RNA–Protein interactions for RNA: ENST00000557889.1

CPNE6-205, Transcript of copine 6, humanhuman

TSL 4

Gene CPNE6, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-205ENST00000557889 PANK3Q9H999 370 aa19.53■□□□□ 0.72
CPNE6-205ENST00000557889 AXIN2Q9Y2T1 843 aa19.53■□□□□ 0.72
CPNE6-205ENST00000557889 ABCC6O95255 1503 aa19.52■□□□□ 0.72
CPNE6-205ENST00000557889 LARP1Q6PKG0 1096 aaKnown RBP19.52■□□□□ 0.72
CPNE6-205ENST00000557889 FAM98CQ17RN3 349 aaKnown RBP19.51■□□□□ 0.71
CPNE6-205ENST00000557889 SEPT12Q8IYM1 358 aa19.51■□□□□ 0.71
CPNE6-205ENST00000557889 CGNL1Q0VF96 1302 aa19.51■□□□□ 0.71
CPNE6-205ENST00000557889 KIF20BQ96Q89 1820 aa19.5■□□□□ 0.71
CPNE6-205ENST00000557889 CRB1P82279 1406 aa19.49■□□□□ 0.71
CPNE6-205ENST00000557889 BARGINQ6ZT62 677 aa19.48■□□□□ 0.71
CPNE6-205ENST00000557889 USP35Q9P2H5 1018 aa19.48■□□□□ 0.71
CPNE6-205ENST00000557889 THRAP3Q9Y2W1 955 aaKnown RBP19.48■□□□□ 0.71
CPNE6-205ENST00000557889 WDR17Q8IZU2 1322 aa19.48■□□□□ 0.71
CPNE6-205ENST00000557889 LTN1O94822 1766 aa19.47■□□□□ 0.71
CPNE6-205ENST00000557889 TCP11L2Q8N4U5 519 aa19.47■□□□□ 0.71
CPNE6-205ENST00000557889 CCDC7Q96M83 1385 aa19.46■□□□□ 0.71
CPNE6-205ENST00000557889 A0A0G2JS52 829 aa19.46■□□□□ 0.71
CPNE6-205ENST00000557889 MYT1Q01538 1121 aa19.46■□□□□ 0.71
CPNE6-205ENST00000557889 TOM1L2Q6ZVM7 507 aa19.46■□□□□ 0.71
CPNE6-205ENST00000557889 IP6K1Q92551 441 aa19.46■□□□□ 0.71
CPNE6-205ENST00000557889 MAP3K19Q56UN5 1328 aa19.46■□□□□ 0.71
CPNE6-205ENST00000557889 WASHC2AQ641Q2 1341 aa19.46■□□□□ 0.71
CPNE6-205ENST00000557889 RGPD5Q99666 1765 aa19.45■□□□□ 0.7
CPNE6-205ENST00000557889 BLMP54132 1417 aaPredicted RBP19.45■□□□□ 0.7
CPNE6-205ENST00000557889 FBLN1P23142 703 aa19.45■□□□□ 0.7
CPNE6-205ENST00000557889 THSD7AQ9UPZ6 1657 aa19.44■□□□□ 0.7
CPNE6-205ENST00000557889 CSB-PGBD3P0DP91 1061 aa19.44■□□□□ 0.7
CPNE6-205ENST00000557889 ERBB3P21860 1342 aa19.44■□□□□ 0.7
CPNE6-205ENST00000557889 AMPHP49418 695 aa19.43■□□□□ 0.7
CPNE6-205ENST00000557889 KRT27Q7Z3Y8 459 aa19.43■□□□□ 0.7
CPNE6-205ENST00000557889 UPF1Q92900 1129 aaKnown RBP eCLIP19.43■□□□□ 0.7
CPNE6-205ENST00000557889 CARD10Q9BWT7 1032 aa19.43■□□□□ 0.7
CPNE6-205ENST00000557889 KNSTRNQ9Y448 316 aa19.43■□□□□ 0.7
CPNE6-205ENST00000557889 BRWD3Q6RI45 1802 aa19.42■□□□□ 0.7
CPNE6-205ENST00000557889 HOXC9P31274 260 aa19.42■□□□□ 0.7
CPNE6-205ENST00000557889 RRS1Q15050 365 aaKnown RBP19.42■□□□□ 0.7
CPNE6-205ENST00000557889 ANKRD24Q8TF21 1146 aa19.42■□□□□ 0.7
CPNE6-205ENST00000557889 RTL1A6NKG5 1358 aa19.42■□□□□ 0.7
CPNE6-205ENST00000557889 NSD2O96028 1365 aa19.42■□□□□ 0.7
CPNE6-205ENST00000557889 KIF24Q5T7B8 1368 aa19.41■□□□□ 0.7
CPNE6-205ENST00000557889 ZEB1P37275 1124 aaPredicted RBP19.4■□□□□ 0.7
CPNE6-205ENST00000557889 PER1O15534 1290 aaPredicted RBP19.38■□□□□ 0.69
CPNE6-205ENST00000557889 CDCA7Q9BWT1 371 aaPredicted RBP19.38■□□□□ 0.69
CPNE6-205ENST00000557889 ANKRD26Q9UPS8 1709 aa19.38■□□□□ 0.69
CPNE6-205ENST00000557889 AMER1Q5JTC6 1135 aaPredicted RBP19.37■□□□□ 0.69
CPNE6-205ENST00000557889 NLRP2Q9NX02 1062 aa19.37■□□□□ 0.69
CPNE6-205ENST00000557889 FLT4P35916 1363 aa19.36■□□□□ 0.69
CPNE6-205ENST00000557889 LTV1Q96GA3 475 aaPredicted RBP19.36■□□□□ 0.69
CPNE6-205ENST00000557889 INSRP06213 1382 aa19.35■□□□□ 0.69
CPNE6-205ENST00000557889 PDE3BQ13370 1112 aa19.35■□□□□ 0.69
CPNE6-205ENST00000557889 CCDC125Q86Z20 511 aa19.35■□□□□ 0.69
CPNE6-205ENST00000557889 EMILIN1Q9Y6C2 1016 aa19.35■□□□□ 0.69
CPNE6-205ENST00000557889 PARP4Q9UKK3 1724 aaKnown RBP19.34■□□□□ 0.69
CPNE6-205ENST00000557889 HSP90AB2PQ58FF8 381 aa19.34■□□□□ 0.69
CPNE6-205ENST00000557889 MORC1Q86VD1 984 aa19.34■□□□□ 0.69
CPNE6-205ENST00000557889 PEAK1Q9H792 1746 aa19.34■□□□□ 0.69
CPNE6-205ENST00000557889 DISP2A7MBM2 1401 aa19.34■□□□□ 0.69
CPNE6-205ENST00000557889 FAM208AQ9UK61 1670 aaKnown RBP19.33■□□□□ 0.69
CPNE6-205ENST00000557889 TNNT2P45379 298 aaPredicted RBP19.33■□□□□ 0.68
CPNE6-205ENST00000557889 POLKQ9UBT6 870 aa19.33■□□□□ 0.68
CPNE6-205ENST00000557889 PPM1GO15355 546 aaPredicted RBP19.32■□□□□ 0.68
CPNE6-205ENST00000557889 DDB1Q16531 1140 aa19.32■□□□□ 0.68
CPNE6-205ENST00000557889 SMG6Q86US8 1419 aaKnown RBP19.32■□□□□ 0.68
CPNE6-205ENST00000557889 WNK3Q9BYP7 1800 aa19.32■□□□□ 0.68
CPNE6-205ENST00000557889 MAP2P11137 1827 aaKnown RBP19.31■□□□□ 0.68
CPNE6-205ENST00000557889 IL2RBP14784 551 aa19.31■□□□□ 0.68
CPNE6-205ENST00000557889 FAM182BQ5T319 152 aa19.31■□□□□ 0.68
CPNE6-205ENST00000557889 NPC1L1Q9UHC9 1359 aa19.31■□□□□ 0.68
CPNE6-205ENST00000557889 FAM196AQ6ZSG2 479 aa19.3■□□□□ 0.68
CPNE6-205ENST00000557889 EP400Q96L91 3159 aa19.3■□□□□ 0.68
CPNE6-205ENST00000557889 LRRC37A3O60309 1634 aa19.29■□□□□ 0.68
CPNE6-205ENST00000557889 EXOC5O00471 708 aa19.29■□□□□ 0.68
CPNE6-205ENST00000557889 NBPF6Q5VWK0 638 aa19.28■□□□□ 0.68
CPNE6-205ENST00000557889 NBPF4Q96M43 638 aa19.28■□□□□ 0.68
CPNE6-205ENST00000557889 CC2D1BQ5T0F9 858 aaKnown RBP19.27■□□□□ 0.68
CPNE6-205ENST00000557889 SF3B2Q13435 895 aaKnown RBP19.26■□□□□ 0.67
CPNE6-205ENST00000557889 TNS2Q63HR2 1409 aa19.25■□□□□ 0.67
CPNE6-205ENST00000557889 OVOS2A0A0G2JMS6 1433 aa19.25■□□□□ 0.67
CPNE6-205ENST00000557889 RGPD2P0DJD1 1756 aa19.24■□□□□ 0.67
CPNE6-205ENST00000557889 MARCH10Q8NA82 808 aaPredicted RBP19.24■□□□□ 0.67
CPNE6-205ENST00000557889 EIF4A2Q14240 407 aaKnown RBP19.22■□□□□ 0.67
CPNE6-205ENST00000557889 USHBP1Q8N6Y0 703 aa19.22■□□□□ 0.67
CPNE6-205ENST00000557889 BCL9O00512 1426 aa19.22■□□□□ 0.67
CPNE6-205ENST00000557889 TRIM37O94972 964 aa19.21■□□□□ 0.67
CPNE6-205ENST00000557889 RAPGEF4Q8WZA2 1011 aa19.21■□□□□ 0.67
CPNE6-205ENST00000557889 RGPD1P0DJD0 1748 aa19.2■□□□□ 0.66
CPNE6-205ENST00000557889 NCAPD2Q15021 1401 aa19.2■□□□□ 0.66
CPNE6-205ENST00000557889 EYA1Q99502 592 aa19.2■□□□□ 0.66
CPNE6-205ENST00000557889 MEGF6O75095 1541 aa19.2■□□□□ 0.66
CPNE6-205ENST00000557889 MTHFSP49914 203 aa19.19■□□□□ 0.66
CPNE6-205ENST00000557889 TATP17735 454 aaPredicted RBP19.18■□□□□ 0.66
CPNE6-205ENST00000557889 BAG6P46379 1132 aa19.18■□□□□ 0.66
CPNE6-205ENST00000557889 CNGB1Q14028 1251 aaPredicted RBP19.18■□□□□ 0.66
CPNE6-205ENST00000557889 DEFB132Q7Z7B7 95 aa19.18■□□□□ 0.66
CPNE6-205ENST00000557889 ZCRB1Q8TBF4 217 aaKnown RBP19.17■□□□□ 0.66
CPNE6-205ENST00000557889 IGSF1Q8N6C5 1336 aa19.16■□□□□ 0.66
CPNE6-205ENST00000557889 TNS1Q9HBL0 1735 aaKnown RBP19.16■□□□□ 0.66
CPNE6-205ENST00000557889 APBA3O96018 575 aa19.15■□□□□ 0.66
CPNE6-205ENST00000557889 DDX54Q8TDD1 881 aaKnown RBP19.15■□□□□ 0.66
CPNE6-205ENST00000557889 BCL11BQ9C0K0 894 aaPredicted RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms