RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 BLMP54132 1417 aaPredicted RBP19.12■□□□□ 0.65
SHOX2-206ENST00000554685 CABLES1Q8TDN4 633 aa19.12■□□□□ 0.65
SHOX2-206ENST00000554685 LTN1O94822 1766 aa19.11■□□□□ 0.65
SHOX2-206ENST00000554685 SHPRHQ149N8 1683 aa19.11■□□□□ 0.65
SHOX2-206ENST00000554685 ZBTB7CA1YPR0 619 aa19.11■□□□□ 0.65
SHOX2-206ENST00000554685 U2SURPO15042 1029 aaKnown RBP19.11■□□□□ 0.65
SHOX2-206ENST00000554685 IL13P35225 146 aa19.11■□□□□ 0.65
SHOX2-206ENST00000554685 ZC3H6P61129 1189 aaKnown RBP19.11■□□□□ 0.65
SHOX2-206ENST00000554685 HSP90AB2PQ58FF8 381 aa19.11■□□□□ 0.65
SHOX2-206ENST00000554685 PNNQ9H307 717 aaKnown RBP19.11■□□□□ 0.65
SHOX2-206ENST00000554685 ADAMTS8Q9UP79 889 aa19.11■□□□□ 0.65
SHOX2-206ENST00000554685 U2AF1L5P0DN76 240 aaPredicted RBP19.1■□□□□ 0.65
SHOX2-206ENST00000554685 U2AF1Q01081 240 aaKnown RBP eCLIP19.1■□□□□ 0.65
SHOX2-206ENST00000554685 JCADQ9P266 1359 aa19.09■□□□□ 0.65
SHOX2-206ENST00000554685 ABCA3Q99758 1704 aa19.09■□□□□ 0.65
SHOX2-206ENST00000554685 EIF4A2Q14240 407 aaKnown RBP19.09■□□□□ 0.65
SHOX2-206ENST00000554685 KIAA0232Q92628 1395 aa19.08■□□□□ 0.65
SHOX2-206ENST00000554685 PRDM11Q9NQV5 511 aa19.08■□□□□ 0.64
SHOX2-206ENST00000554685 YTHDC1Q96MU7 727 aaKnown RBP19.07■□□□□ 0.64
SHOX2-206ENST00000554685 FCHSD2O94868 740 aa19.05■□□□□ 0.64
SHOX2-206ENST00000554685 NEFMP07197 916 aa19.05■□□□□ 0.64
SHOX2-206ENST00000554685 KCNA4P22459 653 aa19.04■□□□□ 0.64
SHOX2-206ENST00000554685 HNRNPUQ00839 825 aaKnown RBP eCLIP19.04■□□□□ 0.64
SHOX2-206ENST00000554685 RUNDC1Q96C34 613 aa19.04■□□□□ 0.64
SHOX2-206ENST00000554685 ANKRD24Q8TF21 1146 aa19.03■□□□□ 0.64
SHOX2-206ENST00000554685 SPATA31A6Q5VVP1 1343 aa19.02■□□□□ 0.64
SHOX2-206ENST00000554685 IGSF1Q8N6C5 1336 aa19.02■□□□□ 0.64
SHOX2-206ENST00000554685 NGEFQ8N5V2 710 aa19.02■□□□□ 0.64
SHOX2-206ENST00000554685 LTV1Q96GA3 475 aaPredicted RBP19.02■□□□□ 0.64
SHOX2-206ENST00000554685 ERBB3P21860 1342 aa19.01■□□□□ 0.63
SHOX2-206ENST00000554685 MAPK8IP3Q9UPT6 1336 aa19.01■□□□□ 0.63
SHOX2-206ENST00000554685 HSPA1LP34931 641 aa19.01■□□□□ 0.63
SHOX2-206ENST00000554685 CHRNA2Q15822 529 aa19.01■□□□□ 0.63
SHOX2-206ENST00000554685 COL18A1P39060 1754 aa19.01■□□□□ 0.63
SHOX2-206ENST00000554685 RGPD1P0DJD0 1748 aa19■□□□□ 0.63
SHOX2-206ENST00000554685 EYA1Q99502 592 aa19■□□□□ 0.63
SHOX2-206ENST00000554685 RSPH6AQ9H0K4 717 aa19■□□□□ 0.63
SHOX2-206ENST00000554685 AXIN2Q9Y2T1 843 aa19■□□□□ 0.63
SHOX2-206ENST00000554685 COL14A1Q05707 1796 aaKnown RBP18.99■□□□□ 0.63
SHOX2-206ENST00000554685 LMO7Q8WWI1 1683 aa18.99■□□□□ 0.63
SHOX2-206ENST00000554685 NCBP3Q53F19 620 aaKnown RBP18.99■□□□□ 0.63
SHOX2-206ENST00000554685 SULT6B1Q6IMI4 303 aa18.99■□□□□ 0.63
SHOX2-206ENST00000554685 CCDC146Q8IYE0 955 aa18.99■□□□□ 0.63
SHOX2-206ENST00000554685 FAM208AQ9UK61 1670 aaKnown RBP18.98■□□□□ 0.63
SHOX2-206ENST00000554685 KDRP35968 1356 aa18.98■□□□□ 0.63
SHOX2-206ENST00000554685 HMOX1P09601 288 aa18.98■□□□□ 0.63
SHOX2-206ENST00000554685 CSB-PGBD3P0DP91 1061 aa18.98■□□□□ 0.63
SHOX2-206ENST00000554685 ZBED9Q6R2W3 1325 aa18.98■□□□□ 0.63
SHOX2-206ENST00000554685 FAM83GA6ND36 823 aa18.97■□□□□ 0.63
SHOX2-206ENST00000554685 PRKAR2BP31323 418 aa18.97■□□□□ 0.63
SHOX2-206ENST00000554685 NUTM2BA6NNL0 878 aaPredicted RBP18.96■□□□□ 0.63
SHOX2-206ENST00000554685 NUTM2EB1AL46 878 aaPredicted RBP18.96■□□□□ 0.63
SHOX2-206ENST00000554685 NUTM2AQ8IVF1 878 aaPredicted RBP18.96■□□□□ 0.63
SHOX2-206ENST00000554685 PLEKHF1Q96S99 279 aa18.96■□□□□ 0.63
SHOX2-206ENST00000554685 WDR17Q8IZU2 1322 aa18.96■□□□□ 0.63
SHOX2-206ENST00000554685 COL5A2P05997 1499 aaPredicted RBP18.96■□□□□ 0.63
SHOX2-206ENST00000554685 CAMTA1Q9Y6Y1 1673 aa18.95■□□□□ 0.62
SHOX2-206ENST00000554685 NCAPD2Q15021 1401 aa18.95■□□□□ 0.62
SHOX2-206ENST00000554685 APAF1O14727 1248 aa18.94■□□□□ 0.62
SHOX2-206ENST00000554685 ADAMTS2O95450 1211 aa18.94■□□□□ 0.62
SHOX2-206ENST00000554685 EVA1CP58658 441 aa18.94■□□□□ 0.62
SHOX2-206ENST00000554685 NBPF6Q5VWK0 638 aa18.94■□□□□ 0.62
SHOX2-206ENST00000554685 TCP11L2Q8N4U5 519 aa18.94■□□□□ 0.62
SHOX2-206ENST00000554685 CNKSR2Q8WXI2 1034 aa18.94■□□□□ 0.62
SHOX2-206ENST00000554685 NBPF4Q96M43 638 aa18.94■□□□□ 0.62
SHOX2-206ENST00000554685 NLRP2Q9NX02 1062 aa18.94■□□□□ 0.62
SHOX2-206ENST00000554685 PLEKHG2Q9H7P9 1386 aa18.93■□□□□ 0.62
SHOX2-206ENST00000554685 AEBP1Q8IUX7 1158 aa18.93■□□□□ 0.62
SHOX2-206ENST00000554685 BTG4Q9NY30 223 aa18.93■□□□□ 0.62
SHOX2-206ENST00000554685 RGPD5Q99666 1765 aa18.92■□□□□ 0.62
SHOX2-206ENST00000554685 CENPBP07199 599 aaPredicted RBP18.92■□□□□ 0.62
SHOX2-206ENST00000554685 FBXO41Q8TF61 875 aa18.92■□□□□ 0.62
SHOX2-206ENST00000554685 TOM1L2Q6ZVM7 507 aa18.91■□□□□ 0.62
SHOX2-206ENST00000554685 TMPOP42166 694 aaKnown RBP18.9■□□□□ 0.62
SHOX2-206ENST00000554685 ILDR1Q86SU0 546 aaPredicted RBP18.9■□□□□ 0.62
SHOX2-206ENST00000554685 STRN4Q9NRL3 753 aa18.9■□□□□ 0.62
SHOX2-206ENST00000554685 LMOD3Q0VAK6 560 aa18.89■□□□□ 0.61
SHOX2-206ENST00000554685 NFE2L2Q16236 605 aa18.89■□□□□ 0.61
SHOX2-206ENST00000554685 CCDC27Q2M243 656 aa18.89■□□□□ 0.61
SHOX2-206ENST00000554685 USHBP1Q8N6Y0 703 aa18.89■□□□□ 0.61
SHOX2-206ENST00000554685 GAS2L2Q8NHY3 880 aa18.89■□□□□ 0.61
SHOX2-206ENST00000554685 RAPGEF4Q8WZA2 1011 aa18.89■□□□□ 0.61
SHOX2-206ENST00000554685 CARD10Q9BWT7 1032 aa18.89■□□□□ 0.61
SHOX2-206ENST00000554685 CRB1P82279 1406 aa18.89■□□□□ 0.61
SHOX2-206ENST00000554685 PDE3BQ13370 1112 aa18.88■□□□□ 0.61
SHOX2-206ENST00000554685 MEX3CQ5U5Q3 659 aaKnown RBP18.88■□□□□ 0.61
SHOX2-206ENST00000554685 PLCH1Q4KWH8 1693 aa18.88■□□□□ 0.61
SHOX2-206ENST00000554685 NWD2Q9ULI1 1742 aa18.88■□□□□ 0.61
SHOX2-206ENST00000554685 SLIT2O94813 1529 aa18.87■□□□□ 0.61
SHOX2-206ENST00000554685 AMOTQ4VCS5 1084 aa18.87■□□□□ 0.61
SHOX2-206ENST00000554685 PHACTR3Q96KR7 559 aa18.87■□□□□ 0.61
SHOX2-206ENST00000554685 LRP6O75581 1613 aa18.86■□□□□ 0.61
SHOX2-206ENST00000554685 TATP17735 454 aaPredicted RBP18.86■□□□□ 0.61
SHOX2-206ENST00000554685 PLEKHO1Q53GL0 409 aaPredicted RBP18.86■□□□□ 0.61
SHOX2-206ENST00000554685 NGLY1Q96IV0 654 aa18.86■□□□□ 0.61
SHOX2-206ENST00000554685 C8orf37Q96NL8 207 aa18.86■□□□□ 0.61
SHOX2-206ENST00000554685 SALL2Q9Y467 1007 aaPredicted RBP18.86■□□□□ 0.61
SHOX2-206ENST00000554685 RIPK4P57078 832 aa18.85■□□□□ 0.61
SHOX2-206ENST00000554685 NEUROD2Q15784 382 aa18.85■□□□□ 0.61
SHOX2-206ENST00000554685 LARP1Q6PKG0 1096 aaKnown RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms