RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 U2AF1Q01081 240 aaKnown RBP eCLIP23.13■■□□□ 1.29
LETMD1-220ENST00000549686 EIF4A2Q14240 407 aaKnown RBP23.13■■□□□ 1.29
LETMD1-220ENST00000549686 SHPRHQ149N8 1683 aa23.13■■□□□ 1.29
LETMD1-220ENST00000549686 U2SURPO15042 1029 aaKnown RBP23.12■■□□□ 1.29
LETMD1-220ENST00000549686 PLEKHG5O94827 1062 aa23.12■■□□□ 1.29
LETMD1-220ENST00000549686 ZC3H6P61129 1189 aaKnown RBP23.12■■□□□ 1.29
LETMD1-220ENST00000549686 LTN1O94822 1766 aa23.1■■□□□ 1.29
LETMD1-220ENST00000549686 KIAA0232Q92628 1395 aa23.1■■□□□ 1.29
LETMD1-220ENST00000549686 JCADQ9P266 1359 aa23.1■■□□□ 1.29
LETMD1-220ENST00000549686 ZBTB7CA1YPR0 619 aa23.09■■□□□ 1.29
LETMD1-220ENST00000549686 FCHSD2O94868 740 aa23.09■■□□□ 1.29
LETMD1-220ENST00000549686 YTHDC1Q96MU7 727 aaKnown RBP23.09■■□□□ 1.29
LETMD1-220ENST00000549686 PRDM11Q9NQV5 511 aa23.08■■□□□ 1.29
LETMD1-220ENST00000549686 HNRNPUQ00839 825 aaKnown RBP eCLIP23.07■■□□□ 1.28
LETMD1-220ENST00000549686 ABCA3Q99758 1704 aa23.07■■□□□ 1.28
LETMD1-220ENST00000549686 NGEFQ8N5V2 710 aa23.06■■□□□ 1.28
LETMD1-220ENST00000549686 RUNDC1Q96C34 613 aa23.06■■□□□ 1.28
LETMD1-220ENST00000549686 IGSF1Q8N6C5 1336 aa23.05■■□□□ 1.28
LETMD1-220ENST00000549686 NEFMP07197 916 aa23.04■■□□□ 1.28
LETMD1-220ENST00000549686 ANKRD24Q8TF21 1146 aa23.03■■□□□ 1.28
LETMD1-220ENST00000549686 ERBB3P21860 1342 aa23.03■■□□□ 1.28
LETMD1-220ENST00000549686 SPATA31A6Q5VVP1 1343 aa23.03■■□□□ 1.28
LETMD1-220ENST00000549686 NCBP3Q53F19 620 aaKnown RBP23.02■■□□□ 1.28
LETMD1-220ENST00000549686 RSPH6AQ9H0K4 717 aa23.02■■□□□ 1.28
LETMD1-220ENST00000549686 AXIN2Q9Y2T1 843 aa23.02■■□□□ 1.28
LETMD1-220ENST00000549686 HSPA1LP34931 641 aa23.01■■□□□ 1.27
LETMD1-220ENST00000549686 CHRNA2Q15822 529 aa23.01■■□□□ 1.27
LETMD1-220ENST00000549686 LTV1Q96GA3 475 aaPredicted RBP23.01■■□□□ 1.27
LETMD1-220ENST00000549686 EYA1Q99502 592 aa23.01■■□□□ 1.27
LETMD1-220ENST00000549686 MAPK8IP3Q9UPT6 1336 aa23.01■■□□□ 1.27
LETMD1-220ENST00000549686 KDRP35968 1356 aa23.01■■□□□ 1.27
LETMD1-220ENST00000549686 RGPD1P0DJD0 1748 aa23■■□□□ 1.27
LETMD1-220ENST00000549686 COL18A1P39060 1754 aa23■■□□□ 1.27
LETMD1-220ENST00000549686 SULT6B1Q6IMI4 303 aa23■■□□□ 1.27
LETMD1-220ENST00000549686 PLEKHF1Q96S99 279 aa23■■□□□ 1.27
LETMD1-220ENST00000549686 ZBED9Q6R2W3 1325 aa23■■□□□ 1.27
LETMD1-220ENST00000549686 CCDC146Q8IYE0 955 aa22.99■■□□□ 1.27
LETMD1-220ENST00000549686 FAM83GA6ND36 823 aa22.98■■□□□ 1.27
LETMD1-220ENST00000549686 HMOX1P09601 288 aa22.98■■□□□ 1.27
LETMD1-220ENST00000549686 PRKAR2BP31323 418 aa22.98■■□□□ 1.27
LETMD1-220ENST00000549686 LMO7Q8WWI1 1683 aa22.97■■□□□ 1.27
LETMD1-220ENST00000549686 NCAPD2Q15021 1401 aa22.96■■□□□ 1.27
LETMD1-220ENST00000549686 COL14A1Q05707 1796 aaKnown RBP22.96■■□□□ 1.27
LETMD1-220ENST00000549686 APAF1O14727 1248 aa22.95■■□□□ 1.26
LETMD1-220ENST00000549686 CSB-PGBD3P0DP91 1061 aa22.95■■□□□ 1.26
LETMD1-220ENST00000549686 CAMTA1Q9Y6Y1 1673 aa22.94■■□□□ 1.26
LETMD1-220ENST00000549686 COL5A2P05997 1499 aaPredicted RBP22.94■■□□□ 1.26
LETMD1-220ENST00000549686 PLEKHG2Q9H7P9 1386 aa22.94■■□□□ 1.26
LETMD1-220ENST00000549686 WDR17Q8IZU2 1322 aa22.94■■□□□ 1.26
LETMD1-220ENST00000549686 NBPF6Q5VWK0 638 aa22.94■■□□□ 1.26
LETMD1-220ENST00000549686 TCP11L2Q8N4U5 519 aa22.94■■□□□ 1.26
LETMD1-220ENST00000549686 NBPF4Q96M43 638 aa22.94■■□□□ 1.26
LETMD1-220ENST00000549686 FAM208AQ9UK61 1670 aaKnown RBP22.93■■□□□ 1.26
LETMD1-220ENST00000549686 NUTM2BA6NNL0 878 aaPredicted RBP22.93■■□□□ 1.26
LETMD1-220ENST00000549686 NUTM2EB1AL46 878 aaPredicted RBP22.93■■□□□ 1.26
LETMD1-220ENST00000549686 AEBP1Q8IUX7 1158 aa22.93■■□□□ 1.26
LETMD1-220ENST00000549686 NUTM2AQ8IVF1 878 aaPredicted RBP22.93■■□□□ 1.26
LETMD1-220ENST00000549686 CENPBP07199 599 aaPredicted RBP22.92■■□□□ 1.26
LETMD1-220ENST00000549686 EVA1CP58658 441 aa22.92■■□□□ 1.26
LETMD1-220ENST00000549686 ADAMTS2O95450 1211 aa22.91■■□□□ 1.26
LETMD1-220ENST00000549686 CCDC27Q2M243 656 aa22.91■■□□□ 1.26
LETMD1-220ENST00000549686 NLRP2Q9NX02 1062 aa22.91■■□□□ 1.26
LETMD1-220ENST00000549686 BTG4Q9NY30 223 aa22.9■■□□□ 1.26
LETMD1-220ENST00000549686 TMPOP42166 694 aaKnown RBP22.89■■□□□ 1.25
LETMD1-220ENST00000549686 NFE2L2Q16236 605 aa22.89■■□□□ 1.25
LETMD1-220ENST00000549686 PDE3BQ13370 1112 aa22.88■■□□□ 1.25
LETMD1-220ENST00000549686 TOM1L2Q6ZVM7 507 aa22.88■■□□□ 1.25
LETMD1-220ENST00000549686 FBXO41Q8TF61 875 aa22.88■■□□□ 1.25
LETMD1-220ENST00000549686 CARD10Q9BWT7 1032 aa22.88■■□□□ 1.25
LETMD1-220ENST00000549686 LMOD3Q0VAK6 560 aa22.87■■□□□ 1.25
LETMD1-220ENST00000549686 GAS2L2Q8NHY3 880 aa22.87■■□□□ 1.25
LETMD1-220ENST00000549686 PHACTR3Q96KR7 559 aa22.87■■□□□ 1.25
LETMD1-220ENST00000549686 RGPD5Q99666 1765 aa22.86■■□□□ 1.25
LETMD1-220ENST00000549686 CRB1P82279 1406 aa22.86■■□□□ 1.25
LETMD1-220ENST00000549686 USHBP1Q8N6Y0 703 aa22.86■■□□□ 1.25
LETMD1-220ENST00000549686 PHF23Q9BUL5 403 aaPredicted RBP22.86■■□□□ 1.25
LETMD1-220ENST00000549686 AMOTQ4VCS5 1084 aa22.85■■□□□ 1.25
LETMD1-220ENST00000549686 RAPGEF4Q8WZA2 1011 aa22.85■■□□□ 1.25
LETMD1-220ENST00000549686 STRN4Q9NRL3 753 aa22.85■■□□□ 1.25
LETMD1-220ENST00000549686 SLIT2O94813 1529 aa22.84■■□□□ 1.25
LETMD1-220ENST00000549686 RIPK4P57078 832 aa22.84■■□□□ 1.25
LETMD1-220ENST00000549686 ZNF521Q96K83 1311 aa22.83■■□□□ 1.25
LETMD1-220ENST00000549686 PLEKHO1Q53GL0 409 aaPredicted RBP22.83■■□□□ 1.25
LETMD1-220ENST00000549686 LARP1Q6PKG0 1096 aaKnown RBP22.83■■□□□ 1.25
LETMD1-220ENST00000549686 SALL2Q9Y467 1007 aaPredicted RBP22.83■■□□□ 1.25
LETMD1-220ENST00000549686 TATP17735 454 aaPredicted RBP22.82■■□□□ 1.24
LETMD1-220ENST00000549686 NEUROD2Q15784 382 aa22.82■■□□□ 1.24
LETMD1-220ENST00000549686 WWC1Q8IX03 1113 aa22.82■■□□□ 1.24
LETMD1-220ENST00000549686 NGLY1Q96IV0 654 aa22.82■■□□□ 1.24
LETMD1-220ENST00000549686 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.82■■□□□ 1.24
LETMD1-220ENST00000549686 RRP7AQ9Y3A4 280 aaKnown RBP22.82■■□□□ 1.24
LETMD1-220ENST00000549686 NWD2Q9ULI1 1742 aa22.82■■□□□ 1.24
LETMD1-220ENST00000549686 LRP6O75581 1613 aa22.82■■□□□ 1.24
LETMD1-220ENST00000549686 MEX3CQ5U5Q3 659 aaKnown RBP22.81■■□□□ 1.24
LETMD1-220ENST00000549686 WDR63Q8IWG1 891 aa22.81■■□□□ 1.24
LETMD1-220ENST00000549686 FNBP4Q8N3X1 1017 aaPredicted RBP22.81■■□□□ 1.24
LETMD1-220ENST00000549686 PLCH1Q4KWH8 1693 aa22.81■■□□□ 1.24
LETMD1-220ENST00000549686 HTATSF1O43719 755 aaKnown RBP22.8■■□□□ 1.24
LETMD1-220ENST00000549686 CALD1Q05682 793 aaKnown RBP22.8■■□□□ 1.24
LETMD1-220ENST00000549686 C8orf37Q96NL8 207 aa22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms