RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 NFAT5O94916 1531 aa10.59□□□□□ -0.71
LINC00640-201ENST00000554409 ABCC6O95255 1503 aa10.59□□□□□ -0.71
LINC00640-201ENST00000554409 CCER1Q8TC90 406 aaPredicted RBP10.59□□□□□ -0.71
LINC00640-201ENST00000554409 USP31Q70CQ4 1352 aa10.59□□□□□ -0.71
LINC00640-201ENST00000554409 SPATA31A5Q5VU36 1347 aa10.58□□□□□ -0.71
LINC00640-201ENST00000554409 SPATA31A7Q8IWB4 1347 aa10.58□□□□□ -0.71
LINC00640-201ENST00000554409 MYOM1P52179 1685 aa10.58□□□□□ -0.72
LINC00640-201ENST00000554409 COL5A2P05997 1499 aaPredicted RBP10.58□□□□□ -0.72
LINC00640-201ENST00000554409 A0A1W2PP64 1363 aa10.58□□□□□ -0.72
LINC00640-201ENST00000554409 CHRNA2Q15822 529 aa10.58□□□□□ -0.72
LINC00640-201ENST00000554409 HDGFL2Q7Z4V5 671 aaPredicted RBP10.58□□□□□ -0.72
LINC00640-201ENST00000554409 CCDC9Q9Y3X0 531 aaKnown RBP10.58□□□□□ -0.72
LINC00640-201ENST00000554409 AATKQ6ZMQ8 1374 aa10.57□□□□□ -0.72
LINC00640-201ENST00000554409 TMF1P82094 1093 aa10.57□□□□□ -0.72
LINC00640-201ENST00000554409 POTEHQ6S545 545 aa10.57□□□□□ -0.72
LINC00640-201ENST00000554409 SEPT12Q8IYM1 358 aa10.57□□□□□ -0.72
LINC00640-201ENST00000554409 KCNH5Q8NCM2 988 aa10.57□□□□□ -0.72
LINC00640-201ENST00000554409 SLC12A5Q9H2X9 1139 aa10.57□□□□□ -0.72
LINC00640-201ENST00000554409 TERF2IPQ9NYB0 399 aa10.57□□□□□ -0.72
LINC00640-201ENST00000554409 SPATA31A1Q5TZJ5 1347 aa10.57□□□□□ -0.72
LINC00640-201ENST00000554409 WNK3Q9BYP7 1800 aa10.56□□□□□ -0.72
LINC00640-201ENST00000554409 TMC1Q8TDI8 760 aa10.56□□□□□ -0.72
LINC00640-201ENST00000554409 LTN1O94822 1766 aa10.56□□□□□ -0.72
LINC00640-201ENST00000554409 RGPD5Q99666 1765 aa10.56□□□□□ -0.72
LINC00640-201ENST00000554409 OVOS2A0A0J9YW53 1432 aa10.56□□□□□ -0.72
LINC00640-201ENST00000554409 OVOS2Q6IE36 1432 aa10.56□□□□□ -0.72
LINC00640-201ENST00000554409 ANKRD36BQ8N2N9 1353 aa10.55□□□□□ -0.72
LINC00640-201ENST00000554409 PARP4Q9UKK3 1724 aaKnown RBP10.55□□□□□ -0.72
LINC00640-201ENST00000554409 CRB1P82279 1406 aa10.54□□□□□ -0.72
LINC00640-201ENST00000554409 FAM98CQ17RN3 349 aaKnown RBP10.54□□□□□ -0.72
LINC00640-201ENST00000554409 CDCA8Q53HL2 280 aa10.54□□□□□ -0.72
LINC00640-201ENST00000554409 BARGINQ6ZT62 677 aa10.54□□□□□ -0.72
LINC00640-201ENST00000554409 KRT27Q7Z3Y8 459 aa10.54□□□□□ -0.72
LINC00640-201ENST00000554409 ARHGEF25Q86VW2 580 aa10.54□□□□□ -0.72
LINC00640-201ENST00000554409 CCDC125Q86Z20 511 aa10.54□□□□□ -0.72
LINC00640-201ENST00000554409 STRN4Q9NRL3 753 aa10.54□□□□□ -0.72
LINC00640-201ENST00000554409 KIF20BQ96Q89 1820 aa10.54□□□□□ -0.72
LINC00640-201ENST00000554409 BLMP54132 1417 aaPredicted RBP10.53□□□□□ -0.72
LINC00640-201ENST00000554409 EVA1CP58658 441 aa10.53□□□□□ -0.72
LINC00640-201ENST00000554409 NME9Q86XW9 330 aa10.53□□□□□ -0.72
LINC00640-201ENST00000554409 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.53□□□□□ -0.72
LINC00640-201ENST00000554409 RGPD1P0DJD0 1748 aa10.53□□□□□ -0.72
LINC00640-201ENST00000554409 LARP1Q6PKG0 1096 aaKnown RBP10.52□□□□□ -0.73
LINC00640-201ENST00000554409 THRAP3Q9Y2W1 955 aaKnown RBP10.52□□□□□ -0.73
LINC00640-201ENST00000554409 TCP11L2Q8N4U5 519 aa10.51□□□□□ -0.73
LINC00640-201ENST00000554409 ZRANB1Q9UGI0 708 aa10.51□□□□□ -0.73
LINC00640-201ENST00000554409 WDR17Q8IZU2 1322 aa10.51□□□□□ -0.73
LINC00640-201ENST00000554409 LRRC37A3O60309 1634 aa10.51□□□□□ -0.73
LINC00640-201ENST00000554409 FAM208AQ9UK61 1670 aaKnown RBP10.5□□□□□ -0.73
LINC00640-201ENST00000554409 TNS1Q9HBL0 1735 aaKnown RBP10.5□□□□□ -0.73
LINC00640-201ENST00000554409 A0A0G2JS52 829 aa10.5□□□□□ -0.73
LINC00640-201ENST00000554409 SPDYE4A6NLX3 237 aa10.5□□□□□ -0.73
LINC00640-201ENST00000554409 EIF4G2P78344 907 aaKnown RBP eCLIP10.5□□□□□ -0.73
LINC00640-201ENST00000554409 MYT1Q01538 1121 aa10.5□□□□□ -0.73
LINC00640-201ENST00000554409 SSUH2Q9Y2M2 353 aa10.5□□□□□ -0.73
LINC00640-201ENST00000554409 AXIN2Q9Y2T1 843 aa10.5□□□□□ -0.73
LINC00640-201ENST00000554409 ZBTB7CA1YPR0 619 aa10.49□□□□□ -0.73
LINC00640-201ENST00000554409 REM2Q8IYK8 340 aaPredicted RBP10.49□□□□□ -0.73
LINC00640-201ENST00000554409 PEAK1Q9H792 1746 aa10.48□□□□□ -0.73
LINC00640-201ENST00000554409 SOX12O15370 315 aa10.48□□□□□ -0.73
LINC00640-201ENST00000554409 USP35Q9P2H5 1018 aa10.48□□□□□ -0.73
LINC00640-201ENST00000554409 ANKRD26Q9UPS8 1709 aa10.47□□□□□ -0.73
LINC00640-201ENST00000554409 EP400Q96L91 3159 aa10.47□□□□□ -0.73
LINC00640-201ENST00000554409 HSPA5P11021 654 aaKnown RBP10.47□□□□□ -0.73
LINC00640-201ENST00000554409 TOM1L2Q6ZVM7 507 aa10.47□□□□□ -0.73
LINC00640-201ENST00000554409 COG3Q96JB2 828 aa10.47□□□□□ -0.73
LINC00640-201ENST00000554409 CCDC7Q96M83 1385 aa10.47□□□□□ -0.73
LINC00640-201ENST00000554409 DISP2A7MBM2 1401 aa10.47□□□□□ -0.73
LINC00640-201ENST00000554409 FYB1O15117 783 aa10.46□□□□□ -0.73
LINC00640-201ENST00000554409 CDCA7Q9BWT1 371 aaPredicted RBP10.46□□□□□ -0.73
LINC00640-201ENST00000554409 CARD10Q9BWT7 1032 aa10.46□□□□□ -0.73
LINC00640-201ENST00000554409 ERBB3P21860 1342 aa10.46□□□□□ -0.73
LINC00640-201ENST00000554409 RTL1A6NKG5 1358 aa10.46□□□□□ -0.74
LINC00640-201ENST00000554409 NSD3Q9BZ95 1437 aa10.46□□□□□ -0.74
LINC00640-201ENST00000554409 SBF2Q86WG5 1849 aa10.45□□□□□ -0.74
LINC00640-201ENST00000554409 SF3B2Q13435 895 aaKnown RBP10.45□□□□□ -0.74
LINC00640-201ENST00000554409 FAM196AQ6ZSG2 479 aa10.45□□□□□ -0.74
LINC00640-201ENST00000554409 C11orf95C9JLR9 678 aaPredicted RBP10.44□□□□□ -0.74
LINC00640-201ENST00000554409 CSB-PGBD3P0DP91 1061 aa10.44□□□□□ -0.74
LINC00640-201ENST00000554409 PDE3BQ13370 1112 aa10.44□□□□□ -0.74
LINC00640-201ENST00000554409 FAM182BQ5T319 152 aa10.44□□□□□ -0.74
LINC00640-201ENST00000554409 IP6K1Q92551 441 aa10.44□□□□□ -0.74
LINC00640-201ENST00000554409 CARD14Q9BXL6 1004 aa10.44□□□□□ -0.74
LINC00640-201ENST00000554409 OVOS2A0A0G2JMS6 1433 aa10.43□□□□□ -0.74
LINC00640-201ENST00000554409 BCL9O00512 1426 aa10.43□□□□□ -0.74
LINC00640-201ENST00000554409 KIF24Q5T7B8 1368 aa10.43□□□□□ -0.74
LINC00640-201ENST00000554409 MAP3K19Q56UN5 1328 aa10.43□□□□□ -0.74
LINC00640-201ENST00000554409 ANKRD24Q8TF21 1146 aa10.43□□□□□ -0.74
LINC00640-201ENST00000554409 GGNBP2Q9H3C7 697 aa10.43□□□□□ -0.74
LINC00640-201ENST00000554409 RGPD3A6NKT7 1758 aaPredicted RBP10.43□□□□□ -0.74
LINC00640-201ENST00000554409 RGPD2P0DJD1 1756 aa10.43□□□□□ -0.74
LINC00640-201ENST00000554409 RGPD4Q7Z3J3 1758 aa10.43□□□□□ -0.74
LINC00640-201ENST00000554409 TNS2Q63HR2 1409 aa10.42□□□□□ -0.74
LINC00640-201ENST00000554409 RREB1Q92766 1687 aa10.42□□□□□ -0.74
LINC00640-201ENST00000554409 HOXC9P31274 260 aa10.42□□□□□ -0.74
LINC00640-201ENST00000554409 BAG6P46379 1132 aa10.42□□□□□ -0.74
LINC00640-201ENST00000554409 DDB1Q16531 1140 aa10.42□□□□□ -0.74
LINC00640-201ENST00000554409 CGNL1Q0VF96 1302 aa10.41□□□□□ -0.74
LINC00640-201ENST00000554409 DEFB132Q7Z7B7 95 aa10.41□□□□□ -0.74
LINC00640-201ENST00000554409 MAP2P11137 1827 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms