RNA–Protein interactions for RNA: ENST00000554026.5

IFT43-206, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,102 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-206ENST00000554026 VPS72Q15906 364 aa15.38■□□□□ 0.05
IFT43-206ENST00000554026 SRCAPQ6ZRS2 3230 aa15.38■□□□□ 0.05
IFT43-206ENST00000554026 ZBTB7CA1YPR0 619 aa15.37■□□□□ 0.05
IFT43-206ENST00000554026 LMO7Q8WWI1 1683 aa15.37■□□□□ 0.05
IFT43-206ENST00000554026 RTL1A6NKG5 1358 aa15.36■□□□□ 0.05
IFT43-206ENST00000554026 AMER1Q5JTC6 1135 aaPredicted RBP15.36■□□□□ 0.05
IFT43-206ENST00000554026 MORC1Q86VD1 984 aa15.36■□□□□ 0.05
IFT43-206ENST00000554026 BLMP54132 1417 aaPredicted RBP15.35■□□□□ 0.05
IFT43-206ENST00000554026 LTN1O94822 1766 aa15.35■□□□□ 0.05
IFT43-206ENST00000554026 ZNF316A6NFI3 1004 aaPredicted RBP15.35■□□□□ 0.05
IFT43-206ENST00000554026 AMPHP49418 695 aa15.35■□□□□ 0.05
IFT43-206ENST00000554026 GJD4Q96KN9 370 aaPredicted RBP15.35■□□□□ 0.05
IFT43-206ENST00000554026 CAMTA1Q9Y6Y1 1673 aa15.35■□□□□ 0.05
IFT43-206ENST00000554026 NRAPQ86VF7 1730 aa15.34■□□□□ 0.05
IFT43-206ENST00000554026 IP6K1Q92551 441 aa15.34■□□□□ 0.05
IFT43-206ENST00000554026 CCDC9Q9Y3X0 531 aaKnown RBP15.34■□□□□ 0.05
IFT43-206ENST00000554026 COL18A1P39060 1754 aa15.34■□□□□ 0.05
IFT43-206ENST00000554026 STRN4Q9NRL3 753 aa15.33■□□□□ 0.04
IFT43-206ENST00000554026 MAP3K19Q56UN5 1328 aa15.33■□□□□ 0.04
IFT43-206ENST00000554026 COL5A2P05997 1499 aaPredicted RBP15.33■□□□□ 0.04
IFT43-206ENST00000554026 THRAP3Q9Y2W1 955 aaKnown RBP15.32■□□□□ 0.04
IFT43-206ENST00000554026 FLT4P35916 1363 aa15.32■□□□□ 0.04
IFT43-206ENST00000554026 GLI3P10071 1580 aa15.32■□□□□ 0.04
IFT43-206ENST00000554026 HOXC9P31274 260 aa15.31■□□□□ 0.04
IFT43-206ENST00000554026 SPATA31A5Q5VU36 1347 aa15.31■□□□□ 0.04
IFT43-206ENST00000554026 SPATA31A7Q8IWB4 1347 aa15.31■□□□□ 0.04
IFT43-206ENST00000554026 WDR17Q8IZU2 1322 aa15.31■□□□□ 0.04
IFT43-206ENST00000554026 CRB1P82279 1406 aa15.31■□□□□ 0.04
IFT43-206ENST00000554026 BRWD3Q6RI45 1802 aa15.31■□□□□ 0.04
IFT43-206ENST00000554026 CSB-PGBD3P0DP91 1061 aa15.3■□□□□ 0.04
IFT43-206ENST00000554026 RRS1Q15050 365 aaKnown RBP15.3■□□□□ 0.04
IFT43-206ENST00000554026 SPATA31A1Q5TZJ5 1347 aa15.3■□□□□ 0.04
IFT43-206ENST00000554026 SMG6Q86US8 1419 aaKnown RBP15.3■□□□□ 0.04
IFT43-206ENST00000554026 AXIN2Q9Y2T1 843 aa15.3■□□□□ 0.04
IFT43-206ENST00000554026 INSRP06213 1382 aa15.29■□□□□ 0.04
IFT43-206ENST00000554026 ERBB3P21860 1342 aa15.29■□□□□ 0.04
IFT43-206ENST00000554026 DDX10Q13206 875 aaKnown RBP15.29■□□□□ 0.04
IFT43-206ENST00000554026 CC2D1BQ5T0F9 858 aaKnown RBP15.29■□□□□ 0.04
IFT43-206ENST00000554026 TOM1L2Q6ZVM7 507 aa15.29■□□□□ 0.04
IFT43-206ENST00000554026 MAP2P11137 1827 aaKnown RBP15.29■□□□□ 0.04
IFT43-206ENST00000554026 FAM208AQ9UK61 1670 aaKnown RBP15.28■□□□□ 0.04
IFT43-206ENST00000554026 ONECUT3O60422 494 aaPredicted RBP15.28■□□□□ 0.04
IFT43-206ENST00000554026 TNNT2P45379 298 aaPredicted RBP15.28■□□□□ 0.04
IFT43-206ENST00000554026 LARP1Q6PKG0 1096 aaKnown RBP15.28■□□□□ 0.04
IFT43-206ENST00000554026 BARGINQ6ZT62 677 aa15.28■□□□□ 0.04
IFT43-206ENST00000554026 TCP11L2Q8N4U5 519 aa15.28■□□□□ 0.04
IFT43-206ENST00000554026 ANKRD24Q8TF21 1146 aa15.28■□□□□ 0.04
IFT43-206ENST00000554026 CDCA7Q9BWT1 371 aaPredicted RBP15.28■□□□□ 0.04
IFT43-206ENST00000554026 CARD10Q9BWT7 1032 aa15.28■□□□□ 0.04
IFT43-206ENST00000554026 POLKQ9UBT6 870 aa15.28■□□□□ 0.04
IFT43-206ENST00000554026 RGPD5Q99666 1765 aa15.27■□□□□ 0.04
IFT43-206ENST00000554026 PPM1GO15355 546 aaPredicted RBP15.27■□□□□ 0.04
IFT43-206ENST00000554026 FBLN1P23142 703 aa15.26■□□□□ 0.03
IFT43-206ENST00000554026 EMILIN1Q9Y6C2 1016 aa15.26■□□□□ 0.03
IFT43-206ENST00000554026 NLRP2Q9NX02 1062 aa15.25■□□□□ 0.03
IFT43-206ENST00000554026 A0A0G2JS52 829 aa15.23■□□□□ 0.03
IFT43-206ENST00000554026 MYT1Q01538 1121 aa15.23■□□□□ 0.03
IFT43-206ENST00000554026 RALBP1Q15311 655 aa15.23■□□□□ 0.03
IFT43-206ENST00000554026 FAM98CQ17RN3 349 aaKnown RBP15.23■□□□□ 0.03
IFT43-206ENST00000554026 HSP90AB2PQ58FF8 381 aa15.23■□□□□ 0.03
IFT43-206ENST00000554026 USP35Q9P2H5 1018 aa15.23■□□□□ 0.03
IFT43-206ENST00000554026 PEAK1Q9H792 1746 aa15.23■□□□□ 0.03
IFT43-206ENST00000554026 SEPT12Q8IYM1 358 aa15.22■□□□□ 0.03
IFT43-206ENST00000554026 LTV1Q96GA3 475 aaPredicted RBP15.22■□□□□ 0.03
IFT43-206ENST00000554026 MTHFSP49914 203 aa15.21■□□□□ 0.03
IFT43-206ENST00000554026 CCDC125Q86Z20 511 aa15.21■□□□□ 0.03
IFT43-206ENST00000554026 CFAP53Q96M91 514 aa15.21■□□□□ 0.03
IFT43-206ENST00000554026 PARD3Q8TEW0 1356 aa15.2■□□□□ 0.02
IFT43-206ENST00000554026 THSD7AQ9UPZ6 1657 aa15.19■□□□□ 0.02
IFT43-206ENST00000554026 IL2RBP14784 551 aa15.19■□□□□ 0.02
IFT43-206ENST00000554026 CNGB1Q14028 1251 aaPredicted RBP15.19■□□□□ 0.02
IFT43-206ENST00000554026 PPP2R1AP30153 589 aa15.18■□□□□ 0.02
IFT43-206ENST00000554026 LRP5O75197 1615 aa15.17■□□□□ 0.02
IFT43-206ENST00000554026 PARP4Q9UKK3 1724 aaKnown RBP15.17■□□□□ 0.02
IFT43-206ENST00000554026 PLEKHG2Q9H7P9 1386 aa15.17■□□□□ 0.02
IFT43-206ENST00000554026 PDE3BQ13370 1112 aa15.17■□□□□ 0.02
IFT43-206ENST00000554026 EIF4A2Q14240 407 aaKnown RBP15.17■□□□□ 0.02
IFT43-206ENST00000554026 DDB1Q16531 1140 aa15.17■□□□□ 0.02
IFT43-206ENST00000554026 NBPF6Q5VWK0 638 aa15.17■□□□□ 0.02
IFT43-206ENST00000554026 KRT27Q7Z3Y8 459 aa15.17■□□□□ 0.02
IFT43-206ENST00000554026 RAPGEF4Q8WZA2 1011 aa15.17■□□□□ 0.02
IFT43-206ENST00000554026 NBPF4Q96M43 638 aa15.17■□□□□ 0.02
IFT43-206ENST00000554026 WNK3Q9BYP7 1800 aa15.16■□□□□ 0.02
IFT43-206ENST00000554026 EXOC5O00471 708 aa15.16■□□□□ 0.02
IFT43-206ENST00000554026 DIAPH1O60610 1272 aaKnown RBP15.16■□□□□ 0.02
IFT43-206ENST00000554026 RGPD1P0DJD0 1748 aa15.16■□□□□ 0.02
IFT43-206ENST00000554026 DISP2A7MBM2 1401 aa15.16■□□□□ 0.02
IFT43-206ENST00000554026 TATP17735 454 aaPredicted RBP15.14■□□□□ 0.01
IFT43-206ENST00000554026 EYA1Q99502 592 aa15.14■□□□□ 0.01
IFT43-206ENST00000554026 NUDCQ9Y266 331 aa15.14■□□□□ 0.01
IFT43-206ENST00000554026 NCAPD2Q15021 1401 aa15.14■□□□□ 0.01
IFT43-206ENST00000554026 IGSF1Q8N6C5 1336 aa15.14■□□□□ 0.01
IFT43-206ENST00000554026 MYBBP1AQ9BQG0 1328 aaKnown RBP15.14■□□□□ 0.01
IFT43-206ENST00000554026 IL13P35225 146 aa15.13■□□□□ 0.01
IFT43-206ENST00000554026 TNS2Q63HR2 1409 aa15.12■□□□□ 0.01
IFT43-206ENST00000554026 RGPD2P0DJD1 1756 aa15.12■□□□□ 0.01
IFT43-206ENST00000554026 PRKRIP1Q9H875 184 aaPredicted RBP15.12■□□□□ 0.01
IFT43-206ENST00000554026 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.12■□□□□ 0.01
IFT43-206ENST00000554026 TNS1Q9HBL0 1735 aaKnown RBP15.12■□□□□ 0.01
IFT43-206ENST00000554026 LRRC37A3O60309 1634 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms