RNA–Protein interactions for RNA: ENST00000549876.5

CCDC38-208, Transcript of coiled-coil domain containing 38, humanhuman

TSL 5

Gene CCDC38, Length 499 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-208ENST00000549876 FKBPLQ9UIM3 349 aa10.82□□□□□ -0.68
CCDC38-208ENST00000549876 PPP1R26Q5T8A7 1209 aaPredicted RBP10.81□□□□□ -0.68
CCDC38-208ENST00000549876 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.81□□□□□ -0.68
CCDC38-208ENST00000549876 SH3D19Q5HYK7 790 aa10.8□□□□□ -0.68
CCDC38-208ENST00000549876 PPP2R2DQ66LE6 453 aa10.8□□□□□ -0.68
CCDC38-208ENST00000549876 Q6ZVU0 165 aa10.8□□□□□ -0.68
CCDC38-208ENST00000549876 ARHGAP9Q9BRR9 750 aa10.8□□□□□ -0.68
CCDC38-208ENST00000549876 PROCA1Q8NCQ7 364 aaPredicted RBP10.79□□□□□ -0.68
CCDC38-208ENST00000549876 OCSTAMPQ9BR26 566 aa10.79□□□□□ -0.68
CCDC38-208ENST00000549876 ZC3H4Q9UPT8 1303 aaKnown RBP10.79□□□□□ -0.68
CCDC38-208ENST00000549876 CBLBQ13191 982 aa10.78□□□□□ -0.68
CCDC38-208ENST00000549876 NR6A1Q15406 480 aa10.78□□□□□ -0.68
CCDC38-208ENST00000549876 TTLL8A6PVC2 850 aa10.77□□□□□ -0.69
CCDC38-208ENST00000549876 KCTD15Q96SI1 283 aaPredicted RBP10.77□□□□□ -0.69
CCDC38-208ENST00000549876 KDM4CQ9H3R0 1056 aa10.77□□□□□ -0.69
CCDC38-208ENST00000549876 GPBP1L1Q9HC44 474 aaPredicted RBP10.77□□□□□ -0.69
CCDC38-208ENST00000549876 PGPEP1Q9NXJ5 209 aa10.77□□□□□ -0.69
CCDC38-208ENST00000549876 CDV3Q9UKY7 258 aaKnown RBP10.77□□□□□ -0.69
CCDC38-208ENST00000549876 SLC24A1O60721 1099 aa10.76□□□□□ -0.69
CCDC38-208ENST00000549876 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.76□□□□□ -0.69
CCDC38-208ENST00000549876 SLC10A4Q96EP9 437 aa10.76□□□□□ -0.69
CCDC38-208ENST00000549876 FAM117AQ9C073 453 aa10.76□□□□□ -0.69
CCDC38-208ENST00000549876 SPINT1O43278 529 aa10.75□□□□□ -0.69
CCDC38-208ENST00000549876 DDRGK1Q96HY6 314 aa10.75□□□□□ -0.69
CCDC38-208ENST00000549876 ZBTB33Q86T24 672 aa10.74□□□□□ -0.69
CCDC38-208ENST00000549876 GPSM3Q9Y4H4 160 aa10.74□□□□□ -0.69
CCDC38-208ENST00000549876 PTSQ03393 145 aa10.73□□□□□ -0.69
CCDC38-208ENST00000549876 DHX9Q08211 1270 aaKnown RBP10.73□□□□□ -0.69
CCDC38-208ENST00000549876 INTS6LQ5JSJ4 861 aaKnown RBP10.73□□□□□ -0.69
CCDC38-208ENST00000549876 GPR161Q8N6U8 529 aaKnown RBP10.73□□□□□ -0.69
CCDC38-208ENST00000549876 PTK2Q05397 1052 aa10.72□□□□□ -0.69
CCDC38-208ENST00000549876 FIGNL2A6NMB9 653 aa10.71□□□□□ -0.69
CCDC38-208ENST00000549876 KRT76Q01546 638 aa10.71□□□□□ -0.69
CCDC38-208ENST00000549876 EPS8L1Q8TE68 723 aa10.71□□□□□ -0.69
CCDC38-208ENST00000549876 AP1G2O75843 785 aa10.7□□□□□ -0.7
CCDC38-208ENST00000549876 ADAM32Q8TC27 787 aa10.7□□□□□ -0.7
CCDC38-208ENST00000549876 NANOS1Q8WY41 292 aaKnown RBP10.69□□□□□ -0.7
CCDC38-208ENST00000549876 AGBL1Q96MI9 1066 aa10.69□□□□□ -0.7
CCDC38-208ENST00000549876 HMX1Q9NP08 348 aaPredicted RBP10.69□□□□□ -0.7
CCDC38-208ENST00000549876 SLC35F4A4IF30 521 aa10.67□□□□□ -0.7
CCDC38-208ENST00000549876 CCDC155Q8N6L0 562 aa10.67□□□□□ -0.7
CCDC38-208ENST00000549876 USP17L8P0C7I0 530 aa10.66□□□□□ -0.7
CCDC38-208ENST00000549876 CTSOP43234 321 aaPredicted RBP10.66□□□□□ -0.7
CCDC38-208ENST00000549876 RELBQ01201 579 aa10.65□□□□□ -0.7
CCDC38-208ENST00000549876 CNTNAP3BQ96NU0 1288 aa10.65□□□□□ -0.7
CCDC38-208ENST00000549876 INSM2Q96T92 566 aaPredicted RBP10.65□□□□□ -0.7
CCDC38-208ENST00000549876 CNTNAP3Q9BZ76 1288 aa10.65□□□□□ -0.7
CCDC38-208ENST00000549876 TMPRSS4Q9NRS4 437 aa10.65□□□□□ -0.7
CCDC38-208ENST00000549876 ATP1B4Q9UN42 357 aaPredicted RBP10.65□□□□□ -0.7
CCDC38-208ENST00000549876 NBPF20Q3BBV1 942 aa10.64□□□□□ -0.71
CCDC38-208ENST00000549876 KCNMA1Q12791 1236 aa10.63□□□□□ -0.71
CCDC38-208ENST00000549876 ZNF784Q8NCA9 323 aaPredicted RBP10.63□□□□□ -0.71
CCDC38-208ENST00000549876 COL25A1Q9BXS0 654 aaPredicted RBP10.63□□□□□ -0.71
CCDC38-208ENST00000549876 ESPNB1AK53 854 aa10.62□□□□□ -0.71
CCDC38-208ENST00000549876 ERVH48-1M5A8F1 160 aa10.62□□□□□ -0.71
CCDC38-208ENST00000549876 LILRA1O75019 489 aa10.62□□□□□ -0.71
CCDC38-208ENST00000549876 ITGA6P23229 1130 aa10.62□□□□□ -0.71
CCDC38-208ENST00000549876 ADD1P35611 737 aaKnown RBP10.62□□□□□ -0.71
CCDC38-208ENST00000549876 RFC5P40937 340 aa10.62□□□□□ -0.71
CCDC38-208ENST00000549876 GSK3AP49840 483 aa10.62□□□□□ -0.71
CCDC38-208ENST00000549876 KDF1Q8NAX2 398 aaPredicted RBP10.62□□□□□ -0.71
CCDC38-208ENST00000549876 PNMA1Q8ND90 353 aa10.62□□□□□ -0.71
CCDC38-208ENST00000549876 RNF217Q8TC41 542 aa10.62□□□□□ -0.71
CCDC38-208ENST00000549876 ADH1AP07327 375 aa10.61□□□□□ -0.71
CCDC38-208ENST00000549876 RNFT1Q5M7Z0 435 aa10.61□□□□□ -0.71
CCDC38-208ENST00000549876 ZNF395Q9H8N7 513 aaPredicted RBP10.61□□□□□ -0.71
CCDC38-208ENST00000549876 SENP3-EIF4A1A0A087X0R7 540 aa10.6□□□□□ -0.71
CCDC38-208ENST00000549876 DZIP3Q86Y13 1208 aaKnown RBP10.6□□□□□ -0.71
CCDC38-208ENST00000549876 BCANQ96GW7 911 aa10.6□□□□□ -0.71
CCDC38-208ENST00000549876 TRIM34Q9BYJ4 488 aa10.6□□□□□ -0.71
CCDC38-208ENST00000549876 POLMQ9NP87 494 aaPredicted RBP10.6□□□□□ -0.71
CCDC38-208ENST00000549876 FOXD4L5Q5VV16 416 aaPredicted RBP10.59□□□□□ -0.71
CCDC38-208ENST00000549876 PTGIRP43119 386 aa10.58□□□□□ -0.72
CCDC38-208ENST00000549876 RAB15P59190 212 aa10.58□□□□□ -0.72
CCDC38-208ENST00000549876 VWA5B2Q8N398 1253 aa10.58□□□□□ -0.72
CCDC38-208ENST00000549876 GOPCQ9HD26 462 aa10.58□□□□□ -0.72
CCDC38-208ENST00000549876 ZNF385CQ66K41 422 aaPredicted RBP10.56□□□□□ -0.72
CCDC38-208ENST00000549876 SV2AQ7L0J3 742 aa10.56□□□□□ -0.72
CCDC38-208ENST00000549876 SEPT12Q8IYM1 358 aa10.56□□□□□ -0.72
CCDC38-208ENST00000549876 ADAMTS8Q9UP79 889 aa10.56□□□□□ -0.72
CCDC38-208ENST00000549876 SLURP2P0DP57 97 aa10.55□□□□□ -0.72
CCDC38-208ENST00000549876 CDC14CA4D256 554 aa10.54□□□□□ -0.72
CCDC38-208ENST00000549876 TMEM259Q4ZIN3 620 aa10.53□□□□□ -0.72
CCDC38-208ENST00000549876 WHAMMQ8TF30 809 aa10.52□□□□□ -0.73
CCDC38-208ENST00000549876 GJD4Q96KN9 370 aaPredicted RBP10.52□□□□□ -0.73
CCDC38-208ENST00000549876 LYSMD3Q7Z3D4 306 aa10.51□□□□□ -0.73
CCDC38-208ENST00000549876 PCMTD1Q96MG8 357 aaPredicted RBP10.51□□□□□ -0.73
CCDC38-208ENST00000549876 CYLDQ9NQC7 956 aa10.51□□□□□ -0.73
CCDC38-208ENST00000549876 ZBBXA8MT70 800 aa10.5□□□□□ -0.73
CCDC38-208ENST00000549876 ARHGEF15O94989 841 aa10.5□□□□□ -0.73
CCDC38-208ENST00000549876 RNF144AP50876 292 aaPredicted RBP10.5□□□□□ -0.73
CCDC38-208ENST00000549876 RASSF7Q02833 373 aa10.5□□□□□ -0.73
CCDC38-208ENST00000549876 SVOPQ8N4V2 548 aa10.5□□□□□ -0.73
CCDC38-208ENST00000549876 CUEDC1Q9NWM3 386 aaPredicted RBP10.5□□□□□ -0.73
CCDC38-208ENST00000549876 GIGYF1O75420 1035 aaPredicted RBP10.49□□□□□ -0.73
CCDC38-208ENST00000549876 KCTD17Q8N5Z5 321 aa10.49□□□□□ -0.73
CCDC38-208ENST00000549876 FBXO45P0C2W1 286 aa10.48□□□□□ -0.73
CCDC38-208ENST00000549876 TMEM151AQ8N4L1 468 aa10.48□□□□□ -0.73
CCDC38-208ENST00000549876 RNF225M0QZC1 329 aaPredicted RBP10.47□□□□□ -0.73
CCDC38-208ENST00000549876 TRIM52Q96A61 297 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms