RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 PHRF1Q9P1Y6 1649 aaKnown RBP24■■□□□ 1.43
CDK4-208ENST00000551706 GCP02774 474 aa24■■□□□ 1.43
CDK4-208ENST00000551706 SPON1Q9HCB6 807 aa24■■□□□ 1.43
CDK4-208ENST00000551706 PRDM11Q9NQV5 511 aa24■■□□□ 1.43
CDK4-208ENST00000551706 SPATA31A1Q5TZJ5 1347 aa23.99■■□□□ 1.43
CDK4-208ENST00000551706 USP31Q70CQ4 1352 aa23.99■■□□□ 1.43
CDK4-208ENST00000551706 NUP188Q5SRE5 1749 aa23.98■■□□□ 1.43
CDK4-208ENST00000551706 KCNH5Q8NCM2 988 aa23.98■■□□□ 1.43
CDK4-208ENST00000551706 CPDO75976 1380 aa23.98■■□□□ 1.43
CDK4-208ENST00000551706 KIAA0232Q92628 1395 aa23.98■■□□□ 1.43
CDK4-208ENST00000551706 SLIT3O75094 1523 aa23.98■■□□□ 1.43
CDK4-208ENST00000551706 ZC3H6P61129 1189 aaKnown RBP23.97■■□□□ 1.43
CDK4-208ENST00000551706 NME9Q86XW9 330 aa23.97■■□□□ 1.43
CDK4-208ENST00000551706 KCNQ2O43526 872 aa23.95■■□□□ 1.42
CDK4-208ENST00000551706 MYOM1P52179 1685 aa23.95■■□□□ 1.42
CDK4-208ENST00000551706 C11orf95C9JLR9 678 aaPredicted RBP23.94■■□□□ 1.42
CDK4-208ENST00000551706 ZEB1P37275 1124 aaPredicted RBP23.92■■□□□ 1.42
CDK4-208ENST00000551706 PDE3BQ13370 1112 aa23.92■■□□□ 1.42
CDK4-208ENST00000551706 KIF7Q2M1P5 1343 aa23.91■■□□□ 1.42
CDK4-208ENST00000551706 STRN4Q9NRL3 753 aa23.91■■□□□ 1.42
CDK4-208ENST00000551706 USP54Q70EL1 1684 aa23.9■■□□□ 1.42
CDK4-208ENST00000551706 CHRNA2Q15822 529 aa23.9■■□□□ 1.42
CDK4-208ENST00000551706 COG3Q96JB2 828 aa23.9■■□□□ 1.42
CDK4-208ENST00000551706 OVOS2A0A0J9YW53 1432 aa23.9■■□□□ 1.42
CDK4-208ENST00000551706 OVOS2Q6IE36 1432 aa23.9■■□□□ 1.42
CDK4-208ENST00000551706 CARD14Q9BXL6 1004 aa23.89■■□□□ 1.41
CDK4-208ENST00000551706 NSD3Q9BZ95 1437 aa23.89■■□□□ 1.41
CDK4-208ENST00000551706 CAMTA1Q9Y6Y1 1673 aa23.89■■□□□ 1.41
CDK4-208ENST00000551706 USP35Q9P2H5 1018 aa23.88■■□□□ 1.41
CDK4-208ENST00000551706 AATKQ6ZMQ8 1374 aa23.88■■□□□ 1.41
CDK4-208ENST00000551706 FYB1O15117 783 aa23.87■■□□□ 1.41
CDK4-208ENST00000551706 SOX12O15370 315 aa23.87■■□□□ 1.41
CDK4-208ENST00000551706 BARGINQ6ZT62 677 aa23.87■■□□□ 1.41
CDK4-208ENST00000551706 ARHGEF25Q86VW2 580 aa23.87■■□□□ 1.41
CDK4-208ENST00000551706 PANK3Q9H999 370 aa23.86■■□□□ 1.41
CDK4-208ENST00000551706 CGNL1Q0VF96 1302 aa23.85■■□□□ 1.41
CDK4-208ENST00000551706 NFAT5O94916 1531 aa23.85■■□□□ 1.41
CDK4-208ENST00000551706 ZBTB7CA1YPR0 619 aa23.85■■□□□ 1.41
CDK4-208ENST00000551706 ZNF784Q8NCA9 323 aaPredicted RBP23.85■■□□□ 1.41
CDK4-208ENST00000551706 EVA1CP58658 441 aa23.84■■□□□ 1.41
CDK4-208ENST00000551706 CCDC7Q96M83 1385 aa23.83■■□□□ 1.41
CDK4-208ENST00000551706 GGNBP2Q9H3C7 697 aa23.83■■□□□ 1.41
CDK4-208ENST00000551706 LMO7Q8WWI1 1683 aa23.82■■□□□ 1.4
CDK4-208ENST00000551706 SENP3-EIF4A1A0A087X0R7 540 aa23.81■■□□□ 1.4
CDK4-208ENST00000551706 WASHC2AQ641Q2 1341 aa23.81■■□□□ 1.4
CDK4-208ENST00000551706 ABCC6O95255 1503 aa23.8■■□□□ 1.4
CDK4-208ENST00000551706 COL5A2P05997 1499 aaPredicted RBP23.79■■□□□ 1.4
CDK4-208ENST00000551706 UTRNP46939 3433 aa23.79■■□□□ 1.4
CDK4-208ENST00000551706 TCP11L2Q8N4U5 519 aa23.78■■□□□ 1.4
CDK4-208ENST00000551706 KNSTRNQ9Y448 316 aa23.77■■□□□ 1.4
CDK4-208ENST00000551706 KIF20BQ96Q89 1820 aa23.77■■□□□ 1.4
CDK4-208ENST00000551706 IFFO2Q5TF58 517 aa23.76■■□□□ 1.39
CDK4-208ENST00000551706 LARP1Q6PKG0 1096 aaKnown RBP23.76■■□□□ 1.39
CDK4-208ENST00000551706 AXIN2Q9Y2T1 843 aa23.76■■□□□ 1.39
CDK4-208ENST00000551706 NSD2O96028 1365 aa23.76■■□□□ 1.39
CDK4-208ENST00000551706 COL18A1P39060 1754 aa23.75■■□□□ 1.39
CDK4-208ENST00000551706 CASZ1Q86V15 1759 aa23.75■■□□□ 1.39
CDK4-208ENST00000551706 THRAP3Q9Y2W1 955 aaKnown RBP23.74■■□□□ 1.39
CDK4-208ENST00000551706 RGPD3A6NKT7 1758 aaPredicted RBP23.73■■□□□ 1.39
CDK4-208ENST00000551706 RGPD4Q7Z3J3 1758 aa23.73■■□□□ 1.39
CDK4-208ENST00000551706 PLSCR1O15162 318 aa23.73■■□□□ 1.39
CDK4-208ENST00000551706 C1QTNF8P60827 252 aa23.73■■□□□ 1.39
CDK4-208ENST00000551706 IP6K1Q92551 441 aa23.72■■□□□ 1.39
CDK4-208ENST00000551706 ANO8Q9HCE9 1232 aaPredicted RBP23.72■■□□□ 1.39
CDK4-208ENST00000551706 MAP3K19Q56UN5 1328 aa23.72■■□□□ 1.39
CDK4-208ENST00000551706 WDR17Q8IZU2 1322 aa23.72■■□□□ 1.39
CDK4-208ENST00000551706 CRB1P82279 1406 aa23.72■■□□□ 1.39
CDK4-208ENST00000551706 PARP4Q9UKK3 1724 aaKnown RBP23.71■■□□□ 1.39
CDK4-208ENST00000551706 AMPHP49418 695 aa23.71■■□□□ 1.39
CDK4-208ENST00000551706 OVOS2A0A0G2JMS6 1433 aa23.7■■□□□ 1.38
CDK4-208ENST00000551706 RTL1A6NKG5 1358 aa23.7■■□□□ 1.38
CDK4-208ENST00000551706 ZBTB7AO95365 584 aa23.7■■□□□ 1.38
CDK4-208ENST00000551706 CSB-PGBD3P0DP91 1061 aa23.7■■□□□ 1.38
CDK4-208ENST00000551706 TOM1L2Q6ZVM7 507 aa23.7■■□□□ 1.38
CDK4-208ENST00000551706 PDGFDQ9GZP0 370 aaPredicted RBP23.7■■□□□ 1.38
CDK4-208ENST00000551706 LTN1O94822 1766 aa23.7■■□□□ 1.38
CDK4-208ENST00000551706 KIF24Q5T7B8 1368 aa23.69■■□□□ 1.38
CDK4-208ENST00000551706 ERBB3P21860 1342 aa23.68■■□□□ 1.38
CDK4-208ENST00000551706 FBLN1P23142 703 aa23.68■■□□□ 1.38
CDK4-208ENST00000551706 PTGER2P43116 358 aa23.68■■□□□ 1.38
CDK4-208ENST00000551706 RRS1Q15050 365 aaKnown RBP23.68■■□□□ 1.38
CDK4-208ENST00000551706 PER1O15534 1290 aaPredicted RBP23.67■■□□□ 1.38
CDK4-208ENST00000551706 HOXC9P31274 260 aa23.67■■□□□ 1.38
CDK4-208ENST00000551706 BCL11BQ9C0K0 894 aaPredicted RBP23.67■■□□□ 1.38
CDK4-208ENST00000551706 PEAK1Q9H792 1746 aa23.67■■□□□ 1.38
CDK4-208ENST00000551706 CHD4Q14839 1912 aa23.67■■□□□ 1.38
CDK4-208ENST00000551706 AMER1Q5JTC6 1135 aaPredicted RBP23.66■■□□□ 1.38
CDK4-208ENST00000551706 ANKRD24Q8TF21 1146 aa23.66■■□□□ 1.38
CDK4-208ENST00000551706 SYT17Q9BSW7 474 aa23.66■■□□□ 1.38
CDK4-208ENST00000551706 CARD10Q9BWT7 1032 aa23.66■■□□□ 1.38
CDK4-208ENST00000551706 FHDC1Q9C0D6 1143 aaPredicted RBP23.65■■□□□ 1.38
CDK4-208ENST00000551706 ATF5Q9Y2D1 282 aaPredicted RBP23.65■■□□□ 1.38
CDK4-208ENST00000551706 SBF2Q86WG5 1849 aa23.65■■□□□ 1.38
CDK4-208ENST00000551706 MORC1Q86VD1 984 aa23.64■■□□□ 1.37
CDK4-208ENST00000551706 ANKRD26Q9UPS8 1709 aa23.64■■□□□ 1.37
CDK4-208ENST00000551706 FLT4P35916 1363 aa23.64■■□□□ 1.37
CDK4-208ENST00000551706 NPC1L1Q9UHC9 1359 aa23.62■■□□□ 1.37
CDK4-208ENST00000551706 RGPD5Q99666 1765 aa23.61■■□□□ 1.37
CDK4-208ENST00000551706 PROM2Q8N271 834 aa23.61■■□□□ 1.37
CDK4-208ENST00000551706 CDCA7Q9BWT1 371 aaPredicted RBP23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms