RNA–Protein interactions for RNA: ENST00000546983.1

NKX2-1-205, Transcript of NK2 homeobox 1, humanhuman

TSL 4

Gene NKX2-1, Length 653 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-205ENST00000546983 CAMTA1Q9Y6Y1 1673 aa34.91■■■■□ 3.18
NKX2-1-205ENST00000546983 ONECUT3O60422 494 aaPredicted RBP34.9■■■■□ 3.18
NKX2-1-205ENST00000546983 THRAP3Q9Y2W1 955 aaKnown RBP34.89■■■■□ 3.18
NKX2-1-205ENST00000546983 COL5A2P05997 1499 aaPredicted RBP34.88■■■■□ 3.17
NKX2-1-205ENST00000546983 KIF24Q5T7B8 1368 aa34.87■■■■□ 3.17
NKX2-1-205ENST00000546983 SPATA31A1Q5TZJ5 1347 aa34.86■■■■□ 3.17
NKX2-1-205ENST00000546983 RGS12O14924 1447 aa34.86■■■■□ 3.17
NKX2-1-205ENST00000546983 BLMP54132 1417 aaPredicted RBP34.86■■■■□ 3.17
NKX2-1-205ENST00000546983 WASHC2AQ641Q2 1341 aa34.85■■■■□ 3.17
NKX2-1-205ENST00000546983 KIF20BQ96Q89 1820 aa34.85■■■■□ 3.17
NKX2-1-205ENST00000546983 RTL1A6NKG5 1358 aa34.85■■■■□ 3.17
NKX2-1-205ENST00000546983 WDR17Q8IZU2 1322 aa34.84■■■■□ 3.17
NKX2-1-205ENST00000546983 CRB1P82279 1406 aa34.84■■■■□ 3.17
NKX2-1-205ENST00000546983 GLI3P10071 1580 aa34.83■■■■□ 3.17
NKX2-1-205ENST00000546983 BARGINQ6ZT62 677 aa34.83■■■■□ 3.17
NKX2-1-205ENST00000546983 IP6K1Q92551 441 aa34.83■■■■□ 3.17
NKX2-1-205ENST00000546983 AMPHP49418 695 aa34.82■■■■□ 3.16
NKX2-1-205ENST00000546983 TCP11L2Q8N4U5 519 aa34.82■■■■□ 3.16
NKX2-1-205ENST00000546983 CSB-PGBD3P0DP91 1061 aa34.81■■■■□ 3.16
NKX2-1-205ENST00000546983 LARP1Q6PKG0 1096 aaKnown RBP34.81■■■■□ 3.16
NKX2-1-205ENST00000546983 TOM1L2Q6ZVM7 507 aa34.8■■■■□ 3.16
NKX2-1-205ENST00000546983 AXIN2Q9Y2T1 843 aa34.8■■■■□ 3.16
NKX2-1-205ENST00000546983 COL18A1P39060 1754 aa34.79■■■■□ 3.16
NKX2-1-205ENST00000546983 MAP3K19Q56UN5 1328 aa34.79■■■■□ 3.16
NKX2-1-205ENST00000546983 SEPT12Q8IYM1 358 aa34.78■■■■□ 3.16
NKX2-1-205ENST00000546983 CDCA7Q9BWT1 371 aaPredicted RBP34.78■■■■□ 3.16
NKX2-1-205ENST00000546983 FAM98CQ17RN3 349 aaKnown RBP34.77■■■■□ 3.16
NKX2-1-205ENST00000546983 A0A0G2JS52 829 aa34.76■■■■□ 3.16
NKX2-1-205ENST00000546983 MYT1Q01538 1121 aa34.76■■■■□ 3.16
NKX2-1-205ENST00000546983 CARD10Q9BWT7 1032 aa34.76■■■■□ 3.16
NKX2-1-205ENST00000546983 ERBB3P21860 1342 aa34.76■■■■□ 3.15
NKX2-1-205ENST00000546983 LTN1O94822 1766 aa34.73■■■■□ 3.15
NKX2-1-205ENST00000546983 HOXC9P31274 260 aa34.73■■■■□ 3.15
NKX2-1-205ENST00000546983 USP35Q9P2H5 1018 aa34.72■■■■□ 3.15
NKX2-1-205ENST00000546983 FLT4P35916 1363 aa34.72■■■■□ 3.15
NKX2-1-205ENST00000546983 NPC1L1Q9UHC9 1359 aa34.72■■■■□ 3.15
NKX2-1-205ENST00000546983 MORC1Q86VD1 984 aa34.71■■■■□ 3.15
NKX2-1-205ENST00000546983 ANKRD24Q8TF21 1146 aa34.71■■■■□ 3.15
NKX2-1-205ENST00000546983 PER1O15534 1290 aaPredicted RBP34.7■■■■□ 3.15
NKX2-1-205ENST00000546983 SMG6Q86US8 1419 aaKnown RBP34.7■■■■□ 3.15
NKX2-1-205ENST00000546983 RRS1Q15050 365 aaKnown RBP34.69■■■■□ 3.14
NKX2-1-205ENST00000546983 AMER1Q5JTC6 1135 aaPredicted RBP34.68■■■■□ 3.14
NKX2-1-205ENST00000546983 KRT27Q7Z3Y8 459 aa34.68■■■■□ 3.14
NKX2-1-205ENST00000546983 ANKRD26Q9UPS8 1709 aa34.67■■■■□ 3.14
NKX2-1-205ENST00000546983 INSRP06213 1382 aa34.66■■■■□ 3.14
NKX2-1-205ENST00000546983 NLRP2Q9NX02 1062 aa34.66■■■■□ 3.14
NKX2-1-205ENST00000546983 THSD7AQ9UPZ6 1657 aa34.63■■■■□ 3.13
NKX2-1-205ENST00000546983 CCDC125Q86Z20 511 aa34.62■■■■□ 3.13
NKX2-1-205ENST00000546983 FAM208AQ9UK61 1670 aaKnown RBP34.61■■■■□ 3.13
NKX2-1-205ENST00000546983 FBLN1P23142 703 aa34.61■■■■□ 3.13
NKX2-1-205ENST00000546983 PDE3BQ13370 1112 aa34.61■■■■□ 3.13
NKX2-1-205ENST00000546983 POLKQ9UBT6 870 aa34.6■■■■□ 3.13
NKX2-1-205ENST00000546983 EMILIN1Q9Y6C2 1016 aa34.58■■■■□ 3.13
NKX2-1-205ENST00000546983 RGPD5Q99666 1765 aa34.57■■■■□ 3.12
NKX2-1-205ENST00000546983 PPM1GO15355 546 aaPredicted RBP34.57■■■■□ 3.12
NKX2-1-205ENST00000546983 TNNT2P45379 298 aaPredicted RBP34.56■■■■□ 3.12
NKX2-1-205ENST00000546983 LTV1Q96GA3 475 aaPredicted RBP34.56■■■■□ 3.12
NKX2-1-205ENST00000546983 DDB1Q16531 1140 aa34.55■■■■□ 3.12
NKX2-1-205ENST00000546983 IL2RBP14784 551 aa34.54■■■■□ 3.12
NKX2-1-205ENST00000546983 HSP90AB2PQ58FF8 381 aa34.54■■■■□ 3.12
NKX2-1-205ENST00000546983 UPF1Q92900 1129 aaKnown RBP eCLIP34.53■■■■□ 3.12
NKX2-1-205ENST00000546983 EXOC5O00471 708 aa34.52■■■■□ 3.12
NKX2-1-205ENST00000546983 FAM196AQ6ZSG2 479 aa34.52■■■■□ 3.12
NKX2-1-205ENST00000546983 CC2D1BQ5T0F9 858 aaKnown RBP34.51■■■■□ 3.12
NKX2-1-205ENST00000546983 PARP4Q9UKK3 1724 aaKnown RBP34.5■■■■□ 3.11
NKX2-1-205ENST00000546983 DISP2A7MBM2 1401 aa34.5■■■■□ 3.11
NKX2-1-205ENST00000546983 MAP2P11137 1827 aaKnown RBP34.46■■■■□ 3.11
NKX2-1-205ENST00000546983 SF3B2Q13435 895 aaKnown RBP34.46■■■■□ 3.11
NKX2-1-205ENST00000546983 BRWD3Q6RI45 1802 aa34.46■■■■□ 3.11
NKX2-1-205ENST00000546983 PEAK1Q9H792 1746 aa34.45■■■■□ 3.11
NKX2-1-205ENST00000546983 RAPGEF4Q8WZA2 1011 aa34.44■■■■□ 3.1
NKX2-1-205ENST00000546983 NBPF6Q5VWK0 638 aa34.43■■■■□ 3.1
NKX2-1-205ENST00000546983 NBPF4Q96M43 638 aa34.43■■■■□ 3.1
NKX2-1-205ENST00000546983 OVOS2A0A0G2JMS6 1433 aa34.41■■■■□ 3.1
NKX2-1-205ENST00000546983 TNS2Q63HR2 1409 aa34.41■■■■□ 3.1
NKX2-1-205ENST00000546983 PLEKHG2Q9H7P9 1386 aa34.41■■■■□ 3.1
NKX2-1-205ENST00000546983 WNK3Q9BYP7 1800 aa34.4■■■■□ 3.1
NKX2-1-205ENST00000546983 BCL9O00512 1426 aa34.38■■■■□ 3.09
NKX2-1-205ENST00000546983 LRRC37A3O60309 1634 aa34.37■■■■□ 3.09
NKX2-1-205ENST00000546983 TATP17735 454 aaPredicted RBP34.37■■■■□ 3.09
NKX2-1-205ENST00000546983 MTHFSP49914 203 aa34.37■■■■□ 3.09
NKX2-1-205ENST00000546983 EIF4A2Q14240 407 aaKnown RBP34.37■■■■□ 3.09
NKX2-1-205ENST00000546983 NCAPD2Q15021 1401 aa34.34■■■■□ 3.09
NKX2-1-205ENST00000546983 DDX10Q13206 875 aaKnown RBP34.33■■■■□ 3.09
NKX2-1-205ENST00000546983 CFAP53Q96M91 514 aa34.33■■■■□ 3.09
NKX2-1-205ENST00000546983 EYA1Q99502 592 aa34.33■■■■□ 3.09
NKX2-1-205ENST00000546983 ZCRB1Q8TBF4 217 aaKnown RBP34.32■■■■□ 3.08
NKX2-1-205ENST00000546983 IGSF1Q8N6C5 1336 aa34.3■■■■□ 3.08
NKX2-1-205ENST00000546983 MARCH10Q8NA82 808 aaPredicted RBP34.3■■■■□ 3.08
NKX2-1-205ENST00000546983 ZNF316A6NFI3 1004 aaPredicted RBP34.29■■■■□ 3.08
NKX2-1-205ENST00000546983 BAG6P46379 1132 aa34.29■■■■□ 3.08
NKX2-1-205ENST00000546983 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.29■■■■□ 3.08
NKX2-1-205ENST00000546983 USHBP1Q8N6Y0 703 aa34.28■■■■□ 3.08
NKX2-1-205ENST00000546983 RALBP1Q15311 655 aa34.27■■■■□ 3.08
NKX2-1-205ENST00000546983 FAM182BQ5T319 152 aa34.27■■■■□ 3.08
NKX2-1-205ENST00000546983 DIAPH1O60610 1272 aaKnown RBP34.26■■■■□ 3.08
NKX2-1-205ENST00000546983 SPG7Q9UQ90 795 aa34.26■■■■□ 3.08
NKX2-1-205ENST00000546983 IL13P35225 146 aa34.25■■■■□ 3.07
NKX2-1-205ENST00000546983 CNGB1Q14028 1251 aaPredicted RBP34.25■■■■□ 3.07
NKX2-1-205ENST00000546983 PCDH11XQ9BZA7 1347 aa34.25■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms