RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 TRPM3Q9HCF6 1732 aaPredicted RBP14.61□□□□□ -0.07
PTCH1-225ENST00000551845 EZH2Q15910 746 aaKnown RBP14.6□□□□□ -0.07
PTCH1-225ENST00000551845 ARHGEF25Q86VW2 580 aa14.6□□□□□ -0.07
PTCH1-225ENST00000551845 CPDO75976 1380 aa14.6□□□□□ -0.07
PTCH1-225ENST00000551845 NRAPQ86VF7 1730 aa14.59□□□□□ -0.07
PTCH1-225ENST00000551845 STRN4Q9NRL3 753 aa14.59□□□□□ -0.07
PTCH1-225ENST00000551845 KNSTRNQ9Y448 316 aa14.58□□□□□ -0.08
PTCH1-225ENST00000551845 CGNL1Q0VF96 1302 aa14.58□□□□□ -0.08
PTCH1-225ENST00000551845 ALS2Q96Q42 1657 aa14.58□□□□□ -0.08
PTCH1-225ENST00000551845 TNS1Q9HBL0 1735 aaKnown RBP14.56□□□□□ -0.08
PTCH1-225ENST00000551845 DCAF8L1A6NGE4 600 aa14.56□□□□□ -0.08
PTCH1-225ENST00000551845 WASHC2AQ641Q2 1341 aa14.56□□□□□ -0.08
PTCH1-225ENST00000551845 AATKQ6ZMQ8 1374 aa14.56□□□□□ -0.08
PTCH1-225ENST00000551845 COL14A1Q05707 1796 aaKnown RBP14.55□□□□□ -0.08
PTCH1-225ENST00000551845 TRIM37O94972 964 aa14.55□□□□□ -0.08
PTCH1-225ENST00000551845 AXIN2Q9Y2T1 843 aa14.55□□□□□ -0.08
PTCH1-225ENST00000551845 DISP2A7MBM2 1401 aa14.55□□□□□ -0.08
PTCH1-225ENST00000551845 NSD3Q9BZ95 1437 aa14.55□□□□□ -0.08
PTCH1-225ENST00000551845 FBLN1P23142 703 aa14.54□□□□□ -0.08
PTCH1-225ENST00000551845 AMPHP49418 695 aa14.54□□□□□ -0.08
PTCH1-225ENST00000551845 PPP1R1BQ9UD71 204 aaPredicted RBP14.54□□□□□ -0.08
PTCH1-225ENST00000551845 CCDC7Q96M83 1385 aa14.54□□□□□ -0.08
PTCH1-225ENST00000551845 SPATA31A5Q5VU36 1347 aa14.53□□□□□ -0.08
PTCH1-225ENST00000551845 SPATA31A7Q8IWB4 1347 aa14.53□□□□□ -0.08
PTCH1-225ENST00000551845 APBA3O96018 575 aa14.53□□□□□ -0.08
PTCH1-225ENST00000551845 CSB-PGBD3P0DP91 1061 aa14.53□□□□□ -0.08
PTCH1-225ENST00000551845 LARP1Q6PKG0 1096 aaKnown RBP14.53□□□□□ -0.08
PTCH1-225ENST00000551845 CAMKK2Q96RR4 588 aa14.53□□□□□ -0.08
PTCH1-225ENST00000551845 FAM196AQ6ZSG2 479 aa14.52□□□□□ -0.09
PTCH1-225ENST00000551845 TOM1L2Q6ZVM7 507 aa14.52□□□□□ -0.09
PTCH1-225ENST00000551845 IP6K1Q92551 441 aa14.52□□□□□ -0.09
PTCH1-225ENST00000551845 USP35Q9P2H5 1018 aa14.52□□□□□ -0.09
PTCH1-225ENST00000551845 AKAP12Q02952 1782 aa14.52□□□□□ -0.09
PTCH1-225ENST00000551845 SLIT3O75094 1523 aa14.51□□□□□ -0.09
PTCH1-225ENST00000551845 PER1O15534 1290 aaPredicted RBP14.51□□□□□ -0.09
PTCH1-225ENST00000551845 NBPF14Q5TI25 921 aa14.51□□□□□ -0.09
PTCH1-225ENST00000551845 MORC1Q86VD1 984 aa14.51□□□□□ -0.09
PTCH1-225ENST00000551845 THSD7AQ9UPZ6 1657 aa14.51□□□□□ -0.09
PTCH1-225ENST00000551845 OVOS2A0A0J9YW53 1432 aa14.5□□□□□ -0.09
PTCH1-225ENST00000551845 OVOS2Q6IE36 1432 aa14.5□□□□□ -0.09
PTCH1-225ENST00000551845 MAP3K19Q56UN5 1328 aa14.5□□□□□ -0.09
PTCH1-225ENST00000551845 SPATA31A1Q5TZJ5 1347 aa14.5□□□□□ -0.09
PTCH1-225ENST00000551845 RRS1Q15050 365 aaKnown RBP14.5□□□□□ -0.09
PTCH1-225ENST00000551845 TCP11L2Q8N4U5 519 aa14.5□□□□□ -0.09
PTCH1-225ENST00000551845 PARD3Q8TEW0 1356 aa14.49□□□□□ -0.09
PTCH1-225ENST00000551845 THRAP3Q9Y2W1 955 aaKnown RBP14.49□□□□□ -0.09
PTCH1-225ENST00000551845 MON2Q7Z3U7 1717 aa14.49□□□□□ -0.09
PTCH1-225ENST00000551845 PIK3C2AO00443 1686 aa14.49□□□□□ -0.09
PTCH1-225ENST00000551845 TNNT2P45379 298 aaPredicted RBP14.48□□□□□ -0.09
PTCH1-225ENST00000551845 BARGINQ6ZT62 677 aa14.48□□□□□ -0.09
PTCH1-225ENST00000551845 SPON1Q9HCB6 807 aa14.48□□□□□ -0.09
PTCH1-225ENST00000551845 WDR17Q8IZU2 1322 aa14.47□□□□□ -0.09
PTCH1-225ENST00000551845 CAMTA1Q9Y6Y1 1673 aa14.47□□□□□ -0.09
PTCH1-225ENST00000551845 PPM1GO15355 546 aaPredicted RBP14.47□□□□□ -0.09
PTCH1-225ENST00000551845 HOXC9P31274 260 aa14.47□□□□□ -0.09
PTCH1-225ENST00000551845 PDE3BQ13370 1112 aa14.47□□□□□ -0.09
PTCH1-225ENST00000551845 AMER1Q5JTC6 1135 aaPredicted RBP14.47□□□□□ -0.09
PTCH1-225ENST00000551845 ANKRD24Q8TF21 1146 aa14.47□□□□□ -0.09
PTCH1-225ENST00000551845 LTV1Q96GA3 475 aaPredicted RBP14.47□□□□□ -0.09
PTCH1-225ENST00000551845 NLRP2Q9NX02 1062 aa14.47□□□□□ -0.09
PTCH1-225ENST00000551845 NRKQ7Z2Y5 1582 aa14.47□□□□□ -0.09
PTCH1-225ENST00000551845 NSD2O96028 1365 aa14.47□□□□□ -0.09
PTCH1-225ENST00000551845 RREB1Q92766 1687 aa14.46□□□□□ -0.09
PTCH1-225ENST00000551845 CARD10Q9BWT7 1032 aa14.46□□□□□ -0.09
PTCH1-225ENST00000551845 NUP188Q5SRE5 1749 aa14.46□□□□□ -0.1
PTCH1-225ENST00000551845 KCNQ2O43526 872 aa14.45□□□□□ -0.1
PTCH1-225ENST00000551845 HSP90AB2PQ58FF8 381 aa14.45□□□□□ -0.1
PTCH1-225ENST00000551845 CC2D1BQ5T0F9 858 aaKnown RBP14.45□□□□□ -0.1
PTCH1-225ENST00000551845 POLKQ9UBT6 870 aa14.45□□□□□ -0.1
PTCH1-225ENST00000551845 CRB1P82279 1406 aa14.44□□□□□ -0.1
PTCH1-225ENST00000551845 CNGB1Q14028 1251 aaPredicted RBP14.44□□□□□ -0.1
PTCH1-225ENST00000551845 CDCA7Q9BWT1 371 aaPredicted RBP14.44□□□□□ -0.1
PTCH1-225ENST00000551845 EMILIN1Q9Y6C2 1016 aa14.44□□□□□ -0.1
PTCH1-225ENST00000551845 PHRF1Q9P1Y6 1649 aaKnown RBP14.44□□□□□ -0.1
PTCH1-225ENST00000551845 COL5A2P05997 1499 aaPredicted RBP14.44□□□□□ -0.1
PTCH1-225ENST00000551845 ERBB3P21860 1342 aa14.43□□□□□ -0.1
PTCH1-225ENST00000551845 NFAT5O94916 1531 aa14.43□□□□□ -0.1
PTCH1-225ENST00000551845 KIF24Q5T7B8 1368 aa14.43□□□□□ -0.1
PTCH1-225ENST00000551845 CRYBG1Q9Y4K1 1723 aa14.43□□□□□ -0.1
PTCH1-225ENST00000551845 DDX10Q13206 875 aaKnown RBP14.42□□□□□ -0.1
PTCH1-225ENST00000551845 EXOC5O00471 708 aa14.41□□□□□ -0.1
PTCH1-225ENST00000551845 MYOM1P52179 1685 aa14.41□□□□□ -0.1
PTCH1-225ENST00000551845 RTL1A6NKG5 1358 aa14.4□□□□□ -0.1
PTCH1-225ENST00000551845 INSRP06213 1382 aa14.4□□□□□ -0.1
PTCH1-225ENST00000551845 FLT4P35916 1363 aa14.4□□□□□ -0.1
PTCH1-225ENST00000551845 NPC1L1Q9UHC9 1359 aa14.39□□□□□ -0.11
PTCH1-225ENST00000551845 IL2RBP14784 551 aa14.39□□□□□ -0.11
PTCH1-225ENST00000551845 DDB1Q16531 1140 aa14.39□□□□□ -0.11
PTCH1-225ENST00000551845 SENP3-EIF4A1A0A087X0R7 540 aa14.38□□□□□ -0.11
PTCH1-225ENST00000551845 ZNF316A6NFI3 1004 aaPredicted RBP14.38□□□□□ -0.11
PTCH1-225ENST00000551845 NBPF6Q5VWK0 638 aa14.38□□□□□ -0.11
PTCH1-225ENST00000551845 NBPF4Q96M43 638 aa14.38□□□□□ -0.11
PTCH1-225ENST00000551845 USP54Q70EL1 1684 aa14.37□□□□□ -0.11
PTCH1-225ENST00000551845 LMO7Q8WWI1 1683 aa14.37□□□□□ -0.11
PTCH1-225ENST00000551845 MTHFSP49914 203 aa14.37□□□□□ -0.11
PTCH1-225ENST00000551845 SMG6Q86US8 1419 aaKnown RBP14.37□□□□□ -0.11
PTCH1-225ENST00000551845 ABCC6O95255 1503 aa14.36□□□□□ -0.11
PTCH1-225ENST00000551845 ZNF784Q8NCA9 323 aaPredicted RBP14.36□□□□□ -0.11
PTCH1-225ENST00000551845 COL18A1P39060 1754 aa14.35□□□□□ -0.11
PTCH1-225ENST00000551845 RAPGEF4Q8WZA2 1011 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms