RNA–Protein interactions for RNA: ENST00000553798.5

PSMC6-204, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 3

Gene PSMC6, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-204ENST00000553798 GGNBP2Q9H3C7 697 aa16.05■□□□□ 0.16
PSMC6-204ENST00000553798 COL18A1P39060 1754 aa16.05■□□□□ 0.16
PSMC6-204ENST00000553798 NRAPQ86VF7 1730 aa16.05■□□□□ 0.16
PSMC6-204ENST00000553798 CAMTA1Q9Y6Y1 1673 aa16.05■□□□□ 0.16
PSMC6-204ENST00000553798 KIF20BQ96Q89 1820 aa16.04■□□□□ 0.16
PSMC6-204ENST00000553798 GJD4Q96KN9 370 aaPredicted RBP16.04■□□□□ 0.16
PSMC6-204ENST00000553798 ABCC6O95255 1503 aa16.04■□□□□ 0.16
PSMC6-204ENST00000553798 CDK12Q9NYV4 1490 aaPredicted RBP16.03■□□□□ 0.16
PSMC6-204ENST00000553798 PER1O15534 1290 aaPredicted RBP16.03■□□□□ 0.16
PSMC6-204ENST00000553798 SOX12O15370 315 aa16.02■□□□□ 0.16
PSMC6-204ENST00000553798 AXIN2Q9Y2T1 843 aa16.02■□□□□ 0.16
PSMC6-204ENST00000553798 KNSTRNQ9Y448 316 aa16.02■□□□□ 0.16
PSMC6-204ENST00000553798 NSD2O96028 1365 aa16.01■□□□□ 0.15
PSMC6-204ENST00000553798 SPATA31A5Q5VU36 1347 aa16■□□□□ 0.15
PSMC6-204ENST00000553798 SPATA31A7Q8IWB4 1347 aa16■□□□□ 0.15
PSMC6-204ENST00000553798 COL5A2P05997 1499 aaPredicted RBP16■□□□□ 0.15
PSMC6-204ENST00000553798 ONECUT3O60422 494 aaPredicted RBP16■□□□□ 0.15
PSMC6-204ENST00000553798 AMER1Q5JTC6 1135 aaPredicted RBP16■□□□□ 0.15
PSMC6-204ENST00000553798 GLI3P10071 1580 aa16■□□□□ 0.15
PSMC6-204ENST00000553798 MAP3K19Q56UN5 1328 aa15.99■□□□□ 0.15
PSMC6-204ENST00000553798 EVA1CP58658 441 aa15.99■□□□□ 0.15
PSMC6-204ENST00000553798 IP6K1Q92551 441 aa15.99■□□□□ 0.15
PSMC6-204ENST00000553798 LTN1O94822 1766 aa15.98■□□□□ 0.15
PSMC6-204ENST00000553798 ZBTB7CA1YPR0 619 aa15.98■□□□□ 0.15
PSMC6-204ENST00000553798 FBLN1P23142 703 aa15.98■□□□□ 0.15
PSMC6-204ENST00000553798 STRN4Q9NRL3 753 aa15.98■□□□□ 0.15
PSMC6-204ENST00000553798 SPATA31A1Q5TZJ5 1347 aa15.97■□□□□ 0.15
PSMC6-204ENST00000553798 ANKRD26Q9UPS8 1709 aa15.97■□□□□ 0.15
PSMC6-204ENST00000553798 LARP1Q6PKG0 1096 aaKnown RBP15.97■□□□□ 0.15
PSMC6-204ENST00000553798 KIF24Q5T7B8 1368 aa15.97■□□□□ 0.15
PSMC6-204ENST00000553798 NPC1L1Q9UHC9 1359 aa15.97■□□□□ 0.15
PSMC6-204ENST00000553798 WDR17Q8IZU2 1322 aa15.96■□□□□ 0.15
PSMC6-204ENST00000553798 BLMP54132 1417 aaPredicted RBP15.96■□□□□ 0.15
PSMC6-204ENST00000553798 NPM3O75607 178 aaKnown RBP15.96■□□□□ 0.15
PSMC6-204ENST00000553798 CCDC9Q9Y3X0 531 aaKnown RBP15.96■□□□□ 0.15
PSMC6-204ENST00000553798 RTL1A6NKG5 1358 aa15.96■□□□□ 0.15
PSMC6-204ENST00000553798 RGPD5Q99666 1765 aa15.95■□□□□ 0.14
PSMC6-204ENST00000553798 RGS12O14924 1447 aa15.95■□□□□ 0.14
PSMC6-204ENST00000553798 HOXC9P31274 260 aa15.95■□□□□ 0.14
PSMC6-204ENST00000553798 RRS1Q15050 365 aaKnown RBP15.95■□□□□ 0.14
PSMC6-204ENST00000553798 ERBB3P21860 1342 aa15.94■□□□□ 0.14
PSMC6-204ENST00000553798 CRB1P82279 1406 aa15.94■□□□□ 0.14
PSMC6-204ENST00000553798 AMPHP49418 695 aa15.94■□□□□ 0.14
PSMC6-204ENST00000553798 BARGINQ6ZT62 677 aa15.94■□□□□ 0.14
PSMC6-204ENST00000553798 THRAP3Q9Y2W1 955 aaKnown RBP15.94■□□□□ 0.14
PSMC6-204ENST00000553798 CARD10Q9BWT7 1032 aa15.93■□□□□ 0.14
PSMC6-204ENST00000553798 POLKQ9UBT6 870 aa15.93■□□□□ 0.14
PSMC6-204ENST00000553798 MORC1Q86VD1 984 aa15.92■□□□□ 0.14
PSMC6-204ENST00000553798 TCP11L2Q8N4U5 519 aa15.92■□□□□ 0.14
PSMC6-204ENST00000553798 FLT4P35916 1363 aa15.91■□□□□ 0.14
PSMC6-204ENST00000553798 FAM98CQ17RN3 349 aaKnown RBP15.91■□□□□ 0.14
PSMC6-204ENST00000553798 TOM1L2Q6ZVM7 507 aa15.91■□□□□ 0.14
PSMC6-204ENST00000553798 SEPT12Q8IYM1 358 aa15.91■□□□□ 0.14
PSMC6-204ENST00000553798 ANKRD24Q8TF21 1146 aa15.91■□□□□ 0.14
PSMC6-204ENST00000553798 EMILIN1Q9Y6C2 1016 aa15.91■□□□□ 0.14
PSMC6-204ENST00000553798 INSRP06213 1382 aa15.9■□□□□ 0.14
PSMC6-204ENST00000553798 MAP2P11137 1827 aaKnown RBP15.9■□□□□ 0.14
PSMC6-204ENST00000553798 CSB-PGBD3P0DP91 1061 aa15.9■□□□□ 0.14
PSMC6-204ENST00000553798 PEAK1Q9H792 1746 aa15.9■□□□□ 0.14
PSMC6-204ENST00000553798 THSD7AQ9UPZ6 1657 aa15.89■□□□□ 0.13
PSMC6-204ENST00000553798 HSP90AB2PQ58FF8 381 aa15.89■□□□□ 0.13
PSMC6-204ENST00000553798 USP35Q9P2H5 1018 aa15.89■□□□□ 0.13
PSMC6-204ENST00000553798 SMG6Q86US8 1419 aaKnown RBP15.88■□□□□ 0.13
PSMC6-204ENST00000553798 SOCS7O14512 581 aa15.88■□□□□ 0.13
PSMC6-204ENST00000553798 TNNT2P45379 298 aaPredicted RBP15.88■□□□□ 0.13
PSMC6-204ENST00000553798 CC2D1BQ5T0F9 858 aaKnown RBP15.88■□□□□ 0.13
PSMC6-204ENST00000553798 NLRP2Q9NX02 1062 aa15.87■□□□□ 0.13
PSMC6-204ENST00000553798 FAM208AQ9UK61 1670 aaKnown RBP15.86■□□□□ 0.13
PSMC6-204ENST00000553798 CDCA7Q9BWT1 371 aaPredicted RBP15.86■□□□□ 0.13
PSMC6-204ENST00000553798 DISP2A7MBM2 1401 aa15.85■□□□□ 0.13
PSMC6-204ENST00000553798 BRWD3Q6RI45 1802 aa15.85■□□□□ 0.13
PSMC6-204ENST00000553798 PPM1GO15355 546 aaPredicted RBP15.85■□□□□ 0.13
PSMC6-204ENST00000553798 LTV1Q96GA3 475 aaPredicted RBP15.85■□□□□ 0.13
PSMC6-204ENST00000553798 DDX10Q13206 875 aaKnown RBP15.84■□□□□ 0.13
PSMC6-204ENST00000553798 KRT27Q7Z3Y8 459 aa15.84■□□□□ 0.13
PSMC6-204ENST00000553798 PARP4Q9UKK3 1724 aaKnown RBP15.83■□□□□ 0.13
PSMC6-204ENST00000553798 A0A0G2JS52 829 aa15.83■□□□□ 0.12
PSMC6-204ENST00000553798 ZNF316A6NFI3 1004 aaPredicted RBP15.83■□□□□ 0.12
PSMC6-204ENST00000553798 MYT1Q01538 1121 aa15.83■□□□□ 0.12
PSMC6-204ENST00000553798 NBPF6Q5VWK0 638 aa15.83■□□□□ 0.12
PSMC6-204ENST00000553798 NBPF4Q96M43 638 aa15.83■□□□□ 0.12
PSMC6-204ENST00000553798 IL2RBP14784 551 aa15.81■□□□□ 0.12
PSMC6-204ENST00000553798 MTHFSP49914 203 aa15.81■□□□□ 0.12
PSMC6-204ENST00000553798 NCAPD2Q15021 1401 aa15.81■□□□□ 0.12
PSMC6-204ENST00000553798 WNK3Q9BYP7 1800 aa15.81■□□□□ 0.12
PSMC6-204ENST00000553798 RGPD2P0DJD1 1756 aa15.8■□□□□ 0.12
PSMC6-204ENST00000553798 EIF4A2Q14240 407 aaKnown RBP15.8■□□□□ 0.12
PSMC6-204ENST00000553798 PDE3BQ13370 1112 aa15.79■□□□□ 0.12
PSMC6-204ENST00000553798 DDB1Q16531 1140 aa15.79■□□□□ 0.12
PSMC6-204ENST00000553798 EYA1Q99502 592 aa15.79■□□□□ 0.12
PSMC6-204ENST00000553798 PARD3Q8TEW0 1356 aa15.78■□□□□ 0.12
PSMC6-204ENST00000553798 UPF1Q92900 1129 aaKnown RBP eCLIP15.78■□□□□ 0.12
PSMC6-204ENST00000553798 LRRC37A3O60309 1634 aa15.78■□□□□ 0.12
PSMC6-204ENST00000553798 EXOC5O00471 708 aa15.77■□□□□ 0.12
PSMC6-204ENST00000553798 CNGB1Q14028 1251 aaPredicted RBP15.77■□□□□ 0.12
PSMC6-204ENST00000553798 IGSF1Q8N6C5 1336 aa15.76■□□□□ 0.11
PSMC6-204ENST00000553798 PPP2R1AP30153 589 aa15.76■□□□□ 0.11
PSMC6-204ENST00000553798 IL13P35225 146 aa15.76■□□□□ 0.11
PSMC6-204ENST00000553798 FAM196AQ6ZSG2 479 aa15.76■□□□□ 0.11
PSMC6-204ENST00000553798 TNS2Q63HR2 1409 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms