RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 ST20-MTHFSA0A0A6YYL1 179 aa14.67□□□□□ -0.06
PTCD2P1-201ENST00000554393 FAM98CQ17RN3 349 aaKnown RBP14.67□□□□□ -0.06
PTCD2P1-201ENST00000554393 PCGF6Q9BYE7 350 aa14.67□□□□□ -0.06
PTCD2P1-201ENST00000554393 AATKQ6ZMQ8 1374 aa14.67□□□□□ -0.06
PTCD2P1-201ENST00000554393 USP47Q96K76 1375 aa14.67□□□□□ -0.06
PTCD2P1-201ENST00000554393 COL5A2P05997 1499 aaPredicted RBP14.67□□□□□ -0.06
PTCD2P1-201ENST00000554393 BLMP54132 1417 aaPredicted RBP14.66□□□□□ -0.06
PTCD2P1-201ENST00000554393 EDC4Q6P2E9 1401 aaKnown RBP14.66□□□□□ -0.06
PTCD2P1-201ENST00000554393 NFAT5O94916 1531 aa14.66□□□□□ -0.06
PTCD2P1-201ENST00000554393 YY1P25490 414 aa14.66□□□□□ -0.06
PTCD2P1-201ENST00000554393 POLA2Q14181 598 aa14.66□□□□□ -0.06
PTCD2P1-201ENST00000554393 KRT27Q7Z3Y8 459 aa14.66□□□□□ -0.06
PTCD2P1-201ENST00000554393 KCNH5Q8NCM2 988 aa14.66□□□□□ -0.06
PTCD2P1-201ENST00000554393 USP31Q70CQ4 1352 aa14.65□□□□□ -0.06
PTCD2P1-201ENST00000554393 HDGFL2Q7Z4V5 671 aaPredicted RBP14.65□□□□□ -0.06
PTCD2P1-201ENST00000554393 RGPD1P0DJD0 1748 aa14.65□□□□□ -0.06
PTCD2P1-201ENST00000554393 RGPD5Q99666 1765 aa14.65□□□□□ -0.06
PTCD2P1-201ENST00000554393 PARP4Q9UKK3 1724 aaKnown RBP14.64□□□□□ -0.07
PTCD2P1-201ENST00000554393 ABCB7O75027 752 aa14.64□□□□□ -0.07
PTCD2P1-201ENST00000554393 EVA1CP58658 441 aa14.64□□□□□ -0.07
PTCD2P1-201ENST00000554393 TMC1Q8TDI8 760 aa14.64□□□□□ -0.07
PTCD2P1-201ENST00000554393 STRN4Q9NRL3 753 aa14.64□□□□□ -0.07
PTCD2P1-201ENST00000554393 TERF2IPQ9NYB0 399 aa14.64□□□□□ -0.07
PTCD2P1-201ENST00000554393 WNK3Q9BYP7 1800 aa14.64□□□□□ -0.07
PTCD2P1-201ENST00000554393 A0A1W2PP64 1363 aa14.63□□□□□ -0.07
PTCD2P1-201ENST00000554393 LTN1O94822 1766 aa14.63□□□□□ -0.07
PTCD2P1-201ENST00000554393 A0A0G2JS52 829 aa14.63□□□□□ -0.07
PTCD2P1-201ENST00000554393 MYT1Q01538 1121 aa14.63□□□□□ -0.07
PTCD2P1-201ENST00000554393 BARGINQ6ZT62 677 aa14.63□□□□□ -0.07
PTCD2P1-201ENST00000554393 SLC12A5Q9H2X9 1139 aa14.63□□□□□ -0.07
PTCD2P1-201ENST00000554393 CRB1P82279 1406 aa14.63□□□□□ -0.07
PTCD2P1-201ENST00000554393 THRAP3Q9Y2W1 955 aaKnown RBP14.62□□□□□ -0.07
PTCD2P1-201ENST00000554393 TMF1P82094 1093 aa14.61□□□□□ -0.07
PTCD2P1-201ENST00000554393 LARP1Q6PKG0 1096 aaKnown RBP14.61□□□□□ -0.07
PTCD2P1-201ENST00000554393 ARHGEF25Q86VW2 580 aa14.61□□□□□ -0.07
PTCD2P1-201ENST00000554393 OVOS2A0A0J9YW53 1432 aa14.6□□□□□ -0.07
PTCD2P1-201ENST00000554393 OVOS2Q6IE36 1432 aa14.6□□□□□ -0.07
PTCD2P1-201ENST00000554393 TCP11L2Q8N4U5 519 aa14.6□□□□□ -0.07
PTCD2P1-201ENST00000554393 TNS1Q9HBL0 1735 aaKnown RBP14.6□□□□□ -0.07
PTCD2P1-201ENST00000554393 ANKRD36BQ8N2N9 1353 aa14.6□□□□□ -0.07
PTCD2P1-201ENST00000554393 MYOM1P52179 1685 aa14.59□□□□□ -0.07
PTCD2P1-201ENST00000554393 CDCA8Q53HL2 280 aa14.59□□□□□ -0.07
PTCD2P1-201ENST00000554393 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.59□□□□□ -0.07
PTCD2P1-201ENST00000554393 SF3B2Q13435 895 aaKnown RBP14.58□□□□□ -0.08
PTCD2P1-201ENST00000554393 NME9Q86XW9 330 aa14.58□□□□□ -0.08
PTCD2P1-201ENST00000554393 CCER1Q8TC90 406 aaPredicted RBP14.58□□□□□ -0.08
PTCD2P1-201ENST00000554393 WDR17Q8IZU2 1322 aa14.58□□□□□ -0.08
PTCD2P1-201ENST00000554393 LRRC37A3O60309 1634 aa14.58□□□□□ -0.08
PTCD2P1-201ENST00000554393 ZBTB7CA1YPR0 619 aa14.57□□□□□ -0.08
PTCD2P1-201ENST00000554393 USP35Q9P2H5 1018 aa14.57□□□□□ -0.08
PTCD2P1-201ENST00000554393 FAM208AQ9UK61 1670 aaKnown RBP14.56□□□□□ -0.08
PTCD2P1-201ENST00000554393 AXIN2Q9Y2T1 843 aa14.56□□□□□ -0.08
PTCD2P1-201ENST00000554393 KIF20BQ96Q89 1820 aa14.56□□□□□ -0.08
PTCD2P1-201ENST00000554393 DISP2A7MBM2 1401 aa14.56□□□□□ -0.08
PTCD2P1-201ENST00000554393 PEAK1Q9H792 1746 aa14.55□□□□□ -0.08
PTCD2P1-201ENST00000554393 SOX12O15370 315 aa14.54□□□□□ -0.08
PTCD2P1-201ENST00000554393 PDE3BQ13370 1112 aa14.54□□□□□ -0.08
PTCD2P1-201ENST00000554393 FAM196AQ6ZSG2 479 aa14.54□□□□□ -0.08
PTCD2P1-201ENST00000554393 TOM1L2Q6ZVM7 507 aa14.54□□□□□ -0.08
PTCD2P1-201ENST00000554393 C11orf95C9JLR9 678 aaPredicted RBP14.53□□□□□ -0.08
PTCD2P1-201ENST00000554393 BAG6P46379 1132 aa14.53□□□□□ -0.08
PTCD2P1-201ENST00000554393 CDCA7Q9BWT1 371 aaPredicted RBP14.53□□□□□ -0.08
PTCD2P1-201ENST00000554393 CARD10Q9BWT7 1032 aa14.53□□□□□ -0.08
PTCD2P1-201ENST00000554393 SBF2Q86WG5 1849 aa14.52□□□□□ -0.08
PTCD2P1-201ENST00000554393 CCDC7Q96M83 1385 aa14.52□□□□□ -0.08
PTCD2P1-201ENST00000554393 DEFB132Q7Z7B7 95 aa14.52□□□□□ -0.09
PTCD2P1-201ENST00000554393 ERBB3P21860 1342 aa14.51□□□□□ -0.09
PTCD2P1-201ENST00000554393 PSDA5PKW4 1024 aaPredicted RBP14.51□□□□□ -0.09
PTCD2P1-201ENST00000554393 FAM182BQ5T319 152 aa14.51□□□□□ -0.09
PTCD2P1-201ENST00000554393 OVOS2A0A0G2JMS6 1433 aa14.5□□□□□ -0.09
PTCD2P1-201ENST00000554393 RGPD3A6NKT7 1758 aaPredicted RBP14.5□□□□□ -0.09
PTCD2P1-201ENST00000554393 RGPD4Q7Z3J3 1758 aa14.5□□□□□ -0.09
PTCD2P1-201ENST00000554393 SENP3-EIF4A1A0A087X0R7 540 aa14.5□□□□□ -0.09
PTCD2P1-201ENST00000554393 CSB-PGBD3P0DP91 1061 aa14.5□□□□□ -0.09
PTCD2P1-201ENST00000554393 COG3Q96JB2 828 aa14.5□□□□□ -0.09
PTCD2P1-201ENST00000554393 BCL9O00512 1426 aa14.49□□□□□ -0.09
PTCD2P1-201ENST00000554393 RREB1Q92766 1687 aa14.49□□□□□ -0.09
PTCD2P1-201ENST00000554393 PARD3Q8TEW0 1356 aa14.48□□□□□ -0.09
PTCD2P1-201ENST00000554393 EIF4G2P78344 907 aaKnown RBP eCLIP14.48□□□□□ -0.09
PTCD2P1-201ENST00000554393 DDB1Q16531 1140 aa14.48□□□□□ -0.09
PTCD2P1-201ENST00000554393 ZBTB12Q9Y330 459 aaPredicted RBP14.48□□□□□ -0.09
PTCD2P1-201ENST00000554393 RTL1A6NKG5 1358 aa14.47□□□□□ -0.09
PTCD2P1-201ENST00000554393 FYB1O15117 783 aa14.47□□□□□ -0.09
PTCD2P1-201ENST00000554393 IP6K1Q92551 441 aa14.47□□□□□ -0.09
PTCD2P1-201ENST00000554393 TNS2Q63HR2 1409 aa14.47□□□□□ -0.09
PTCD2P1-201ENST00000554393 TRIM37O94972 964 aa14.46□□□□□ -0.09
PTCD2P1-201ENST00000554393 ANKRD24Q8TF21 1146 aa14.46□□□□□ -0.09
PTCD2P1-201ENST00000554393 ANKRD26Q9UPS8 1709 aa14.46□□□□□ -0.1
PTCD2P1-201ENST00000554393 MAP3K19Q56UN5 1328 aa14.45□□□□□ -0.1
PTCD2P1-201ENST00000554393 NSD3Q9BZ95 1437 aa14.45□□□□□ -0.1
PTCD2P1-201ENST00000554393 KIF24Q5T7B8 1368 aa14.45□□□□□ -0.1
PTCD2P1-201ENST00000554393 NUP188Q5SRE5 1749 aa14.44□□□□□ -0.1
PTCD2P1-201ENST00000554393 EN1Q05925 392 aaPredicted RBP14.44□□□□□ -0.1
PTCD2P1-201ENST00000554393 NLRP2Q9NX02 1062 aa14.44□□□□□ -0.1
PTCD2P1-201ENST00000554393 RGPD2P0DJD1 1756 aa14.44□□□□□ -0.1
PTCD2P1-201ENST00000554393 APBA3O96018 575 aa14.43□□□□□ -0.1
PTCD2P1-201ENST00000554393 HSPA5P11021 654 aaKnown RBP14.43□□□□□ -0.1
PTCD2P1-201ENST00000554393 CAMKK2Q96RR4 588 aa14.43□□□□□ -0.1
PTCD2P1-201ENST00000554393 CARD14Q9BXL6 1004 aa14.43□□□□□ -0.1
PTCD2P1-201ENST00000554393 GGNBP2Q9H3C7 697 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms