RNA–Protein interactions for RNA: ENST00000557820.5

PKNOX1-207, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 4

Gene PKNOX1, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-207ENST00000557820 TTC21AQ8NDW8 1320 aa8.85□□□□□ -0.99
PKNOX1-207ENST00000557820 FBLN1P23142 703 aa8.85□□□□□ -0.99
PKNOX1-207ENST00000557820 UPF1Q92900 1129 aaKnown RBP eCLIP8.85□□□□□ -0.99
PKNOX1-207ENST00000557820 TERF2IPQ9NYB0 399 aa8.85□□□□□ -0.99
PKNOX1-207ENST00000557820 ANKRD36BQ8N2N9 1353 aa8.85□□□□□ -0.99
PKNOX1-207ENST00000557820 BRWD3Q6RI45 1802 aa8.84□□□□□ -0.99
PKNOX1-207ENST00000557820 COL5A2P05997 1499 aaPredicted RBP8.84□□□□□ -0.99
PKNOX1-207ENST00000557820 OVOS2A0A0J9YW53 1432 aa8.84□□□□□ -0.99
PKNOX1-207ENST00000557820 EIF4G2P78344 907 aaKnown RBP eCLIP8.84□□□□□ -0.99
PKNOX1-207ENST00000557820 OVOS2Q6IE36 1432 aa8.84□□□□□ -0.99
PKNOX1-207ENST00000557820 AXIN2Q9Y2T1 843 aa8.84□□□□□ -0.99
PKNOX1-207ENST00000557820 SPATA31A1Q5TZJ5 1347 aa8.83□□□□□ -1
PKNOX1-207ENST00000557820 NSD3Q9BZ95 1437 aa8.83□□□□□ -1
PKNOX1-207ENST00000557820 C11orf95C9JLR9 678 aaPredicted RBP8.83□□□□□ -1
PKNOX1-207ENST00000557820 EVA1CP58658 441 aa8.83□□□□□ -1
PKNOX1-207ENST00000557820 PUS7Q96PZ0 661 aaKnown RBP8.83□□□□□ -1
PKNOX1-207ENST00000557820 CARD14Q9BXL6 1004 aa8.83□□□□□ -1
PKNOX1-207ENST00000557820 GGNBP2Q9H3C7 697 aa8.83□□□□□ -1
PKNOX1-207ENST00000557820 COL18A1P39060 1754 aa8.83□□□□□ -1
PKNOX1-207ENST00000557820 USP31Q70CQ4 1352 aa8.83□□□□□ -1
PKNOX1-207ENST00000557820 NINLQ9Y2I6 1382 aa8.83□□□□□ -1
PKNOX1-207ENST00000557820 USP54Q70EL1 1684 aa8.82□□□□□ -1
PKNOX1-207ENST00000557820 THSD7AQ9UPZ6 1657 aa8.82□□□□□ -1
PKNOX1-207ENST00000557820 CAPN15O75808 1086 aa8.82□□□□□ -1
PKNOX1-207ENST00000557820 ARHGEF25Q86VW2 580 aa8.82□□□□□ -1
PKNOX1-207ENST00000557820 FOXD4L1Q9NU39 408 aa8.82□□□□□ -1
PKNOX1-207ENST00000557820 AATKQ6ZMQ8 1374 aa8.82□□□□□ -1
PKNOX1-207ENST00000557820 RGPD5Q99666 1765 aa8.81□□□□□ -1
PKNOX1-207ENST00000557820 DSG3P32926 999 aa8.81□□□□□ -1
PKNOX1-207ENST00000557820 KCNH5Q8NCM2 988 aa8.81□□□□□ -1
PKNOX1-207ENST00000557820 CSB-PGBD3P0DP91 1061 aa8.8□□□□□ -1
PKNOX1-207ENST00000557820 CDCA8Q53HL2 280 aa8.8□□□□□ -1
PKNOX1-207ENST00000557820 TOM1L2Q6ZVM7 507 aa8.8□□□□□ -1
PKNOX1-207ENST00000557820 KRT27Q7Z3Y8 459 aa8.8□□□□□ -1
PKNOX1-207ENST00000557820 LTV1Q96GA3 475 aaPredicted RBP8.8□□□□□ -1
PKNOX1-207ENST00000557820 LTN1O94822 1766 aa8.8□□□□□ -1
PKNOX1-207ENST00000557820 CRB1P82279 1406 aa8.8□□□□□ -1
PKNOX1-207ENST00000557820 FYB1O15117 783 aa8.79□□□□□ -1
PKNOX1-207ENST00000557820 ONECUT3O60422 494 aaPredicted RBP8.79□□□□□ -1
PKNOX1-207ENST00000557820 RRS1Q15050 365 aaKnown RBP8.79□□□□□ -1
PKNOX1-207ENST00000557820 TCP11L2Q8N4U5 519 aa8.79□□□□□ -1
PKNOX1-207ENST00000557820 COG3Q96JB2 828 aa8.79□□□□□ -1
PKNOX1-207ENST00000557820 KIF20BQ96Q89 1820 aa8.79□□□□□ -1
PKNOX1-207ENST00000557820 MAP3K19Q56UN5 1328 aa8.79□□□□□ -1
PKNOX1-207ENST00000557820 WDR17Q8IZU2 1322 aa8.79□□□□□ -1
PKNOX1-207ENST00000557820 DEFB132Q7Z7B7 95 aa8.78□□□□□ -1
PKNOX1-207ENST00000557820 LRRC37A3O60309 1634 aa8.78□□□□□ -1
PKNOX1-207ENST00000557820 KIF7Q2M1P5 1343 aa8.78□□□□□ -1
PKNOX1-207ENST00000557820 PEAK1Q9H792 1746 aa8.77□□□□□ -1
PKNOX1-207ENST00000557820 SLC24A1O60721 1099 aa8.77□□□□□ -1.01
PKNOX1-207ENST00000557820 TNNT2P45379 298 aaPredicted RBP8.77□□□□□ -1.01
PKNOX1-207ENST00000557820 ANKRD24Q8TF21 1146 aa8.77□□□□□ -1.01
PKNOX1-207ENST00000557820 PANK3Q9H999 370 aa8.77□□□□□ -1.01
PKNOX1-207ENST00000557820 NLRP2Q9NX02 1062 aa8.77□□□□□ -1.01
PKNOX1-207ENST00000557820 WNK3Q9BYP7 1800 aa8.77□□□□□ -1.01
PKNOX1-207ENST00000557820 ERBB3P21860 1342 aa8.77□□□□□ -1.01
PKNOX1-207ENST00000557820 HOXC9P31274 260 aa8.76□□□□□ -1.01
PKNOX1-207ENST00000557820 CNGB1Q14028 1251 aaPredicted RBP8.76□□□□□ -1.01
PKNOX1-207ENST00000557820 BARGINQ6ZT62 677 aa8.76□□□□□ -1.01
PKNOX1-207ENST00000557820 ABCC6O95255 1503 aa8.75□□□□□ -1.01
PKNOX1-207ENST00000557820 DISP2A7MBM2 1401 aa8.75□□□□□ -1.01
PKNOX1-207ENST00000557820 BLMP54132 1417 aaPredicted RBP8.75□□□□□ -1.01
PKNOX1-207ENST00000557820 AMPHP49418 695 aa8.75□□□□□ -1.01
PKNOX1-207ENST00000557820 USHBP1Q8N6Y0 703 aa8.75□□□□□ -1.01
PKNOX1-207ENST00000557820 EMILIN1Q9Y6C2 1016 aa8.75□□□□□ -1.01
PKNOX1-207ENST00000557820 PARP4Q9UKK3 1724 aaKnown RBP8.74□□□□□ -1.01
PKNOX1-207ENST00000557820 PPM1GO15355 546 aaPredicted RBP8.74□□□□□ -1.01
PKNOX1-207ENST00000557820 TRIM37O94972 964 aa8.74□□□□□ -1.01
PKNOX1-207ENST00000557820 PTF1AQ7RTS3 328 aa8.74□□□□□ -1.01
PKNOX1-207ENST00000557820 IP6K1Q92551 441 aa8.74□□□□□ -1.01
PKNOX1-207ENST00000557820 CARD10Q9BWT7 1032 aa8.74□□□□□ -1.01
PKNOX1-207ENST00000557820 CCDC7Q96M83 1385 aa8.73□□□□□ -1.01
PKNOX1-207ENST00000557820 RGPD2P0DJD1 1756 aa8.73□□□□□ -1.01
PKNOX1-207ENST00000557820 PDE3BQ13370 1112 aa8.73□□□□□ -1.01
PKNOX1-207ENST00000557820 HSP90AB2PQ58FF8 381 aa8.73□□□□□ -1.01
PKNOX1-207ENST00000557820 THRAP3Q9Y2W1 955 aaKnown RBP8.73□□□□□ -1.01
PKNOX1-207ENST00000557820 TNS1Q9HBL0 1735 aaKnown RBP8.73□□□□□ -1.01
PKNOX1-207ENST00000557820 CGNL1Q0VF96 1302 aa8.73□□□□□ -1.01
PKNOX1-207ENST00000557820 WASHC2AQ641Q2 1341 aa8.73□□□□□ -1.01
PKNOX1-207ENST00000557820 FAM208AQ9UK61 1670 aaKnown RBP8.72□□□□□ -1.01
PKNOX1-207ENST00000557820 EN1Q05925 392 aaPredicted RBP8.72□□□□□ -1.01
PKNOX1-207ENST00000557820 DDB1Q16531 1140 aa8.72□□□□□ -1.01
PKNOX1-207ENST00000557820 MARCH10Q8NA82 808 aaPredicted RBP8.72□□□□□ -1.01
PKNOX1-207ENST00000557820 RTL1A6NKG5 1358 aa8.72□□□□□ -1.01
PKNOX1-207ENST00000557820 TNS2Q63HR2 1409 aa8.71□□□□□ -1.01
PKNOX1-207ENST00000557820 MEGF6O75095 1541 aa8.71□□□□□ -1.01
PKNOX1-207ENST00000557820 SF3B2Q13435 895 aaKnown RBP8.71□□□□□ -1.02
PKNOX1-207ENST00000557820 NBPF6Q5VWK0 638 aa8.71□□□□□ -1.02
PKNOX1-207ENST00000557820 NBPF4Q96M43 638 aa8.71□□□□□ -1.02
PKNOX1-207ENST00000557820 FLT4P35916 1363 aa8.71□□□□□ -1.02
PKNOX1-207ENST00000557820 ANKRD26Q9UPS8 1709 aa8.71□□□□□ -1.02
PKNOX1-207ENST00000557820 EP400Q96L91 3159 aa8.71□□□□□ -1.02
PKNOX1-207ENST00000557820 OVOS2A0A0G2JMS6 1433 aa8.71□□□□□ -1.02
PKNOX1-207ENST00000557820 IL2RBP14784 551 aa8.7□□□□□ -1.02
PKNOX1-207ENST00000557820 FAM196AQ6ZSG2 479 aa8.7□□□□□ -1.02
PKNOX1-207ENST00000557820 POLKQ9UBT6 870 aa8.7□□□□□ -1.02
PKNOX1-207ENST00000557820 RGPD1P0DJD0 1748 aa8.7□□□□□ -1.02
PKNOX1-207ENST00000557820 APBA3O96018 575 aa8.69□□□□□ -1.02
PKNOX1-207ENST00000557820 EZH2Q15910 746 aaKnown RBP8.69□□□□□ -1.02
PKNOX1-207ENST00000557820 CC2D1BQ5T0F9 858 aaKnown RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms