RNA–Protein interactions for RNA: ENST00000553927.1

RPGRIP1-204, Transcript of RPGR interacting protein 1, humanhuman

TSL 2

Gene RPGRIP1, Length 2,875 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1-204ENST00000553927 SCAPERQ9BY12 1400 aa8.3□□□□□ -1.08
RPGRIP1-204ENST00000553927 GRIN2AQ12879 1464 aa8.3□□□□□ -1.08
RPGRIP1-204ENST00000553927 HCLS1P14317 486 aaPredicted RBP8.29□□□□□ -1.08
RPGRIP1-204ENST00000553927 PPIP5K1Q6PFW1 1433 aa8.29□□□□□ -1.08
RPGRIP1-204ENST00000553927 SCAF11Q99590 1463 aaKnown RBP8.29□□□□□ -1.08
RPGRIP1-204ENST00000553927 ERICH4A6NGS2 130 aa8.29□□□□□ -1.08
RPGRIP1-204ENST00000553927 PDIA4P13667 645 aaKnown RBP8.29□□□□□ -1.08
RPGRIP1-204ENST00000553927 SIRT2Q8IXJ6 389 aa8.29□□□□□ -1.08
RPGRIP1-204ENST00000553927 THUMPD2Q9BTF0 503 aaKnown RBP8.29□□□□□ -1.08
RPGRIP1-204ENST00000553927 PYCARDQ9ULZ3 195 aa8.29□□□□□ -1.08
RPGRIP1-204ENST00000553927 EIF2AK4Q9P2K8 1649 aaKnown RBP8.29□□□□□ -1.08
RPGRIP1-204ENST00000553927 IQSEC2Q5JU85 1478 aa8.29□□□□□ -1.08
RPGRIP1-204ENST00000553927 PRIMPOLQ96LW4 560 aa8.28□□□□□ -1.08
RPGRIP1-204ENST00000553927 CFAP53Q96M91 514 aa8.28□□□□□ -1.08
RPGRIP1-204ENST00000553927 KCNJ4P48050 445 aa8.28□□□□□ -1.08
RPGRIP1-204ENST00000553927 TRAK1Q9UPV9 953 aa8.28□□□□□ -1.08
RPGRIP1-204ENST00000553927 LAMC1P11047 1609 aa8.28□□□□□ -1.08
RPGRIP1-204ENST00000553927 NPC1L1Q9UHC9 1359 aa8.28□□□□□ -1.08
RPGRIP1-204ENST00000553927 SHANK2Q9UPX8 1470 aa8.28□□□□□ -1.08
RPGRIP1-204ENST00000553927 HOXD11P31277 338 aaPredicted RBP8.28□□□□□ -1.08
RPGRIP1-204ENST00000553927 HMGN5P82970 282 aaKnown RBP8.28□□□□□ -1.08
RPGRIP1-204ENST00000553927 TRIM35Q9UPQ4 493 aa8.28□□□□□ -1.08
RPGRIP1-204ENST00000553927 ST18O60284 1047 aa8.27□□□□□ -1.09
RPGRIP1-204ENST00000553927 USP26Q9BXU7 913 aa8.27□□□□□ -1.09
RPGRIP1-204ENST00000553927 NUP160Q12769 1436 aa8.27□□□□□ -1.09
RPGRIP1-204ENST00000553927 CFAP74Q9C0B2 1584 aa8.27□□□□□ -1.09
RPGRIP1-204ENST00000553927 TMPOP42166 694 aaKnown RBP8.27□□□□□ -1.09
RPGRIP1-204ENST00000553927 NEK4P51957 841 aa8.27□□□□□ -1.09
RPGRIP1-204ENST00000553927 SAFB2Q14151 953 aaKnown RBP eCLIP8.27□□□□□ -1.09
RPGRIP1-204ENST00000553927 TSHZ3Q63HK5 1081 aa8.27□□□□□ -1.09
RPGRIP1-204ENST00000553927 CERS3Q8IU89 383 aa8.27□□□□□ -1.09
RPGRIP1-204ENST00000553927 ADAMTS12P58397 1594 aa8.26□□□□□ -1.09
RPGRIP1-204ENST00000553927 FKBP5Q13451 457 aaPredicted RBP8.26□□□□□ -1.09
RPGRIP1-204ENST00000553927 PLEKHM2Q8IWE5 1019 aa8.26□□□□□ -1.09
RPGRIP1-204ENST00000553927 ERVK-7P63135 1459 aa8.26□□□□□ -1.09
RPGRIP1-204ENST00000553927 SHPRHQ149N8 1683 aa8.26□□□□□ -1.09
RPGRIP1-204ENST00000553927 IPO8O15397 1037 aaKnown RBP8.26□□□□□ -1.09
RPGRIP1-204ENST00000553927 CHGAP10645 457 aaKnown RBP8.26□□□□□ -1.09
RPGRIP1-204ENST00000553927 LARP6Q9BRS8 491 aaKnown RBP8.26□□□□□ -1.09
RPGRIP1-204ENST00000553927 ADGRF5Q8IZF2 1346 aa8.26□□□□□ -1.09
RPGRIP1-204ENST00000553927 SYNJ2O15056 1496 aa8.26□□□□□ -1.09
RPGRIP1-204ENST00000553927 PBRM1Q86U86 1689 aa8.26□□□□□ -1.09
RPGRIP1-204ENST00000553927 RNF17Q9BXT8 1623 aaKnown RBP8.25□□□□□ -1.09
RPGRIP1-204ENST00000553927 ZBTB7BO15156 539 aaPredicted RBP8.25□□□□□ -1.09
RPGRIP1-204ENST00000553927 CHAF1AQ13111 956 aaPredicted RBP8.25□□□□□ -1.09
RPGRIP1-204ENST00000553927 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.25□□□□□ -1.09
RPGRIP1-204ENST00000553927 V9GYY5 206 aaPredicted RBP8.25□□□□□ -1.09
RPGRIP1-204ENST00000553927 SHROOM2Q13796 1616 aa8.25□□□□□ -1.09
RPGRIP1-204ENST00000553927 MAGI1Q96QZ7 1491 aaPredicted RBP8.25□□□□□ -1.09
RPGRIP1-204ENST00000553927 MBD3O95983 291 aa8.25□□□□□ -1.09
RPGRIP1-204ENST00000553927 GTF2F1P35269 517 aaKnown RBP eCLIP8.25□□□□□ -1.09
RPGRIP1-204ENST00000553927 IRX5P78411 483 aaPredicted RBP8.25□□□□□ -1.09
RPGRIP1-204ENST00000553927 CCDC27Q2M243 656 aa8.25□□□□□ -1.09
RPGRIP1-204ENST00000553927 USP48Q86UV5 1035 aa8.25□□□□□ -1.09
RPGRIP1-204ENST00000553927 TSPYL6Q8N831 410 aa8.25□□□□□ -1.09
RPGRIP1-204ENST00000553927 ZBTB9Q96C00 473 aa8.25□□□□□ -1.09
RPGRIP1-204ENST00000553927 TMX3Q96JJ7 454 aa8.25□□□□□ -1.09
RPGRIP1-204ENST00000553927 C16orf45Q96MC5 204 aaPredicted RBP8.25□□□□□ -1.09
RPGRIP1-204ENST00000553927 KCNF1Q9H3M0 494 aa8.25□□□□□ -1.09
RPGRIP1-204ENST00000553927 CD109Q6YHK3 1445 aa8.25□□□□□ -1.09
RPGRIP1-204ENST00000553927 AP5Z1O43299 807 aa8.24□□□□□ -1.09
RPGRIP1-204ENST00000553927 SDSP20132 328 aa8.24□□□□□ -1.09
RPGRIP1-204ENST00000553927 TMEM132EQ6IEE7 984 aa8.24□□□□□ -1.09
RPGRIP1-204ENST00000553927 GCC1Q96CN9 775 aa8.24□□□□□ -1.09
RPGRIP1-204ENST00000553927 UPF3BQ9BZI7 483 aaKnown RBP8.24□□□□□ -1.09
RPGRIP1-204ENST00000553927 CWC22Q9HCG8 908 aaKnown RBP8.24□□□□□ -1.09
RPGRIP1-204ENST00000553927 CHMP3Q9Y3E7 222 aa8.24□□□□□ -1.09
RPGRIP1-204ENST00000553927 CEP152O94986 1710 aa8.24□□□□□ -1.09
RPGRIP1-204ENST00000553927 KDM5AP29375 1690 aaKnown RBP8.24□□□□□ -1.09
RPGRIP1-204ENST00000553927 IQGAP1P46940 1657 aa8.24□□□□□ -1.09
RPGRIP1-204ENST00000553927 MADDQ8WXG6 1647 aa8.24□□□□□ -1.09
RPGRIP1-204ENST00000553927 TTC22Q5TAA0 569 aa8.24□□□□□ -1.09
RPGRIP1-204ENST00000553927 GIMAP6Q6P9H5 292 aa8.24□□□□□ -1.09
RPGRIP1-204ENST00000553927 ZNF592Q92610 1267 aa8.24□□□□□ -1.09
RPGRIP1-204ENST00000553927 GGNBP2Q9H3C7 697 aa8.24□□□□□ -1.09
RPGRIP1-204ENST00000553927 ST7Q9NRC1 585 aa8.24□□□□□ -1.09
RPGRIP1-204ENST00000553927 TARBP1Q13395 1621 aaKnown RBP8.24□□□□□ -1.09
RPGRIP1-204ENST00000553927 FBLN1P23142 703 aa8.24□□□□□ -1.09
RPGRIP1-204ENST00000553927 NCBP1Q09161 790 aaKnown RBP8.24□□□□□ -1.09
RPGRIP1-204ENST00000553927 INTS3Q68E01 1043 aaKnown RBP8.24□□□□□ -1.09
RPGRIP1-204ENST00000553927 AEBP1Q8IUX7 1158 aa8.24□□□□□ -1.09
RPGRIP1-204ENST00000553927 IPO4Q8TEX9 1081 aaKnown RBP8.24□□□□□ -1.09
RPGRIP1-204ENST00000553927 SYCP2Q9BX26 1530 aa8.23□□□□□ -1.09
RPGRIP1-204ENST00000553927 NOS1P29475 1434 aa8.23□□□□□ -1.09
RPGRIP1-204ENST00000553927 NUTM2DQ5VT03 806 aaPredicted RBP8.23□□□□□ -1.09
RPGRIP1-204ENST00000553927 CNPY2Q9Y2B0 182 aa8.23□□□□□ -1.09
RPGRIP1-204ENST00000553927 NPHP1O15259 732 aa8.23□□□□□ -1.09
RPGRIP1-204ENST00000553927 SYAP1Q96A49 352 aaPredicted RBP8.23□□□□□ -1.09
RPGRIP1-204ENST00000553927 FBXO3Q9UK99 471 aa8.23□□□□□ -1.09
RPGRIP1-204ENST00000553927 ZNF518AQ6AHZ1 1483 aa8.22□□□□□ -1.09
RPGRIP1-204ENST00000553927 FIBPO43427 364 aa8.22□□□□□ -1.09
RPGRIP1-204ENST00000553927 PTGS1P23219 599 aa8.22□□□□□ -1.09
RPGRIP1-204ENST00000553927 LRMPQ12912 555 aa8.22□□□□□ -1.09
RPGRIP1-204ENST00000553927 CHMP7Q8WUX9 453 aaPredicted RBP8.22□□□□□ -1.09
RPGRIP1-204ENST00000553927 ANKRD7Q92527 254 aa8.22□□□□□ -1.09
RPGRIP1-204ENST00000553927 PALD1Q9ULE6 856 aa8.22□□□□□ -1.09
RPGRIP1-204ENST00000553927 ARHGAP31Q2M1Z3 1444 aa8.22□□□□□ -1.09
RPGRIP1-204ENST00000553927 DIAPH3Q9NSV4 1193 aa8.22□□□□□ -1.09
RPGRIP1-204ENST00000553927 SPTLC3Q9NUV7 552 aa8.22□□□□□ -1.09
RPGRIP1-204ENST00000553927 SPAG9O60271 1321 aaKnown RBP8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms