RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 CGNL1Q0VF96 1302 aa25.49■■□□□ 1.67
CPSF2-202ENST00000553427 ZBTB7CA1YPR0 619 aa25.48■■□□□ 1.67
CPSF2-202ENST00000553427 AXIN2Q9Y2T1 843 aa25.48■■□□□ 1.67
CPSF2-202ENST00000553427 CRB1P82279 1406 aa25.47■■□□□ 1.67
CPSF2-202ENST00000553427 LTN1O94822 1766 aa25.47■■□□□ 1.67
CPSF2-202ENST00000553427 LARP1Q6PKG0 1096 aaKnown RBP25.47■■□□□ 1.67
CPSF2-202ENST00000553427 GGNBP2Q9H3C7 697 aa25.47■■□□□ 1.67
CPSF2-202ENST00000553427 THSD7AQ9UPZ6 1657 aa25.47■■□□□ 1.67
CPSF2-202ENST00000553427 PANK3Q9H999 370 aa25.46■■□□□ 1.67
CPSF2-202ENST00000553427 CCDC7Q96M83 1385 aa25.45■■□□□ 1.67
CPSF2-202ENST00000553427 WDR17Q8IZU2 1322 aa25.45■■□□□ 1.66
CPSF2-202ENST00000553427 SEPT12Q8IYM1 358 aa25.45■■□□□ 1.66
CPSF2-202ENST00000553427 BLMP54132 1417 aaPredicted RBP25.45■■□□□ 1.66
CPSF2-202ENST00000553427 FAM98CQ17RN3 349 aaKnown RBP25.44■■□□□ 1.66
CPSF2-202ENST00000553427 BARGINQ6ZT62 677 aa25.44■■□□□ 1.66
CPSF2-202ENST00000553427 THRAP3Q9Y2W1 955 aaKnown RBP25.44■■□□□ 1.66
CPSF2-202ENST00000553427 RTL1A6NKG5 1358 aa25.44■■□□□ 1.66
CPSF2-202ENST00000553427 NSD2O96028 1365 aa25.43■■□□□ 1.66
CPSF2-202ENST00000553427 TCP11L2Q8N4U5 519 aa25.42■■□□□ 1.66
CPSF2-202ENST00000553427 MAP3K19Q56UN5 1328 aa25.41■■□□□ 1.66
CPSF2-202ENST00000553427 WASHC2AQ641Q2 1341 aa25.41■■□□□ 1.66
CPSF2-202ENST00000553427 RGPD5Q99666 1765 aa25.41■■□□□ 1.66
CPSF2-202ENST00000553427 ANKRD26Q9UPS8 1709 aa25.4■■□□□ 1.66
CPSF2-202ENST00000553427 ERBB3P21860 1342 aa25.4■■□□□ 1.66
CPSF2-202ENST00000553427 IP6K1Q92551 441 aa25.4■■□□□ 1.66
CPSF2-202ENST00000553427 KIF24Q5T7B8 1368 aa25.4■■□□□ 1.66
CPSF2-202ENST00000553427 BRWD3Q6RI45 1802 aa25.38■■□□□ 1.65
CPSF2-202ENST00000553427 CARD10Q9BWT7 1032 aa25.38■■□□□ 1.65
CPSF2-202ENST00000553427 EP400Q96L91 3159 aa25.37■■□□□ 1.65
CPSF2-202ENST00000553427 TOM1L2Q6ZVM7 507 aa25.37■■□□□ 1.65
CPSF2-202ENST00000553427 USP35Q9P2H5 1018 aa25.36■■□□□ 1.65
CPSF2-202ENST00000553427 HOXC9P31274 260 aa25.35■■□□□ 1.65
CPSF2-202ENST00000553427 KRT27Q7Z3Y8 459 aa25.35■■□□□ 1.65
CPSF2-202ENST00000553427 UPF1Q92900 1129 aaKnown RBP eCLIP25.35■■□□□ 1.65
CPSF2-202ENST00000553427 FAM208AQ9UK61 1670 aaKnown RBP25.35■■□□□ 1.65
CPSF2-202ENST00000553427 A0A0G2JS52 829 aa25.34■■□□□ 1.65
CPSF2-202ENST00000553427 CSB-PGBD3P0DP91 1061 aa25.34■■□□□ 1.65
CPSF2-202ENST00000553427 MYT1Q01538 1121 aa25.34■■□□□ 1.65
CPSF2-202ENST00000553427 ANKRD24Q8TF21 1146 aa25.34■■□□□ 1.65
CPSF2-202ENST00000553427 KNSTRNQ9Y448 316 aa25.34■■□□□ 1.65
CPSF2-202ENST00000553427 PARP4Q9UKK3 1724 aaKnown RBP25.34■■□□□ 1.65
CPSF2-202ENST00000553427 FBLN1P23142 703 aa25.33■■□□□ 1.65
CPSF2-202ENST00000553427 ZEB1P37275 1124 aaPredicted RBP25.33■■□□□ 1.65
CPSF2-202ENST00000553427 AMPHP49418 695 aa25.33■■□□□ 1.65
CPSF2-202ENST00000553427 RRS1Q15050 365 aaKnown RBP25.33■■□□□ 1.65
CPSF2-202ENST00000553427 WNK3Q9BYP7 1800 aa25.33■■□□□ 1.64
CPSF2-202ENST00000553427 FLT4P35916 1363 aa25.32■■□□□ 1.64
CPSF2-202ENST00000553427 DISP2A7MBM2 1401 aa25.32■■□□□ 1.64
CPSF2-202ENST00000553427 CDCA7Q9BWT1 371 aaPredicted RBP25.32■■□□□ 1.64
CPSF2-202ENST00000553427 AMER1Q5JTC6 1135 aaPredicted RBP25.31■■□□□ 1.64
CPSF2-202ENST00000553427 PEAK1Q9H792 1746 aa25.31■■□□□ 1.64
CPSF2-202ENST00000553427 PER1O15534 1290 aaPredicted RBP25.3■■□□□ 1.64
CPSF2-202ENST00000553427 INSRP06213 1382 aa25.3■■□□□ 1.64
CPSF2-202ENST00000553427 NPC1L1Q9UHC9 1359 aa25.28■■□□□ 1.64
CPSF2-202ENST00000553427 LRRC37A3O60309 1634 aa25.27■■□□□ 1.64
CPSF2-202ENST00000553427 SMG6Q86US8 1419 aaKnown RBP25.27■■□□□ 1.64
CPSF2-202ENST00000553427 NLRP2Q9NX02 1062 aa25.26■■□□□ 1.63
CPSF2-202ENST00000553427 CCDC125Q86Z20 511 aa25.25■■□□□ 1.63
CPSF2-202ENST00000553427 EMILIN1Q9Y6C2 1016 aa25.25■■□□□ 1.63
CPSF2-202ENST00000553427 POLKQ9UBT6 870 aa25.24■■□□□ 1.63
CPSF2-202ENST00000553427 MORC1Q86VD1 984 aa25.23■■□□□ 1.63
CPSF2-202ENST00000553427 PDE3BQ13370 1112 aa25.22■■□□□ 1.63
CPSF2-202ENST00000553427 HSP90AB2PQ58FF8 381 aa25.22■■□□□ 1.63
CPSF2-202ENST00000553427 TNS2Q63HR2 1409 aa25.21■■□□□ 1.63
CPSF2-202ENST00000553427 MAP2P11137 1827 aaKnown RBP25.21■■□□□ 1.63
CPSF2-202ENST00000553427 DDB1Q16531 1140 aa25.21■■□□□ 1.63
CPSF2-202ENST00000553427 LTV1Q96GA3 475 aaPredicted RBP25.21■■□□□ 1.63
CPSF2-202ENST00000553427 IL2RBP14784 551 aa25.19■■□□□ 1.62
CPSF2-202ENST00000553427 FAM196AQ6ZSG2 479 aa25.19■■□□□ 1.62
CPSF2-202ENST00000553427 TNNT2P45379 298 aaPredicted RBP25.18■■□□□ 1.62
CPSF2-202ENST00000553427 BCL9O00512 1426 aa25.18■■□□□ 1.62
CPSF2-202ENST00000553427 NCAPD2Q15021 1401 aa25.18■■□□□ 1.62
CPSF2-202ENST00000553427 OVOS2A0A0G2JMS6 1433 aa25.17■■□□□ 1.62
CPSF2-202ENST00000553427 PPM1GO15355 546 aaPredicted RBP25.15■■□□□ 1.62
CPSF2-202ENST00000553427 NBPF6Q5VWK0 638 aa25.15■■□□□ 1.62
CPSF2-202ENST00000553427 NBPF4Q96M43 638 aa25.15■■□□□ 1.62
CPSF2-202ENST00000553427 RGPD2P0DJD1 1756 aa25.14■■□□□ 1.62
CPSF2-202ENST00000553427 EXOC5O00471 708 aa25.14■■□□□ 1.62
CPSF2-202ENST00000553427 FAM182BQ5T319 152 aa25.14■■□□□ 1.62
CPSF2-202ENST00000553427 RGPD1P0DJD0 1748 aa25.14■■□□□ 1.61
CPSF2-202ENST00000553427 CC2D1BQ5T0F9 858 aaKnown RBP25.11■■□□□ 1.61
CPSF2-202ENST00000553427 MARCH10Q8NA82 808 aaPredicted RBP25.11■■□□□ 1.61
CPSF2-202ENST00000553427 MEGF6O75095 1541 aa25.11■■□□□ 1.61
CPSF2-202ENST00000553427 TNS1Q9HBL0 1735 aaKnown RBP25.09■■□□□ 1.61
CPSF2-202ENST00000553427 SF3B2Q13435 895 aaKnown RBP25.09■■□□□ 1.61
CPSF2-202ENST00000553427 EIF4A2Q14240 407 aaKnown RBP25.09■■□□□ 1.61
CPSF2-202ENST00000553427 PLEKHG2Q9H7P9 1386 aa25.07■■□□□ 1.6
CPSF2-202ENST00000553427 USHBP1Q8N6Y0 703 aa25.06■■□□□ 1.6
CPSF2-202ENST00000553427 RAPGEF4Q8WZA2 1011 aa25.06■■□□□ 1.6
CPSF2-202ENST00000553427 EYA1Q99502 592 aa25.05■■□□□ 1.6
CPSF2-202ENST00000553427 IGSF1Q8N6C5 1336 aa25.05■■□□□ 1.6
CPSF2-202ENST00000553427 TRIM37O94972 964 aa25.04■■□□□ 1.6
CPSF2-202ENST00000553427 BAG6P46379 1132 aa25.03■■□□□ 1.6
CPSF2-202ENST00000553427 SHANK3Q9BYB0 1731 aa25.03■■□□□ 1.6
CPSF2-202ENST00000553427 SBF2Q86WG5 1849 aa25.02■■□□□ 1.6
CPSF2-202ENST00000553427 TATP17735 454 aaPredicted RBP25.02■■□□□ 1.6
CPSF2-202ENST00000553427 MTHFSP49914 203 aa25.02■■□□□ 1.6
CPSF2-202ENST00000553427 ZCRB1Q8TBF4 217 aaKnown RBP25.01■■□□□ 1.59
CPSF2-202ENST00000553427 DEFB132Q7Z7B7 95 aa25■■□□□ 1.59
CPSF2-202ENST00000553427 PARD3Q8TEW0 1356 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms