RNA–Protein interactions for RNA: ENST00000554739.5

MTHFD1-208, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 3

Gene MTHFD1, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-208ENST00000554739 LMO7Q8WWI1 1683 aa17.81■□□□□ 0.44
MTHFD1-208ENST00000554739 WASHC2AQ641Q2 1341 aa17.81■□□□□ 0.44
MTHFD1-208ENST00000554739 NRAPQ86VF7 1730 aa17.81■□□□□ 0.44
MTHFD1-208ENST00000554739 CGNL1Q0VF96 1302 aa17.8■□□□□ 0.44
MTHFD1-208ENST00000554739 FAM98CQ17RN3 349 aaKnown RBP17.8■□□□□ 0.44
MTHFD1-208ENST00000554739 SEPT12Q8IYM1 358 aa17.8■□□□□ 0.44
MTHFD1-208ENST00000554739 COL5A2P05997 1499 aaPredicted RBP17.8■□□□□ 0.44
MTHFD1-208ENST00000554739 CCDC7Q96M83 1385 aa17.79■□□□□ 0.44
MTHFD1-208ENST00000554739 MAP3K19Q56UN5 1328 aa17.77■□□□□ 0.44
MTHFD1-208ENST00000554739 COL18A1P39060 1754 aa17.77■□□□□ 0.44
MTHFD1-208ENST00000554739 IP6K1Q92551 441 aa17.77■□□□□ 0.44
MTHFD1-208ENST00000554739 USP35Q9P2H5 1018 aa17.77■□□□□ 0.44
MTHFD1-208ENST00000554739 WDR17Q8IZU2 1322 aa17.76■□□□□ 0.43
MTHFD1-208ENST00000554739 BARGINQ6ZT62 677 aa17.76■□□□□ 0.43
MTHFD1-208ENST00000554739 CRB1P82279 1406 aa17.75■□□□□ 0.43
MTHFD1-208ENST00000554739 PER1O15534 1290 aaPredicted RBP17.75■□□□□ 0.43
MTHFD1-208ENST00000554739 TOM1L2Q6ZVM7 507 aa17.75■□□□□ 0.43
MTHFD1-208ENST00000554739 TCP11L2Q8N4U5 519 aa17.75■□□□□ 0.43
MTHFD1-208ENST00000554739 ZEB1P37275 1124 aaPredicted RBP17.74■□□□□ 0.43
MTHFD1-208ENST00000554739 RRS1Q15050 365 aaKnown RBP17.74■□□□□ 0.43
MTHFD1-208ENST00000554739 THRAP3Q9Y2W1 955 aaKnown RBP17.74■□□□□ 0.43
MTHFD1-208ENST00000554739 KNSTRNQ9Y448 316 aa17.74■□□□□ 0.43
MTHFD1-208ENST00000554739 ABCC6O95255 1503 aa17.73■□□□□ 0.43
MTHFD1-208ENST00000554739 CSB-PGBD3P0DP91 1061 aa17.73■□□□□ 0.43
MTHFD1-208ENST00000554739 HOXC9P31274 260 aa17.73■□□□□ 0.43
MTHFD1-208ENST00000554739 AMPHP49418 695 aa17.73■□□□□ 0.43
MTHFD1-208ENST00000554739 CARD10Q9BWT7 1032 aa17.73■□□□□ 0.43
MTHFD1-208ENST00000554739 ERBB3P21860 1342 aa17.72■□□□□ 0.43
MTHFD1-208ENST00000554739 A0A0G2JS52 829 aa17.72■□□□□ 0.43
MTHFD1-208ENST00000554739 MYT1Q01538 1121 aa17.72■□□□□ 0.43
MTHFD1-208ENST00000554739 AMER1Q5JTC6 1135 aaPredicted RBP17.72■□□□□ 0.43
MTHFD1-208ENST00000554739 ANKRD24Q8TF21 1146 aa17.72■□□□□ 0.43
MTHFD1-208ENST00000554739 KRT27Q7Z3Y8 459 aa17.71■□□□□ 0.43
MTHFD1-208ENST00000554739 UPF1Q92900 1129 aaKnown RBP eCLIP17.71■□□□□ 0.43
MTHFD1-208ENST00000554739 BLMP54132 1417 aaPredicted RBP17.71■□□□□ 0.43
MTHFD1-208ENST00000554739 EP400Q96L91 3159 aa17.7■□□□□ 0.42
MTHFD1-208ENST00000554739 NSD2O96028 1365 aa17.69■□□□□ 0.42
MTHFD1-208ENST00000554739 NLRP2Q9NX02 1062 aa17.69■□□□□ 0.42
MTHFD1-208ENST00000554739 EMILIN1Q9Y6C2 1016 aa17.69■□□□□ 0.42
MTHFD1-208ENST00000554739 RTL1A6NKG5 1358 aa17.68■□□□□ 0.42
MTHFD1-208ENST00000554739 TNNT2P45379 298 aaPredicted RBP17.68■□□□□ 0.42
MTHFD1-208ENST00000554739 HSP90AB2PQ58FF8 381 aa17.68■□□□□ 0.42
MTHFD1-208ENST00000554739 MORC1Q86VD1 984 aa17.68■□□□□ 0.42
MTHFD1-208ENST00000554739 LTV1Q96GA3 475 aaPredicted RBP17.68■□□□□ 0.42
MTHFD1-208ENST00000554739 POLKQ9UBT6 870 aa17.68■□□□□ 0.42
MTHFD1-208ENST00000554739 KIF20BQ96Q89 1820 aa17.68■□□□□ 0.42
MTHFD1-208ENST00000554739 KIF24Q5T7B8 1368 aa17.67■□□□□ 0.42
MTHFD1-208ENST00000554739 CDCA7Q9BWT1 371 aaPredicted RBP17.66■□□□□ 0.42
MTHFD1-208ENST00000554739 THSD7AQ9UPZ6 1657 aa17.66■□□□□ 0.42
MTHFD1-208ENST00000554739 LTN1O94822 1766 aa17.66■□□□□ 0.42
MTHFD1-208ENST00000554739 INSRP06213 1382 aa17.66■□□□□ 0.42
MTHFD1-208ENST00000554739 FLT4P35916 1363 aa17.66■□□□□ 0.42
MTHFD1-208ENST00000554739 PPM1GO15355 546 aaPredicted RBP17.65■□□□□ 0.42
MTHFD1-208ENST00000554739 RGPD5Q99666 1765 aa17.64■□□□□ 0.41
MTHFD1-208ENST00000554739 PDE3BQ13370 1112 aa17.64■□□□□ 0.41
MTHFD1-208ENST00000554739 FAM182BQ5T319 152 aa17.64■□□□□ 0.41
MTHFD1-208ENST00000554739 DISP2A7MBM2 1401 aa17.63■□□□□ 0.41
MTHFD1-208ENST00000554739 DDB1Q16531 1140 aa17.62■□□□□ 0.41
MTHFD1-208ENST00000554739 CC2D1BQ5T0F9 858 aaKnown RBP17.62■□□□□ 0.41
MTHFD1-208ENST00000554739 NBPF6Q5VWK0 638 aa17.62■□□□□ 0.41
MTHFD1-208ENST00000554739 NBPF4Q96M43 638 aa17.62■□□□□ 0.41
MTHFD1-208ENST00000554739 NPC1L1Q9UHC9 1359 aa17.62■□□□□ 0.41
MTHFD1-208ENST00000554739 CCDC125Q86Z20 511 aa17.61■□□□□ 0.41
MTHFD1-208ENST00000554739 PEAK1Q9H792 1746 aa17.61■□□□□ 0.41
MTHFD1-208ENST00000554739 BRWD3Q6RI45 1802 aa17.61■□□□□ 0.41
MTHFD1-208ENST00000554739 EXOC5O00471 708 aa17.6■□□□□ 0.41
MTHFD1-208ENST00000554739 IL2RBP14784 551 aa17.6■□□□□ 0.41
MTHFD1-208ENST00000554739 FAM196AQ6ZSG2 479 aa17.59■□□□□ 0.41
MTHFD1-208ENST00000554739 MARCH10Q8NA82 808 aaPredicted RBP17.58■□□□□ 0.4
MTHFD1-208ENST00000554739 SMG6Q86US8 1419 aaKnown RBP17.57■□□□□ 0.4
MTHFD1-208ENST00000554739 USHBP1Q8N6Y0 703 aa17.57■□□□□ 0.4
MTHFD1-208ENST00000554739 ANKRD26Q9UPS8 1709 aa17.57■□□□□ 0.4
MTHFD1-208ENST00000554739 CNGB1Q14028 1251 aaPredicted RBP17.56■□□□□ 0.4
MTHFD1-208ENST00000554739 EIF4A2Q14240 407 aaKnown RBP17.56■□□□□ 0.4
MTHFD1-208ENST00000554739 PARP4Q9UKK3 1724 aaKnown RBP17.55■□□□□ 0.4
MTHFD1-208ENST00000554739 EYA1Q99502 592 aa17.55■□□□□ 0.4
MTHFD1-208ENST00000554739 MTHFSP49914 203 aa17.54■□□□□ 0.4
MTHFD1-208ENST00000554739 LRRC37A3O60309 1634 aa17.52■□□□□ 0.4
MTHFD1-208ENST00000554739 TRIM37O94972 964 aa17.52■□□□□ 0.4
MTHFD1-208ENST00000554739 DDX10Q13206 875 aaKnown RBP17.52■□□□□ 0.4
MTHFD1-208ENST00000554739 RAPGEF4Q8WZA2 1011 aa17.52■□□□□ 0.4
MTHFD1-208ENST00000554739 MAP2P11137 1827 aaKnown RBP17.51■□□□□ 0.39
MTHFD1-208ENST00000554739 OVOS2A0A0G2JMS6 1433 aa17.51■□□□□ 0.39
MTHFD1-208ENST00000554739 SF3B2Q13435 895 aaKnown RBP17.51■□□□□ 0.39
MTHFD1-208ENST00000554739 TNS2Q63HR2 1409 aa17.51■□□□□ 0.39
MTHFD1-208ENST00000554739 ZCRB1Q8TBF4 217 aaKnown RBP17.51■□□□□ 0.39
MTHFD1-208ENST00000554739 FAM208AQ9UK61 1670 aaKnown RBP17.51■□□□□ 0.39
MTHFD1-208ENST00000554739 BCL9O00512 1426 aa17.5■□□□□ 0.39
MTHFD1-208ENST00000554739 NCAPD2Q15021 1401 aa17.5■□□□□ 0.39
MTHFD1-208ENST00000554739 TATP17735 454 aaPredicted RBP17.5■□□□□ 0.39
MTHFD1-208ENST00000554739 DEFB132Q7Z7B7 95 aa17.5■□□□□ 0.39
MTHFD1-208ENST00000554739 MEGF6O75095 1541 aa17.5■□□□□ 0.39
MTHFD1-208ENST00000554739 IL13P35225 146 aa17.49■□□□□ 0.39
MTHFD1-208ENST00000554739 DDX54Q8TDD1 881 aaKnown RBP17.49■□□□□ 0.39
MTHFD1-208ENST00000554739 IGSF1Q8N6C5 1336 aa17.48■□□□□ 0.39
MTHFD1-208ENST00000554739 WNK3Q9BYP7 1800 aa17.47■□□□□ 0.39
MTHFD1-208ENST00000554739 PTF1AQ7RTS3 328 aa17.47■□□□□ 0.39
MTHFD1-208ENST00000554739 RGPD2P0DJD1 1756 aa17.46■□□□□ 0.39
MTHFD1-208ENST00000554739 APBA3O96018 575 aa17.46■□□□□ 0.39
MTHFD1-208ENST00000554739 PPP2R1AP30153 589 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms