RNA–Protein interactions for RNA: ENST00000558562.1

TMED3-205, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 938 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-205ENST00000558562 C11orf95C9JLR9 678 aaPredicted RBP18.92■□□□□ 0.62
TMED3-205ENST00000558562 SRPK2P78362 688 aaKnown RBP18.92■□□□□ 0.62
TMED3-205ENST00000558562 DDB1Q16531 1140 aa18.92■□□□□ 0.62
TMED3-205ENST00000558562 TOM1L2Q6ZVM7 507 aa18.91■□□□□ 0.62
TMED3-205ENST00000558562 PROM2Q8N271 834 aa18.91■□□□□ 0.62
TMED3-205ENST00000558562 CABP2Q9NPB3 220 aa18.91■□□□□ 0.62
TMED3-205ENST00000558562 ATF5Q9Y2D1 282 aaPredicted RBP18.91■□□□□ 0.62
TMED3-205ENST00000558562 RGPD3A6NKT7 1758 aaPredicted RBP18.91■□□□□ 0.62
TMED3-205ENST00000558562 RGPD4Q7Z3J3 1758 aa18.91■□□□□ 0.62
TMED3-205ENST00000558562 MYOM1P52179 1685 aa18.89■□□□□ 0.61
TMED3-205ENST00000558562 PTGER2P43116 358 aa18.89■□□□□ 0.61
TMED3-205ENST00000558562 NLRP6P59044 892 aa18.89■□□□□ 0.61
TMED3-205ENST00000558562 NBPF1Q3BBV0 1214 aa18.89■□□□□ 0.61
TMED3-205ENST00000558562 MARCH10Q8NA82 808 aaPredicted RBP18.89■□□□□ 0.61
TMED3-205ENST00000558562 ZNF784Q8NCA9 323 aaPredicted RBP18.88■□□□□ 0.61
TMED3-205ENST00000558562 AATKQ6ZMQ8 1374 aa18.88■□□□□ 0.61
TMED3-205ENST00000558562 AXIN2Q9Y2T1 843 aa18.87■□□□□ 0.61
TMED3-205ENST00000558562 CABP1Q9NZU7 370 aa18.85■□□□□ 0.61
TMED3-205ENST00000558562 TRPM1Q7Z4N2 1603 aa18.85■□□□□ 0.61
TMED3-205ENST00000558562 USP6P35125 1406 aa18.84■□□□□ 0.61
TMED3-205ENST00000558562 TXNRD1Q16881 649 aa18.84■□□□□ 0.61
TMED3-205ENST00000558562 FHDC1Q9C0D6 1143 aaPredicted RBP18.84■□□□□ 0.61
TMED3-205ENST00000558562 STK32BQ9NY57 414 aa18.84■□□□□ 0.61
TMED3-205ENST00000558562 SLIT3O75094 1523 aa18.84■□□□□ 0.61
TMED3-205ENST00000558562 WNK3Q9BYP7 1800 aa18.84■□□□□ 0.61
TMED3-205ENST00000558562 COL18A1P39060 1754 aa18.83■□□□□ 0.61
TMED3-205ENST00000558562 WDR17Q8IZU2 1322 aa18.83■□□□□ 0.61
TMED3-205ENST00000558562 SYT17Q9BSW7 474 aa18.83■□□□□ 0.6
TMED3-205ENST00000558562 AKAP12Q02952 1782 aa18.83■□□□□ 0.6
TMED3-205ENST00000558562 CENPJQ9HC77 1338 aaPredicted RBP18.82■□□□□ 0.6
TMED3-205ENST00000558562 SOX12O15370 315 aa18.82■□□□□ 0.6
TMED3-205ENST00000558562 KIAA1210Q9ULL0 1709 aa18.82■□□□□ 0.6
TMED3-205ENST00000558562 BRD4O60885 1362 aaPredicted RBP18.81■□□□□ 0.6
TMED3-205ENST00000558562 CSB-PGBD3P0DP91 1061 aa18.81■□□□□ 0.6
TMED3-205ENST00000558562 EIF4G2P78344 907 aaKnown RBP eCLIP18.81■□□□□ 0.6
TMED3-205ENST00000558562 SLC15A2Q16348 729 aa18.81■□□□□ 0.6
TMED3-205ENST00000558562 PIK3C2AO00443 1686 aa18.81■□□□□ 0.6
TMED3-205ENST00000558562 HSPA5P11021 654 aaKnown RBP18.8■□□□□ 0.6
TMED3-205ENST00000558562 CDCA7Q9BWT1 371 aaPredicted RBP18.8■□□□□ 0.6
TMED3-205ENST00000558562 RGPD5Q99666 1765 aa18.8■□□□□ 0.6
TMED3-205ENST00000558562 BCL9O00512 1426 aa18.79■□□□□ 0.6
TMED3-205ENST00000558562 CPSF1Q10570 1443 aaKnown RBP18.79■□□□□ 0.6
TMED3-205ENST00000558562 SENP3-EIF4A1A0A087X0R7 540 aa18.78■□□□□ 0.6
TMED3-205ENST00000558562 ARHGEF25Q86VW2 580 aa18.78■□□□□ 0.6
TMED3-205ENST00000558562 CARD10Q9BWT7 1032 aa18.78■□□□□ 0.6
TMED3-205ENST00000558562 MTFR1LQ9H019 292 aa18.78■□□□□ 0.6
TMED3-205ENST00000558562 QRICH2Q9H0J4 1663 aa18.78■□□□□ 0.6
TMED3-205ENST00000558562 EXOC5O00471 708 aa18.77■□□□□ 0.6
TMED3-205ENST00000558562 SGIP1Q9BQI5 828 aa18.77■□□□□ 0.6
TMED3-205ENST00000558562 ACSBG1Q96GR2 724 aa18.76■□□□□ 0.59
TMED3-205ENST00000558562 CHD4Q14839 1912 aa18.74■□□□□ 0.59
TMED3-205ENST00000558562 C1QTNF8P60827 252 aa18.74■□□□□ 0.59
TMED3-205ENST00000558562 ARXQ96QS3 562 aa18.74■□□□□ 0.59
TMED3-205ENST00000558562 TTC21BQ7Z4L5 1316 aa18.74■□□□□ 0.59
TMED3-205ENST00000558562 USP47Q96K76 1375 aa18.73■□□□□ 0.59
TMED3-205ENST00000558562 KCNH5Q8NCM2 988 aa18.73■□□□□ 0.59
TMED3-205ENST00000558562 ROCK2O75116 1388 aaKnown RBP18.71■□□□□ 0.59
TMED3-205ENST00000558562 TNS2Q63HR2 1409 aa18.71■□□□□ 0.59
TMED3-205ENST00000558562 EVC2Q86UK5 1308 aa18.7■□□□□ 0.58
TMED3-205ENST00000558562 NHSQ6T4R5 1651 aa18.69■□□□□ 0.58
TMED3-205ENST00000558562 CCDC7Q96M83 1385 aa18.69■□□□□ 0.58
TMED3-205ENST00000558562 GOLGB1Q14789 3259 aaKnown RBP18.69■□□□□ 0.58
TMED3-205ENST00000558562 ZNF827Q17R98 1081 aa18.69■□□□□ 0.58
TMED3-205ENST00000558562 CARD11Q9BXL7 1154 aa18.69■□□□□ 0.58
TMED3-205ENST00000558562 NFAT5O94916 1531 aa18.69■□□□□ 0.58
TMED3-205ENST00000558562 GPR162Q16538 588 aa18.68■□□□□ 0.58
TMED3-205ENST00000558562 KLHL34Q8N239 644 aa18.68■□□□□ 0.58
TMED3-205ENST00000558562 ZNF692Q9BU19 519 aaPredicted RBP18.68■□□□□ 0.58
TMED3-205ENST00000558562 PAPPAQ13219 1627 aa18.67■□□□□ 0.58
TMED3-205ENST00000558562 NLRP2Q9NX02 1062 aa18.67■□□□□ 0.58
TMED3-205ENST00000558562 KAT6BQ8WYB5 2073 aa18.67■□□□□ 0.58
TMED3-205ENST00000558562 BTAF1O14981 1849 aa18.66■□□□□ 0.58
TMED3-205ENST00000558562 DDX10Q13206 875 aaKnown RBP18.66■□□□□ 0.58
TMED3-205ENST00000558562 LRRC4BQ9NT99 713 aa18.66■□□□□ 0.58
TMED3-205ENST00000558562 TTC21AQ8NDW8 1320 aa18.66■□□□□ 0.58
TMED3-205ENST00000558562 PELP1Q8IZL8 1130 aaKnown RBP18.65■□□□□ 0.58
TMED3-205ENST00000558562 MAP3K5Q99683 1374 aa18.65■□□□□ 0.58
TMED3-205ENST00000558562 ABCC6O95255 1503 aa18.64■□□□□ 0.58
TMED3-205ENST00000558562 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.64■□□□□ 0.578e-7■■■■□ 23.1
TMED3-205ENST00000558562 MIER1Q8N108 512 aa18.64■□□□□ 0.57
TMED3-205ENST00000558562 KTN1Q86UP2 1357 aaKnown RBP18.64■□□□□ 0.57
TMED3-205ENST00000558562 IL2RBP14784 551 aa18.63■□□□□ 0.57
TMED3-205ENST00000558562 ERBB3P21860 1342 aa18.62■□□□□ 0.57
TMED3-205ENST00000558562 WASHC2AQ641Q2 1341 aa18.62■□□□□ 0.57
TMED3-205ENST00000558562 GIGYF1O75420 1035 aaPredicted RBP18.61■□□□□ 0.57
TMED3-205ENST00000558562 KCNQ4P56696 695 aa18.6■□□□□ 0.57
TMED3-205ENST00000558562 AKT1S1Q96B36 256 aa18.6■□□□□ 0.57
TMED3-205ENST00000558562 CEP350Q5VT06 3117 aa18.6■□□□□ 0.57
TMED3-205ENST00000558562 NME9Q86XW9 330 aa18.59■□□□□ 0.57
TMED3-205ENST00000558562 ANKRD24Q8TF21 1146 aa18.59■□□□□ 0.57
TMED3-205ENST00000558562 LTN1O94822 1766 aa18.58■□□□□ 0.57
TMED3-205ENST00000558562 POLD1P28340 1107 aa18.58■□□□□ 0.56
TMED3-205ENST00000558562 NLGN2Q8NFZ4 835 aa18.58■□□□□ 0.56
TMED3-205ENST00000558562 PNPLA7Q6ZV29 1317 aa18.57■□□□□ 0.56
TMED3-205ENST00000558562 DDX54Q8TDD1 881 aaKnown RBP18.57■□□□□ 0.56
TMED3-205ENST00000558562 MON2Q7Z3U7 1717 aa18.57■□□□□ 0.56
TMED3-205ENST00000558562 KIF7Q2M1P5 1343 aa18.56■□□□□ 0.56
TMED3-205ENST00000558562 IFFO2Q5TF58 517 aa18.56■□□□□ 0.56
TMED3-205ENST00000558562 SLC16A10Q8TF71 515 aa18.56■□□□□ 0.56
TMED3-205ENST00000558562 TFCP2L1Q9NZI6 479 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms