RNA–Protein interactions for RNA: ENST00000556360.1

PCNX4-212, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-212ENST00000556360 BCANQ96GW7 911 aa10.85□□□□□ -0.67
PCNX4-212ENST00000556360 CARD14Q9BXL6 1004 aa10.85□□□□□ -0.67
PCNX4-212ENST00000556360 CDV3Q9UKY7 258 aaKnown RBP10.85□□□□□ -0.67
PCNX4-212ENST00000556360 SOS2Q07890 1332 aaPredicted RBP10.84□□□□□ -0.67
PCNX4-212ENST00000556360 UPP2O95045 317 aa10.84□□□□□ -0.67
PCNX4-212ENST00000556360 ARHGAP9Q9BRR9 750 aa10.84□□□□□ -0.67
PCNX4-212ENST00000556360 MAN1A2O60476 641 aa10.83□□□□□ -0.68
PCNX4-212ENST00000556360 BMP2P12643 396 aa10.83□□□□□ -0.68
PCNX4-212ENST00000556360 OCSTAMPQ9BR26 566 aa10.83□□□□□ -0.68
PCNX4-212ENST00000556360 TSEN34Q9BSV6 310 aaKnown RBP10.83□□□□□ -0.68
PCNX4-212ENST00000556360 GPSM3Q9Y4H4 160 aa10.83□□□□□ -0.68
PCNX4-212ENST00000556360 NR6A1Q15406 480 aa10.82□□□□□ -0.68
PCNX4-212ENST00000556360 PPP1R26Q5T8A7 1209 aaPredicted RBP10.82□□□□□ -0.68
PCNX4-212ENST00000556360 Q6ZVU0 165 aa10.81□□□□□ -0.68
PCNX4-212ENST00000556360 ZSCAN1Q8NBB4 408 aa10.81□□□□□ -0.68
PCNX4-212ENST00000556360 SLC10A4Q96EP9 437 aa10.81□□□□□ -0.68
PCNX4-212ENST00000556360 DNMT3LQ9UJW3 386 aa10.81□□□□□ -0.68
PCNX4-212ENST00000556360 KCTD15Q96SI1 283 aaPredicted RBP10.8□□□□□ -0.68
PCNX4-212ENST00000556360 PGPEP1Q9NXJ5 209 aa10.8□□□□□ -0.68
PCNX4-212ENST00000556360 FAM181BA6NEQ2 426 aa10.78□□□□□ -0.68
PCNX4-212ENST00000556360 AP1G2O75843 785 aa10.78□□□□□ -0.68
PCNX4-212ENST00000556360 PTK2Q05397 1052 aa10.78□□□□□ -0.68
PCNX4-212ENST00000556360 PPFIA3O75145 1194 aa10.77□□□□□ -0.69
PCNX4-212ENST00000556360 DHX9Q08211 1270 aaKnown RBP10.77□□□□□ -0.69
PCNX4-212ENST00000556360 ZBTB33Q86T24 672 aa10.77□□□□□ -0.69
PCNX4-212ENST00000556360 GOPCQ9HD26 462 aa10.77□□□□□ -0.69
PCNX4-212ENST00000556360 SPINT1O43278 529 aa10.76□□□□□ -0.69
PCNX4-212ENST00000556360 USP17L8P0C7I0 530 aa10.76□□□□□ -0.69
PCNX4-212ENST00000556360 INTS6LQ5JSJ4 861 aaKnown RBP10.76□□□□□ -0.69
PCNX4-212ENST00000556360 HMX1Q9NP08 348 aaPredicted RBP10.76□□□□□ -0.69
PCNX4-212ENST00000556360 CBLBQ13191 982 aa10.75□□□□□ -0.69
PCNX4-212ENST00000556360 ADAM32Q8TC27 787 aa10.75□□□□□ -0.69
PCNX4-212ENST00000556360 EPS8L1Q8TE68 723 aa10.75□□□□□ -0.69
PCNX4-212ENST00000556360 TTLL8A6PVC2 850 aa10.74□□□□□ -0.69
PCNX4-212ENST00000556360 RFC5P40937 340 aa10.74□□□□□ -0.69
PCNX4-212ENST00000556360 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.74□□□□□ -0.69
PCNX4-212ENST00000556360 PNMA1Q8ND90 353 aa10.74□□□□□ -0.69
PCNX4-212ENST00000556360 NBPF20Q3BBV1 942 aa10.72□□□□□ -0.69
PCNX4-212ENST00000556360 TRIM34Q9BYJ4 488 aa10.7□□□□□ -0.7
PCNX4-212ENST00000556360 ESPNB1AK53 854 aa10.69□□□□□ -0.7
PCNX4-212ENST00000556360 PTSQ03393 145 aa10.69□□□□□ -0.7
PCNX4-212ENST00000556360 ATP1B4Q9UN42 357 aaPredicted RBP10.69□□□□□ -0.7
PCNX4-212ENST00000556360 TMEM259Q4ZIN3 620 aa10.67□□□□□ -0.7
PCNX4-212ENST00000556360 NANOS1Q8WY41 292 aaKnown RBP10.67□□□□□ -0.7
PCNX4-212ENST00000556360 PCMTD1Q96MG8 357 aaPredicted RBP10.66□□□□□ -0.7
PCNX4-212ENST00000556360 SLC35F4A4IF30 521 aa10.65□□□□□ -0.7
PCNX4-212ENST00000556360 LILRA1O75019 489 aa10.65□□□□□ -0.7
PCNX4-212ENST00000556360 SEPT12Q8IYM1 358 aa10.65□□□□□ -0.7
PCNX4-212ENST00000556360 ZNF784Q8NCA9 323 aaPredicted RBP10.65□□□□□ -0.7
PCNX4-212ENST00000556360 AGBL1Q96MI9 1066 aa10.65□□□□□ -0.7
PCNX4-212ENST00000556360 ADH1AP07327 375 aa10.64□□□□□ -0.71
PCNX4-212ENST00000556360 CTSOP43234 321 aaPredicted RBP10.64□□□□□ -0.71
PCNX4-212ENST00000556360 DZIP3Q86Y13 1208 aaKnown RBP10.64□□□□□ -0.71
PCNX4-212ENST00000556360 TMPRSS4Q9NRS4 437 aa10.64□□□□□ -0.71
PCNX4-212ENST00000556360 FIGNL2A6NMB9 653 aa10.63□□□□□ -0.71
PCNX4-212ENST00000556360 ERVH48-1M5A8F1 160 aa10.63□□□□□ -0.71
PCNX4-212ENST00000556360 RELBQ01201 579 aa10.63□□□□□ -0.71
PCNX4-212ENST00000556360 KRT76Q01546 638 aa10.63□□□□□ -0.71
PCNX4-212ENST00000556360 CCDC155Q8N6L0 562 aa10.63□□□□□ -0.71
PCNX4-212ENST00000556360 GPR161Q8N6U8 529 aaKnown RBP10.63□□□□□ -0.71
PCNX4-212ENST00000556360 KDF1Q8NAX2 398 aaPredicted RBP10.63□□□□□ -0.71
PCNX4-212ENST00000556360 SLC24A1O60721 1099 aa10.62□□□□□ -0.71
PCNX4-212ENST00000556360 ADD1P35611 737 aaKnown RBP10.62□□□□□ -0.71
PCNX4-212ENST00000556360 RNF217Q8TC41 542 aa10.62□□□□□ -0.71
PCNX4-212ENST00000556360 GJD4Q96KN9 370 aaPredicted RBP10.62□□□□□ -0.71
PCNX4-212ENST00000556360 INSM2Q96T92 566 aaPredicted RBP10.62□□□□□ -0.71
PCNX4-212ENST00000556360 ZBBXA8MT70 800 aa10.59□□□□□ -0.71
PCNX4-212ENST00000556360 SOCS7O14512 581 aa10.59□□□□□ -0.71
PCNX4-212ENST00000556360 PTGIRP43119 386 aa10.59□□□□□ -0.71
PCNX4-212ENST00000556360 ITGA6P23229 1130 aa10.58□□□□□ -0.72
PCNX4-212ENST00000556360 NEUROD2Q15784 382 aa10.58□□□□□ -0.72
PCNX4-212ENST00000556360 FOXD4L5Q5VV16 416 aaPredicted RBP10.58□□□□□ -0.72
PCNX4-212ENST00000556360 POLMQ9NP87 494 aaPredicted RBP10.58□□□□□ -0.72
PCNX4-212ENST00000556360 SENP3-EIF4A1A0A087X0R7 540 aa10.57□□□□□ -0.72
PCNX4-212ENST00000556360 RAB15P59190 212 aa10.57□□□□□ -0.72
PCNX4-212ENST00000556360 CCDC125Q86Z20 511 aa10.57□□□□□ -0.72
PCNX4-212ENST00000556360 TRIM52Q96A61 297 aa10.57□□□□□ -0.72
PCNX4-212ENST00000556360 ZNF395Q9H8N7 513 aaPredicted RBP10.57□□□□□ -0.72
PCNX4-212ENST00000556360 FBXO45P0C2W1 286 aa10.56□□□□□ -0.72
PCNX4-212ENST00000556360 IL27Q8NEV9 243 aa10.55□□□□□ -0.72
PCNX4-212ENST00000556360 CNTNAP3BQ96NU0 1288 aa10.55□□□□□ -0.72
PCNX4-212ENST00000556360 COL25A1Q9BXS0 654 aaPredicted RBP10.55□□□□□ -0.72
PCNX4-212ENST00000556360 CNTNAP3Q9BZ76 1288 aa10.55□□□□□ -0.72
PCNX4-212ENST00000556360 BANK1Q8NDB2 785 aa10.54□□□□□ -0.72
PCNX4-212ENST00000556360 GPR37L1O60883 481 aa10.53□□□□□ -0.72
PCNX4-212ENST00000556360 GIGYF1O75420 1035 aaPredicted RBP10.53□□□□□ -0.72
PCNX4-212ENST00000556360 BRPF1P55201 1214 aaPredicted RBP10.53□□□□□ -0.72
PCNX4-212ENST00000556360 RNFT1Q5M7Z0 435 aa10.53□□□□□ -0.72
PCNX4-212ENST00000556360 CYLDQ9NQC7 956 aa10.53□□□□□ -0.72
PCNX4-212ENST00000556360 SLURP2P0DP57 97 aa10.52□□□□□ -0.73
PCNX4-212ENST00000556360 RNF144AP50876 292 aaPredicted RBP10.52□□□□□ -0.73
PCNX4-212ENST00000556360 MCCD1P59942 119 aaPredicted RBP10.51□□□□□ -0.73
PCNX4-212ENST00000556360 KCNMA1Q12791 1236 aa10.51□□□□□ -0.73
PCNX4-212ENST00000556360 SV2AQ7L0J3 742 aa10.51□□□□□ -0.73
PCNX4-212ENST00000556360 LYSMD3Q7Z3D4 306 aa10.51□□□□□ -0.73
PCNX4-212ENST00000556360 VWA5B2Q8N398 1253 aa10.51□□□□□ -0.73
PCNX4-212ENST00000556360 PCDHB9Q9Y5E1 797 aa10.51□□□□□ -0.73
PCNX4-212ENST00000556360 GPC1P35052 558 aa10.5□□□□□ -0.73
PCNX4-212ENST00000556360 GSK3AP49840 483 aa10.5□□□□□ -0.73
PCNX4-212ENST00000556360 ERVK-9P63128 1117 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms