RNA–Protein interactions for RNA: ENST00000556674.1

TGFB3-206, Transcript of transforming growth factor beta 3, humanhuman

TSL 3

Gene TGFB3, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-206ENST00000556674 USP35Q9P2H5 1018 aa22.54■■□□□ 1.2
TGFB3-206ENST00000556674 EDC4Q6P2E9 1401 aaKnown RBP22.54■■□□□ 1.2
TGFB3-206ENST00000556674 GCP02774 474 aa22.53■■□□□ 1.2
TGFB3-206ENST00000556674 EIF4G2P78344 907 aaKnown RBP eCLIP22.53■■□□□ 1.2
TGFB3-206ENST00000556674 PPP1R1BQ9UD71 204 aaPredicted RBP22.52■■□□□ 1.2
TGFB3-206ENST00000556674 ZC3H6P61129 1189 aaKnown RBP22.51■■□□□ 1.19
TGFB3-206ENST00000556674 PDE3BQ13370 1112 aa22.51■■□□□ 1.19
TGFB3-206ENST00000556674 KCNH5Q8NCM2 988 aa22.51■■□□□ 1.19
TGFB3-206ENST00000556674 SPON1Q9HCB6 807 aa22.51■■□□□ 1.19
TGFB3-206ENST00000556674 A0A1W2PP64 1363 aa22.5■■□□□ 1.19
TGFB3-206ENST00000556674 ANKRD36BQ8N2N9 1353 aa22.5■■□□□ 1.19
TGFB3-206ENST00000556674 KCNQ2O43526 872 aa22.49■■□□□ 1.19
TGFB3-206ENST00000556674 BARGINQ6ZT62 677 aa22.49■■□□□ 1.19
TGFB3-206ENST00000556674 USP54Q70EL1 1684 aa22.49■■□□□ 1.19
TGFB3-206ENST00000556674 DCAF8L1A6NGE4 600 aa22.48■■□□□ 1.19
TGFB3-206ENST00000556674 USP31Q70CQ4 1352 aa22.48■■□□□ 1.19
TGFB3-206ENST00000556674 EVA1CP58658 441 aa22.46■■□□□ 1.19
TGFB3-206ENST00000556674 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.45■■□□□ 1.18
TGFB3-206ENST00000556674 LMO7Q8WWI1 1683 aa22.45■■□□□ 1.18
TGFB3-206ENST00000556674 CAMTA1Q9Y6Y1 1673 aa22.45■■□□□ 1.18
TGFB3-206ENST00000556674 LARP1Q6PKG0 1096 aaKnown RBP22.44■■□□□ 1.18
TGFB3-206ENST00000556674 AATKQ6ZMQ8 1374 aa22.44■■□□□ 1.18
TGFB3-206ENST00000556674 ABCC6O95255 1503 aa22.42■■□□□ 1.18
TGFB3-206ENST00000556674 HSPA5P11021 654 aaKnown RBP22.42■■□□□ 1.18
TGFB3-206ENST00000556674 TCP11L2Q8N4U5 519 aa22.42■■□□□ 1.18
TGFB3-206ENST00000556674 NME9Q86XW9 330 aa22.4■■□□□ 1.18
TGFB3-206ENST00000556674 NFAT5O94916 1531 aa22.4■■□□□ 1.18
TGFB3-206ENST00000556674 ARHGEF25Q86VW2 580 aa22.39■■□□□ 1.17
TGFB3-206ENST00000556674 MYOM1P52179 1685 aa22.39■■□□□ 1.17
TGFB3-206ENST00000556674 OVOS2A0A0J9YW53 1432 aa22.39■■□□□ 1.17
TGFB3-206ENST00000556674 OVOS2Q6IE36 1432 aa22.39■■□□□ 1.17
TGFB3-206ENST00000556674 COL5A2P05997 1499 aaPredicted RBP22.38■■□□□ 1.17
TGFB3-206ENST00000556674 PARP4Q9UKK3 1724 aaKnown RBP22.37■■□□□ 1.17
TGFB3-206ENST00000556674 COG3Q96JB2 828 aa22.36■■□□□ 1.17
TGFB3-206ENST00000556674 THRAP3Q9Y2W1 955 aaKnown RBP22.36■■□□□ 1.17
TGFB3-206ENST00000556674 ZBTB7CA1YPR0 619 aa22.35■■□□□ 1.17
TGFB3-206ENST00000556674 ANO8Q9HCE9 1232 aaPredicted RBP22.35■■□□□ 1.17
TGFB3-206ENST00000556674 COL18A1P39060 1754 aa22.35■■□□□ 1.17
TGFB3-206ENST00000556674 CASZ1Q86V15 1759 aa22.35■■□□□ 1.17
TGFB3-206ENST00000556674 PEAK1Q9H792 1746 aa22.34■■□□□ 1.17
TGFB3-206ENST00000556674 PDGFDQ9GZP0 370 aaPredicted RBP22.34■■□□□ 1.17
TGFB3-206ENST00000556674 RGPD3A6NKT7 1758 aaPredicted RBP22.34■■□□□ 1.17
TGFB3-206ENST00000556674 RGPD4Q7Z3J3 1758 aa22.34■■□□□ 1.17
TGFB3-206ENST00000556674 OVOS2A0A0G2JMS6 1433 aa22.33■■□□□ 1.17
TGFB3-206ENST00000556674 CRB1P82279 1406 aa22.33■■□□□ 1.17
TGFB3-206ENST00000556674 PLSCR1O15162 318 aa22.33■■□□□ 1.17
TGFB3-206ENST00000556674 SOX12O15370 315 aa22.33■■□□□ 1.17
TGFB3-206ENST00000556674 ZNF784Q8NCA9 323 aaPredicted RBP22.33■■□□□ 1.17
TGFB3-206ENST00000556674 C11orf95C9JLR9 678 aaPredicted RBP22.32■■□□□ 1.16
TGFB3-206ENST00000556674 WDR17Q8IZU2 1322 aa22.31■■□□□ 1.16
TGFB3-206ENST00000556674 ZBTB7AO95365 584 aa22.3■■□□□ 1.16
TGFB3-206ENST00000556674 SBF2Q86WG5 1849 aa22.29■■□□□ 1.16
TGFB3-206ENST00000556674 KIF20BQ96Q89 1820 aa22.29■■□□□ 1.16
TGFB3-206ENST00000556674 FYB1O15117 783 aa22.29■■□□□ 1.16
TGFB3-206ENST00000556674 PTF1AQ7RTS3 328 aa22.29■■□□□ 1.16
TGFB3-206ENST00000556674 LTN1O94822 1766 aa22.29■■□□□ 1.16
TGFB3-206ENST00000556674 LRRC37A3O60309 1634 aa22.28■■□□□ 1.16
TGFB3-206ENST00000556674 POLR3GLQ9BT43 218 aa22.28■■□□□ 1.16
TGFB3-206ENST00000556674 AXIN2Q9Y2T1 843 aa22.28■■□□□ 1.16
TGFB3-206ENST00000556674 NSD3Q9BZ95 1437 aa22.28■■□□□ 1.16
TGFB3-206ENST00000556674 PTGER2P43116 358 aa22.27■■□□□ 1.16
TGFB3-206ENST00000556674 TOM1L2Q6ZVM7 507 aa22.27■■□□□ 1.16
TGFB3-206ENST00000556674 BCL11BQ9C0K0 894 aaPredicted RBP22.27■■□□□ 1.16
TGFB3-206ENST00000556674 CGNL1Q0VF96 1302 aa22.27■■□□□ 1.16
TGFB3-206ENST00000556674 PROM2Q8N271 834 aa22.26■■□□□ 1.15
TGFB3-206ENST00000556674 CARD14Q9BXL6 1004 aa22.26■■□□□ 1.15
TGFB3-206ENST00000556674 CSB-PGBD3P0DP91 1061 aa22.25■■□□□ 1.15
TGFB3-206ENST00000556674 ATF5Q9Y2D1 282 aaPredicted RBP22.25■■□□□ 1.15
TGFB3-206ENST00000556674 SENP3-EIF4A1A0A087X0R7 540 aa22.24■■□□□ 1.15
TGFB3-206ENST00000556674 DDB1Q16531 1140 aa22.24■■□□□ 1.15
TGFB3-206ENST00000556674 CDCA7Q9BWT1 371 aaPredicted RBP22.24■■□□□ 1.15
TGFB3-206ENST00000556674 GGNBP2Q9H3C7 697 aa22.24■■□□□ 1.15
TGFB3-206ENST00000556674 RGPD5Q99666 1765 aa22.24■■□□□ 1.15
TGFB3-206ENST00000556674 CARD10Q9BWT7 1032 aa22.23■■□□□ 1.15
TGFB3-206ENST00000556674 ERBB3P21860 1342 aa22.23■■□□□ 1.15
TGFB3-206ENST00000556674 RTL1A6NKG5 1358 aa22.23■■□□□ 1.15
TGFB3-206ENST00000556674 CCDC7Q96M83 1385 aa22.23■■□□□ 1.15
TGFB3-206ENST00000556674 IP6K1Q92551 441 aa22.22■■□□□ 1.15
TGFB3-206ENST00000556674 SYT17Q9BSW7 474 aa22.22■■□□□ 1.15
TGFB3-206ENST00000556674 FHDC1Q9C0D6 1143 aaPredicted RBP22.22■■□□□ 1.15
TGFB3-206ENST00000556674 KIF24Q5T7B8 1368 aa22.22■■□□□ 1.15
TGFB3-206ENST00000556674 UTRNP46939 3433 aa22.22■■□□□ 1.15
TGFB3-206ENST00000556674 FAM208AQ9UK61 1670 aaKnown RBP22.2■■□□□ 1.15
TGFB3-206ENST00000556674 MARCH10Q8NA82 808 aaPredicted RBP22.2■■□□□ 1.14
TGFB3-206ENST00000556674 MAP3K19Q56UN5 1328 aa22.2■■□□□ 1.14
TGFB3-206ENST00000556674 AMPHP49418 695 aa22.19■■□□□ 1.14
TGFB3-206ENST00000556674 C1QTNF8P60827 252 aa22.19■■□□□ 1.14
TGFB3-206ENST00000556674 STK32BQ9NY57 414 aa22.19■■□□□ 1.14
TGFB3-206ENST00000556674 NSD2O96028 1365 aa22.19■■□□□ 1.14
TGFB3-206ENST00000556674 KIF7Q2M1P5 1343 aa22.18■■□□□ 1.14
TGFB3-206ENST00000556674 ANKRD24Q8TF21 1146 aa22.18■■□□□ 1.14
TGFB3-206ENST00000556674 PANK3Q9H999 370 aa22.18■■□□□ 1.14
TGFB3-206ENST00000556674 WNK3Q9BYP7 1800 aa22.17■■□□□ 1.14
TGFB3-206ENST00000556674 SLC15A2Q16348 729 aa22.17■■□□□ 1.14
TGFB3-206ENST00000556674 TXNRD1Q16881 649 aa22.17■■□□□ 1.14
TGFB3-206ENST00000556674 BCL9O00512 1426 aa22.16■■□□□ 1.14
TGFB3-206ENST00000556674 HOXC9P31274 260 aa22.16■■□□□ 1.14
TGFB3-206ENST00000556674 ANKRD26Q9UPS8 1709 aa22.16■■□□□ 1.14
TGFB3-206ENST00000556674 SGIP1Q9BQI5 828 aa22.15■■□□□ 1.14
TGFB3-206ENST00000556674 MTFR1LQ9H019 292 aa22.15■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms