RNA–Protein interactions for RNA: ENST00000557349.5

TVP23C-CDRT4-204, Transcript of TVP23C-CDRT4 readthrough, humanhuman

TSL 2

Gene TVP23C-CDRT4, Length 1,005 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-CDRT4-204ENST00000557349 COL18A1P39060 1754 aa23.09■■□□□ 1.29
TVP23C-CDRT4-204ENST00000557349 KIF7Q2M1P5 1343 aa23.08■■□□□ 1.29
TVP23C-CDRT4-204ENST00000557349 FYB1O15117 783 aa23.08■■□□□ 1.29
TVP23C-CDRT4-204ENST00000557349 FAM98CQ17RN3 349 aaKnown RBP23.07■■□□□ 1.28
TVP23C-CDRT4-204ENST00000557349 LARP1Q6PKG0 1096 aaKnown RBP23.07■■□□□ 1.28
TVP23C-CDRT4-204ENST00000557349 USP35Q9P2H5 1018 aa23.07■■□□□ 1.28
TVP23C-CDRT4-204ENST00000557349 CGNL1Q0VF96 1302 aa23.07■■□□□ 1.28
TVP23C-CDRT4-204ENST00000557349 SPATA31A1Q5TZJ5 1347 aa23.07■■□□□ 1.28
TVP23C-CDRT4-204ENST00000557349 SEPT12Q8IYM1 358 aa23.06■■□□□ 1.28
TVP23C-CDRT4-204ENST00000557349 CSB-PGBD3P0DP91 1061 aa23.04■■□□□ 1.28
TVP23C-CDRT4-204ENST00000557349 PANK3Q9H999 370 aa23.04■■□□□ 1.28
TVP23C-CDRT4-204ENST00000557349 AXIN2Q9Y2T1 843 aa23.04■■□□□ 1.28
TVP23C-CDRT4-204ENST00000557349 CRB1P82279 1406 aa23.04■■□□□ 1.28
TVP23C-CDRT4-204ENST00000557349 RGPD5Q99666 1765 aa23.03■■□□□ 1.28
TVP23C-CDRT4-204ENST00000557349 TOM1L2Q6ZVM7 507 aa23.02■■□□□ 1.28
TVP23C-CDRT4-204ENST00000557349 WDR17Q8IZU2 1322 aa23.02■■□□□ 1.28
TVP23C-CDRT4-204ENST00000557349 THSD7AQ9UPZ6 1657 aa23.01■■□□□ 1.27
TVP23C-CDRT4-204ENST00000557349 ONECUT3O60422 494 aaPredicted RBP23.01■■□□□ 1.27
TVP23C-CDRT4-204ENST00000557349 TCP11L2Q8N4U5 519 aa23■■□□□ 1.27
TVP23C-CDRT4-204ENST00000557349 BRWD3Q6RI45 1802 aa23■■□□□ 1.27
TVP23C-CDRT4-204ENST00000557349 MAP3K19Q56UN5 1328 aa23■■□□□ 1.27
TVP23C-CDRT4-204ENST00000557349 CCDC7Q96M83 1385 aa23■■□□□ 1.27
TVP23C-CDRT4-204ENST00000557349 BLMP54132 1417 aaPredicted RBP22.99■■□□□ 1.27
TVP23C-CDRT4-204ENST00000557349 AMPHP49418 695 aa22.98■■□□□ 1.27
TVP23C-CDRT4-204ENST00000557349 ANKRD26Q9UPS8 1709 aa22.97■■□□□ 1.27
TVP23C-CDRT4-204ENST00000557349 FBLN1P23142 703 aa22.97■■□□□ 1.27
TVP23C-CDRT4-204ENST00000557349 RRS1Q15050 365 aaKnown RBP22.97■■□□□ 1.27
TVP23C-CDRT4-204ENST00000557349 BARGINQ6ZT62 677 aa22.97■■□□□ 1.27
TVP23C-CDRT4-204ENST00000557349 THRAP3Q9Y2W1 955 aaKnown RBP22.97■■□□□ 1.27
TVP23C-CDRT4-204ENST00000557349 ERBB3P21860 1342 aa22.97■■□□□ 1.27
TVP23C-CDRT4-204ENST00000557349 WASHC2AQ641Q2 1341 aa22.97■■□□□ 1.27
TVP23C-CDRT4-204ENST00000557349 RTL1A6NKG5 1358 aa22.97■■□□□ 1.27
TVP23C-CDRT4-204ENST00000557349 KRT27Q7Z3Y8 459 aa22.96■■□□□ 1.27
TVP23C-CDRT4-204ENST00000557349 IP6K1Q92551 441 aa22.96■■□□□ 1.27
TVP23C-CDRT4-204ENST00000557349 KNSTRNQ9Y448 316 aa22.96■■□□□ 1.27
TVP23C-CDRT4-204ENST00000557349 NSD2O96028 1365 aa22.95■■□□□ 1.26
TVP23C-CDRT4-204ENST00000557349 ANKRD24Q8TF21 1146 aa22.95■■□□□ 1.26
TVP23C-CDRT4-204ENST00000557349 HOXC9P31274 260 aa22.94■■□□□ 1.26
TVP23C-CDRT4-204ENST00000557349 UPF1Q92900 1129 aaKnown RBP eCLIP22.94■■□□□ 1.26
TVP23C-CDRT4-204ENST00000557349 CARD10Q9BWT7 1032 aa22.93■■□□□ 1.26
TVP23C-CDRT4-204ENST00000557349 WNK3Q9BYP7 1800 aa22.93■■□□□ 1.26
TVP23C-CDRT4-204ENST00000557349 LTV1Q96GA3 475 aaPredicted RBP22.92■■□□□ 1.26
TVP23C-CDRT4-204ENST00000557349 NLRP2Q9NX02 1062 aa22.92■■□□□ 1.26
TVP23C-CDRT4-204ENST00000557349 FAM208AQ9UK61 1670 aaKnown RBP22.91■■□□□ 1.26
TVP23C-CDRT4-204ENST00000557349 PARP4Q9UKK3 1724 aaKnown RBP22.91■■□□□ 1.26
TVP23C-CDRT4-204ENST00000557349 FLT4P35916 1363 aa22.9■■□□□ 1.26
TVP23C-CDRT4-204ENST00000557349 SMG6Q86US8 1419 aaKnown RBP22.9■■□□□ 1.26
TVP23C-CDRT4-204ENST00000557349 PEAK1Q9H792 1746 aa22.89■■□□□ 1.26
TVP23C-CDRT4-204ENST00000557349 TNNT2P45379 298 aaPredicted RBP22.89■■□□□ 1.25
TVP23C-CDRT4-204ENST00000557349 LRRC37A3O60309 1634 aa22.89■■□□□ 1.25
TVP23C-CDRT4-204ENST00000557349 KIF24Q5T7B8 1368 aa22.89■■□□□ 1.25
TVP23C-CDRT4-204ENST00000557349 PPM1GO15355 546 aaPredicted RBP22.88■■□□□ 1.25
TVP23C-CDRT4-204ENST00000557349 ZEB1P37275 1124 aaPredicted RBP22.88■■□□□ 1.25
TVP23C-CDRT4-204ENST00000557349 PDE3BQ13370 1112 aa22.88■■□□□ 1.25
TVP23C-CDRT4-204ENST00000557349 EMILIN1Q9Y6C2 1016 aa22.88■■□□□ 1.25
TVP23C-CDRT4-204ENST00000557349 CDCA7Q9BWT1 371 aaPredicted RBP22.87■■□□□ 1.25
TVP23C-CDRT4-204ENST00000557349 MORC1Q86VD1 984 aa22.86■■□□□ 1.25
TVP23C-CDRT4-204ENST00000557349 FAM182BQ5T319 152 aa22.85■■□□□ 1.25
TVP23C-CDRT4-204ENST00000557349 INSRP06213 1382 aa22.85■■□□□ 1.25
TVP23C-CDRT4-204ENST00000557349 DISP2A7MBM2 1401 aa22.84■■□□□ 1.25
TVP23C-CDRT4-204ENST00000557349 EP400Q96L91 3159 aa22.84■■□□□ 1.25
TVP23C-CDRT4-204ENST00000557349 DDB1Q16531 1140 aa22.84■■□□□ 1.25
TVP23C-CDRT4-204ENST00000557349 AMER1Q5JTC6 1135 aaPredicted RBP22.84■■□□□ 1.25
TVP23C-CDRT4-204ENST00000557349 HSP90AB2PQ58FF8 381 aa22.83■■□□□ 1.25
TVP23C-CDRT4-204ENST00000557349 MAP2P11137 1827 aaKnown RBP22.82■■□□□ 1.24
TVP23C-CDRT4-204ENST00000557349 IL2RBP14784 551 aa22.81■■□□□ 1.24
TVP23C-CDRT4-204ENST00000557349 POLKQ9UBT6 870 aa22.81■■□□□ 1.24
TVP23C-CDRT4-204ENST00000557349 TNS2Q63HR2 1409 aa22.81■■□□□ 1.24
TVP23C-CDRT4-204ENST00000557349 PER1O15534 1290 aaPredicted RBP22.8■■□□□ 1.24
TVP23C-CDRT4-204ENST00000557349 SF3B2Q13435 895 aaKnown RBP22.8■■□□□ 1.24
TVP23C-CDRT4-204ENST00000557349 CC2D1BQ5T0F9 858 aaKnown RBP22.8■■□□□ 1.24
TVP23C-CDRT4-204ENST00000557349 CCDC125Q86Z20 511 aa22.8■■□□□ 1.24
TVP23C-CDRT4-204ENST00000557349 RGPD2P0DJD1 1756 aa22.8■■□□□ 1.24
TVP23C-CDRT4-204ENST00000557349 FAM196AQ6ZSG2 479 aa22.79■■□□□ 1.24
TVP23C-CDRT4-204ENST00000557349 OVOS2A0A0G2JMS6 1433 aa22.79■■□□□ 1.24
TVP23C-CDRT4-204ENST00000557349 CNGB1Q14028 1251 aaPredicted RBP22.78■■□□□ 1.24
TVP23C-CDRT4-204ENST00000557349 EXOC5O00471 708 aa22.77■■□□□ 1.24
TVP23C-CDRT4-204ENST00000557349 RGPD1P0DJD0 1748 aa22.77■■□□□ 1.23
TVP23C-CDRT4-204ENST00000557349 NBPF6Q5VWK0 638 aa22.76■■□□□ 1.23
TVP23C-CDRT4-204ENST00000557349 USHBP1Q8N6Y0 703 aa22.76■■□□□ 1.23
TVP23C-CDRT4-204ENST00000557349 NBPF4Q96M43 638 aa22.76■■□□□ 1.23
TVP23C-CDRT4-204ENST00000557349 NPC1L1Q9UHC9 1359 aa22.76■■□□□ 1.23
TVP23C-CDRT4-204ENST00000557349 MEGF6O75095 1541 aa22.72■■□□□ 1.23
TVP23C-CDRT4-204ENST00000557349 TRIM37O94972 964 aa22.72■■□□□ 1.23
TVP23C-CDRT4-204ENST00000557349 TNS1Q9HBL0 1735 aaKnown RBP22.71■■□□□ 1.23
TVP23C-CDRT4-204ENST00000557349 MARCH10Q8NA82 808 aaPredicted RBP22.71■■□□□ 1.23
TVP23C-CDRT4-204ENST00000557349 RAPGEF4Q8WZA2 1011 aa22.71■■□□□ 1.23
TVP23C-CDRT4-204ENST00000557349 BAG6P46379 1132 aa22.7■■□□□ 1.22
TVP23C-CDRT4-204ENST00000557349 EIF4A2Q14240 407 aaKnown RBP22.69■■□□□ 1.22
TVP23C-CDRT4-204ENST00000557349 DEFB132Q7Z7B7 95 aa22.68■■□□□ 1.22
TVP23C-CDRT4-204ENST00000557349 TATP17735 454 aaPredicted RBP22.67■■□□□ 1.22
TVP23C-CDRT4-204ENST00000557349 NCAPD2Q15021 1401 aa22.66■■□□□ 1.22
TVP23C-CDRT4-204ENST00000557349 EYA1Q99502 592 aa22.66■■□□□ 1.22
TVP23C-CDRT4-204ENST00000557349 BCL9O00512 1426 aa22.65■■□□□ 1.22
TVP23C-CDRT4-204ENST00000557349 MTHFSP49914 203 aa22.65■■□□□ 1.22
TVP23C-CDRT4-204ENST00000557349 ZCRB1Q8TBF4 217 aaKnown RBP22.65■■□□□ 1.22
TVP23C-CDRT4-204ENST00000557349 DDX54Q8TDD1 881 aaKnown RBP22.65■■□□□ 1.22
TVP23C-CDRT4-204ENST00000557349 SBF2Q86WG5 1849 aa22.64■■□□□ 1.21
TVP23C-CDRT4-204ENST00000557349 SHANK3Q9BYB0 1731 aa22.63■■□□□ 1.21
TVP23C-CDRT4-204ENST00000557349 APBA3O96018 575 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms