RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 KIF24Q5T7B8 1368 aa14.78□□□□□ -0.04
TMEM260-208ENST00000555905 MAP3K19Q56UN5 1328 aa14.78□□□□□ -0.04
TMEM260-208ENST00000555905 AMPHP49418 695 aa14.78□□□□□ -0.04
TMEM260-208ENST00000555905 COL22A1Q8NFW1 1626 aaPredicted RBP14.77□□□□□ -0.04
TMEM260-208ENST00000555905 CABLES1Q8TDN4 633 aa14.77□□□□□ -0.05
TMEM260-208ENST00000555905 ABCA3Q99758 1704 aa14.77□□□□□ -0.05
TMEM260-208ENST00000555905 RTL1A6NKG5 1358 aa14.76□□□□□ -0.05
TMEM260-208ENST00000555905 INSRP06213 1382 aa14.76□□□□□ -0.05
TMEM260-208ENST00000555905 FLT4P35916 1363 aa14.76□□□□□ -0.05
TMEM260-208ENST00000555905 PNPLA6Q8IY17 1366 aa14.76□□□□□ -0.05
TMEM260-208ENST00000555905 PEAK1Q9H792 1746 aa14.76□□□□□ -0.05
TMEM260-208ENST00000555905 ZBTB7CA1YPR0 619 aa14.76□□□□□ -0.05
TMEM260-208ENST00000555905 WDR43Q15061 677 aaKnown RBP eCLIP14.76□□□□□ -0.05
TMEM260-208ENST00000555905 PNISRQ8TF01 805 aaKnown RBP14.76□□□□□ -0.05
TMEM260-208ENST00000555905 DIAPH1O60610 1272 aaKnown RBP14.75□□□□□ -0.05
TMEM260-208ENST00000555905 FAM9BQ8IZU0 186 aa14.75□□□□□ -0.05
TMEM260-208ENST00000555905 NUDCQ9Y266 331 aa14.75□□□□□ -0.05
TMEM260-208ENST00000555905 ZC3H6P61129 1189 aaKnown RBP14.74□□□□□ -0.05
TMEM260-208ENST00000555905 ARHGEF25Q86VW2 580 aa14.74□□□□□ -0.05
TMEM260-208ENST00000555905 COL3A1P02461 1466 aaPredicted RBP14.74□□□□□ -0.05
TMEM260-208ENST00000555905 SHPRHQ149N8 1683 aa14.74□□□□□ -0.05
TMEM260-208ENST00000555905 HOXC9P31274 260 aa14.73□□□□□ -0.05
TMEM260-208ENST00000555905 IP6K1Q92551 441 aa14.73□□□□□ -0.05
TMEM260-208ENST00000555905 CPDO75976 1380 aa14.73□□□□□ -0.05
TMEM260-208ENST00000555905 JCADQ9P266 1359 aa14.73□□□□□ -0.05
TMEM260-208ENST00000555905 HSP90AB2PQ58FF8 381 aa14.72□□□□□ -0.05
TMEM260-208ENST00000555905 ABCC6O95255 1503 aa14.71□□□□□ -0.05
TMEM260-208ENST00000555905 HSPA1LP34931 641 aa14.71□□□□□ -0.05
TMEM260-208ENST00000555905 KIAA0232Q92628 1395 aa14.71□□□□□ -0.06
TMEM260-208ENST00000555905 BLMP54132 1417 aaPredicted RBP14.7□□□□□ -0.06
TMEM260-208ENST00000555905 U2SURPO15042 1029 aaKnown RBP14.7□□□□□ -0.06
TMEM260-208ENST00000555905 PRDM11Q9NQV5 511 aa14.7□□□□□ -0.06
TMEM260-208ENST00000555905 ZNF219Q9P2Y4 722 aaPredicted RBP14.7□□□□□ -0.06
TMEM260-208ENST00000555905 U2AF1L5P0DN76 240 aaPredicted RBP14.69□□□□□ -0.06
TMEM260-208ENST00000555905 IL13P35225 146 aa14.69□□□□□ -0.06
TMEM260-208ENST00000555905 U2AF1Q01081 240 aaKnown RBP eCLIP14.69□□□□□ -0.06
TMEM260-208ENST00000555905 EIF4A2Q14240 407 aaKnown RBP14.69□□□□□ -0.06
TMEM260-208ENST00000555905 ADAMTS8Q9UP79 889 aa14.69□□□□□ -0.06
TMEM260-208ENST00000555905 COL18A1P39060 1754 aa14.68□□□□□ -0.06
TMEM260-208ENST00000555905 RGPD5Q99666 1765 aa14.68□□□□□ -0.06
TMEM260-208ENST00000555905 NUTM2BA6NNL0 878 aaPredicted RBP14.67□□□□□ -0.06
TMEM260-208ENST00000555905 NUTM2EB1AL46 878 aaPredicted RBP14.67□□□□□ -0.06
TMEM260-208ENST00000555905 CHRNA2Q15822 529 aa14.67□□□□□ -0.06
TMEM260-208ENST00000555905 NUTM2AQ8IVF1 878 aaPredicted RBP14.67□□□□□ -0.06
TMEM260-208ENST00000555905 LTV1Q96GA3 475 aaPredicted RBP14.67□□□□□ -0.06
TMEM260-208ENST00000555905 SPATA31A6Q5VVP1 1343 aa14.66□□□□□ -0.06
TMEM260-208ENST00000555905 COL14A1Q05707 1796 aaKnown RBP14.66□□□□□ -0.06
TMEM260-208ENST00000555905 PNNQ9H307 717 aaKnown RBP14.66□□□□□ -0.06
TMEM260-208ENST00000555905 DSG3P32926 999 aa14.65□□□□□ -0.06
TMEM260-208ENST00000555905 ANKRD24Q8TF21 1146 aa14.65□□□□□ -0.06
TMEM260-208ENST00000555905 YTHDC1Q96MU7 727 aaKnown RBP14.65□□□□□ -0.06
TMEM260-208ENST00000555905 ATF5Q9Y2D1 282 aaPredicted RBP14.65□□□□□ -0.06
TMEM260-208ENST00000555905 AXIN2Q9Y2T1 843 aa14.65□□□□□ -0.06
TMEM260-208ENST00000555905 RGPD1P0DJD0 1748 aa14.65□□□□□ -0.06
TMEM260-208ENST00000555905 LMO7Q8WWI1 1683 aa14.65□□□□□ -0.06
TMEM260-208ENST00000555905 FAM83GA6ND36 823 aa14.64□□□□□ -0.07
TMEM260-208ENST00000555905 ADAMTS2O95450 1211 aa14.64□□□□□ -0.07
TMEM260-208ENST00000555905 FAM208AQ9UK61 1670 aaKnown RBP14.64□□□□□ -0.07
TMEM260-208ENST00000555905 FCHSD2O94868 740 aa14.63□□□□□ -0.07
TMEM260-208ENST00000555905 CSB-PGBD3P0DP91 1061 aa14.63□□□□□ -0.07
TMEM260-208ENST00000555905 FBXO41Q8TF61 875 aa14.63□□□□□ -0.07
TMEM260-208ENST00000555905 ERBB3P21860 1342 aa14.63□□□□□ -0.07
TMEM260-208ENST00000555905 CAMTA1Q9Y6Y1 1673 aa14.62□□□□□ -0.07
TMEM260-208ENST00000555905 NEFMP07197 916 aa14.62□□□□□ -0.07
TMEM260-208ENST00000555905 HMOX1P09601 288 aa14.62□□□□□ -0.07
TMEM260-208ENST00000555905 EVA1CP58658 441 aa14.62□□□□□ -0.07
TMEM260-208ENST00000555905 RUNDC1Q96C34 613 aa14.62□□□□□ -0.07
TMEM260-208ENST00000555905 EYA1Q99502 592 aa14.62□□□□□ -0.07
TMEM260-208ENST00000555905 RGPD2P0DJD1 1756 aa14.62□□□□□ -0.07
TMEM260-208ENST00000555905 IGSF1Q8N6C5 1336 aa14.62□□□□□ -0.07
TMEM260-208ENST00000555905 HNRNPUQ00839 825 aaKnown RBP eCLIP14.61□□□□□ -0.07
TMEM260-208ENST00000555905 SULT6B1Q6IMI4 303 aa14.61□□□□□ -0.07
TMEM260-208ENST00000555905 CCDC146Q8IYE0 955 aa14.61□□□□□ -0.07
TMEM260-208ENST00000555905 PLCH1Q4KWH8 1693 aa14.61□□□□□ -0.07
TMEM260-208ENST00000555905 MAPK8IP3Q9UPT6 1336 aa14.61□□□□□ -0.07
TMEM260-208ENST00000555905 RSPH6AQ9H0K4 717 aa14.6□□□□□ -0.07
TMEM260-208ENST00000555905 NLRP2Q9NX02 1062 aa14.6□□□□□ -0.07
TMEM260-208ENST00000555905 BTG4Q9NY30 223 aa14.6□□□□□ -0.07
TMEM260-208ENST00000555905 COL5A2P05997 1499 aaPredicted RBP14.6□□□□□ -0.07
TMEM260-208ENST00000555905 PRKAR2BP31323 418 aa14.59□□□□□ -0.07
TMEM260-208ENST00000555905 NBPF6Q5VWK0 638 aa14.59□□□□□ -0.07
TMEM260-208ENST00000555905 NBPF4Q96M43 638 aa14.59□□□□□ -0.07
TMEM260-208ENST00000555905 WDR17Q8IZU2 1322 aa14.59□□□□□ -0.07
TMEM260-208ENST00000555905 KDRP35968 1356 aa14.59□□□□□ -0.07
TMEM260-208ENST00000555905 NWD2Q9ULI1 1742 aa14.58□□□□□ -0.07
TMEM260-208ENST00000555905 ATXN8OSP0DMR3 200 aa14.58□□□□□ -0.08
TMEM260-208ENST00000555905 MEX3CQ5U5Q3 659 aaKnown RBP14.58□□□□□ -0.08
TMEM260-208ENST00000555905 AEBP1Q8IUX7 1158 aa14.58□□□□□ -0.08
TMEM260-208ENST00000555905 PLEKHF1Q96S99 279 aa14.58□□□□□ -0.08
TMEM260-208ENST00000555905 STRN4Q9NRL3 753 aa14.58□□□□□ -0.08
TMEM260-208ENST00000555905 LRP6O75581 1613 aa14.57□□□□□ -0.08
TMEM260-208ENST00000555905 TOM1L2Q6ZVM7 507 aa14.57□□□□□ -0.08
TMEM260-208ENST00000555905 USHBP1Q8N6Y0 703 aa14.57□□□□□ -0.08
TMEM260-208ENST00000555905 C8orf37Q96NL8 207 aa14.57□□□□□ -0.08
TMEM260-208ENST00000555905 APAF1O14727 1248 aa14.56□□□□□ -0.08
TMEM260-208ENST00000555905 NGLY1Q96IV0 654 aa14.56□□□□□ -0.08
TMEM260-208ENST00000555905 NCAPD2Q15021 1401 aa14.56□□□□□ -0.08
TMEM260-208ENST00000555905 NRAPQ86VF7 1730 aa14.55□□□□□ -0.08
TMEM260-208ENST00000555905 ABCB7O75027 752 aa14.55□□□□□ -0.08
TMEM260-208ENST00000555905 LARP1Q6PKG0 1096 aaKnown RBP14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms