ENST00000558651 SENP3Q9H4L4 574 aaPredicted RBP15.91■□□□□ 0.14
HMG20A-205ENST00000558651 PHF23Q9BUL5 403 aaPredicted RBP15.66■□□□□ 0.1
HMG20A-205ENST00000558651 FOXD1Q16676 465 aa14.71□□□□□ -0.05
HMG20A-205ENST00000558651 PLPPR3Q6T4P5 718 aa14.34□□□□□ -0.11
HMG20A-205ENST00000558651 PIAS4Q8N2W9 510 aaPredicted RBP13.88□□□□□ -0.19
HMG20A-205ENST00000558651 MSH5O43196 834 aa13.84□□□□□ -0.19
HMG20A-205ENST00000558651 ADRA2BP18089 450 aa13.84□□□□□ -0.19
HMG20A-205ENST00000558651 PPP6R1Q9UPN7 881 aa13.81□□□□□ -0.2
HMG20A-205ENST00000558651 POTEDQ86YR6 584 aa13.17□□□□□ -0.3
HMG20A-205ENST00000558651 SCAF1Q9H7N4 1312 aaKnown RBP12.83□□□□□ -0.36
HMG20A-205ENST00000558651 MAPK8IP2Q13387 824 aaPredicted RBP12.64□□□□□ -0.39
HMG20A-205ENST00000558651 DMRT2Q9Y5R5 561 aa12.59□□□□□ -0.39
HMG20A-205ENST00000558651 PPP4R3CPQ6ZMV5 832 aa12.55□□□□□ -0.4
HMG20A-205ENST00000558651 CNKSR2Q8WXI2 1034 aa12.31□□□□□ -0.44
HMG20A-205ENST00000558651 NCBP3Q53F19 620 aaKnown RBP12.22□□□□□ -0.45
HMG20A-205ENST00000558651 DCAF8L1A6NGE4 600 aa12.2□□□□□ -0.46
HMG20A-205ENST00000558651 HOXD11P31277 338 aaPredicted RBP12.15□□□□□ -0.46
HMG20A-205ENST00000558651 RNF216Q9NWF9 866 aaPredicted RBP12.14□□□□□ -0.47
HMG20A-205ENST00000558651 NPM3O75607 178 aaKnown RBP11.9□□□□□ -0.5
HMG20A-205ENST00000558651 CACNB1Q02641 598 aaPredicted RBP11.81□□□□□ -0.52
HMG20A-205ENST00000558651 KCNA4P22459 653 aa11.78□□□□□ -0.52
HMG20A-205ENST00000558651 RNF39Q9H2S5 420 aa11.73□□□□□ -0.53
HMG20A-205ENST00000558651 DNAJC5BQ9UF47 199 aa11.73□□□□□ -0.53
HMG20A-205ENST00000558651 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.71□□□□□ -0.53
HMG20A-205ENST00000558651 C1QBPQ07021 282 aaKnown RBP11.64□□□□□ -0.55
HMG20A-205ENST00000558651 U3KPZ7 1027 aaPredicted RBP11.35□□□□□ -0.59
HMG20A-205ENST00000558651 SLC4A2P04920 1241 aa11.28□□□□□ -0.6
HMG20A-205ENST00000558651 APLP2Q06481 763 aa11.26□□□□□ -0.61
HMG20A-205ENST00000558651 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.24□□□□□ -0.61
HMG20A-205ENST00000558651 CAPN15O75808 1086 aa11.24□□□□□ -0.61
HMG20A-205ENST00000558651 HNRNPUL2Q1KMD3 747 aaKnown RBP11.24□□□□□ -0.61
HMG20A-205ENST00000558651 SLC4A1APQ9BWU0 796 aaKnown RBP11.24□□□□□ -0.61
HMG20A-205ENST00000558651 SAMD1Q6SPF0 538 aaPredicted RBP11.15□□□□□ -0.62
HMG20A-205ENST00000558651 SPINK5Q9NQ38 1064 aaPredicted RBP11.15□□□□□ -0.62
HMG20A-205ENST00000558651 MYCNP04198 464 aaPredicted RBP11.08□□□□□ -0.64
HMG20A-205ENST00000558651 TRHP20396 242 aaPredicted RBP11.08□□□□□ -0.64
HMG20A-205ENST00000558651 ZNF219Q9P2Y4 722 aaPredicted RBP11.08□□□□□ -0.64
HMG20A-205ENST00000558651 DSG3P32926 999 aa11.03□□□□□ -0.64
HMG20A-205ENST00000558651 FOXD4L1Q9NU39 408 aa11.02□□□□□ -0.65
HMG20A-205ENST00000558651 ABCB7O75027 752 aa10.94□□□□□ -0.66
HMG20A-205ENST00000558651 POLA2Q14181 598 aa10.78□□□□□ -0.68
HMG20A-205ENST00000558651 ZBTB22O15209 634 aa10.76□□□□□ -0.69
HMG20A-205ENST00000558651 ATXN8OSP0DMR3 200 aa10.68□□□□□ -0.7
HMG20A-205ENST00000558651 ATF5Q9Y2D1 282 aaPredicted RBP10.68□□□□□ -0.7
HMG20A-205ENST00000558651 RBM42Q9BTD8 480 aaKnown RBP10.66□□□□□ -0.7
HMG20A-205ENST00000558651 ZBTB12Q9Y330 459 aaPredicted RBP10.66□□□□□ -0.7
HMG20A-205ENST00000558651 EHMT2Q96KQ7 1210 aa10.48□□□□□ -0.73
HMG20A-205ENST00000558651 FBLN2P98095 1184 aa10.47□□□□□ -0.73
HMG20A-205ENST00000558651 CSRNP3Q8WYN3 585 aa10.43□□□□□ -0.74
HMG20A-205ENST00000558651 OSCARQ8IYS5 282 aa10.41□□□□□ -0.74
HMG20A-205ENST00000558651 POTEHQ6S545 545 aa10.39□□□□□ -0.75
HMG20A-205ENST00000558651 AKT1S1Q96B36 256 aa10.38□□□□□ -0.75
HMG20A-205ENST00000558651 CHRDL2Q6WN34 429 aa10.3□□□□□ -0.76
HMG20A-205ENST00000558651 SPDYE2BA6NHP3 402 aa10.28□□□□□ -0.76
HMG20A-205ENST00000558651 SPDYE6P0CI01 402 aa10.28□□□□□ -0.76
HMG20A-205ENST00000558651 SPDYE2Q495Y8 402 aa10.28□□□□□ -0.76
HMG20A-205ENST00000558651 REM2Q8IYK8 340 aaPredicted RBP10.25□□□□□ -0.77
HMG20A-205ENST00000558651 MKRN4PQ13434 485 aaPredicted RBP10.2□□□□□ -0.78
HMG20A-205ENST00000558651 ZNF692Q9BU19 519 aaPredicted RBP10.2□□□□□ -0.78
HMG20A-205ENST00000558651 PITPNM1O00562 1244 aa10.13□□□□□ -0.79
HMG20A-205ENST00000558651 SPDYE1Q8NFV5 336 aaPredicted RBP10.1□□□□□ -0.79
HMG20A-205ENST00000558651 CLEC11AQ9Y240 323 aa10.09□□□□□ -0.79
HMG20A-205ENST00000558651 SSUH2Q9Y2M2 353 aa10.08□□□□□ -0.8
HMG20A-205ENST00000558651 PIP4P2Q8N4L2 257 aa10.05□□□□□ -0.8
HMG20A-205ENST00000558651 PABPN1Q86U42 306 aaKnown RBP eCLIP10.02□□□□□ -0.81
HMG20A-205ENST00000558651 FXR2P51116 673 aaKnown RBP eCLIP9.99□□□□□ -0.81
HMG20A-205ENST00000558651 PRR29P0C7W0 189 aa9.94□□□□□ -0.82
HMG20A-205ENST00000558651 HAX1O00165 279 aa9.92□□□□□ -0.82
HMG20A-205ENST00000558651 PRKAR2AP13861 404 aaKnown RBP9.92□□□□□ -0.82
HMG20A-205ENST00000558651 SPDYE4A6NLX3 237 aa9.91□□□□□ -0.82
HMG20A-205ENST00000558651 STAG3Q9UJ98 1225 aa9.85□□□□□ -0.83
HMG20A-205ENST00000558651 SP7Q8TDD2 431 aaPredicted RBP9.82□□□□□ -0.84
HMG20A-205ENST00000558651 CHADLQ6NUI6 762 aa9.79□□□□□ -0.84
HMG20A-205ENST00000558651 FARP1Q9Y4F1 1045 aaPredicted RBP9.68□□□□□ -0.86
HMG20A-205ENST00000558651 C19orf67A6NJJ6 358 aa9.67□□□□□ -0.86
HMG20A-205ENST00000558651 EVX2Q03828 476 aa9.63□□□□□ -0.87
HMG20A-205ENST00000558651 CD44P16070 742 aaKnown RBP9.62□□□□□ -0.87
HMG20A-205ENST00000558651 CREBZFQ9NS37 354 aa9.61□□□□□ -0.87
HMG20A-205ENST00000558651 PLEKHG5O94827 1062 aa9.59□□□□□ -0.87
HMG20A-205ENST00000558651 NPM1P06748 294 aaKnown RBP eCLIP9.59□□□□□ -0.87
HMG20A-205ENST00000558651 PAK3O75914 559 aaPredicted RBP9.57□□□□□ -0.88
HMG20A-205ENST00000558651 PROM2Q8N271 834 aa9.57□□□□□ -0.88
HMG20A-205ENST00000558651 FKBP8Q14318 412 aa9.55□□□□□ -0.88
HMG20A-205ENST00000558651 CLCN6P51797 869 aa9.52□□□□□ -0.89
HMG20A-205ENST00000558651 ZRANB1Q9UGI0 708 aa9.52□□□□□ -0.89
HMG20A-205ENST00000558651 GABBR2O75899 941 aa9.51□□□□□ -0.89
HMG20A-205ENST00000558651 MIER1Q8N108 512 aa9.5□□□□□ -0.89
HMG20A-205ENST00000558651 PLCD3Q8N3E9 789 aa9.46□□□□□ -0.9
HMG20A-205ENST00000558651 ZNF579Q8NAF0 562 aaKnown RBP9.43□□□□□ -0.9
HMG20A-205ENST00000558651 ZBTB47Q9UFB7 747 aaPredicted RBP9.41□□□□□ -0.9
HMG20A-205ENST00000558651 FBXO3Q9UK99 471 aa9.41□□□□□ -0.9
HMG20A-205ENST00000558651 MNX1P50219 401 aaPredicted RBP9.4□□□□□ -0.9
HMG20A-205ENST00000558651 DCBLD2Q96PD2 775 aa9.4□□□□□ -0.9
HMG20A-205ENST00000558651 TSPYL2Q9H2G4 693 aaPredicted RBP9.36□□□□□ -0.91
HMG20A-205ENST00000558651 PHF12Q96QT6 1004 aa9.34□□□□□ -0.91
HMG20A-205ENST00000558651 GALR2O43603 387 aaPredicted RBP9.28□□□□□ -0.92
HMG20A-205ENST00000558651 FAM212AQ96EL1 285 aa9.24□□□□□ -0.93
HMG20A-205ENST00000558651 RASEFQ8IZ41 740 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms