RNA–Protein interactions for RNA: ENST00000546882.5

RFX4-207, Transcript of regulatory factor X4, humanhuman

TSL 3

Gene RFX4, Length 660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-207ENST00000546882 PRDM11Q9NQV5 511 aa12.94□□□□□ -0.34
RFX4-207ENST00000546882 CIZ1Q9ULV3 898 aaPredicted RBP12.94□□□□□ -0.34
RFX4-207ENST00000546882 ANKARQ7Z5J8 1434 aa12.94□□□□□ -0.34
RFX4-207ENST00000546882 POTEIP0CG38 1075 aa12.93□□□□□ -0.34
RFX4-207ENST00000546882 C1QTNF8P60827 252 aa12.93□□□□□ -0.34
RFX4-207ENST00000546882 RGL3Q3MIN7 710 aa12.93□□□□□ -0.34
RFX4-207ENST00000546882 ACIN1Q9UKV3 1341 aaKnown RBP12.92□□□□□ -0.34
RFX4-207ENST00000546882 CASZ1Q86V15 1759 aa12.92□□□□□ -0.34
RFX4-207ENST00000546882 KIAA0232Q92628 1395 aa12.92□□□□□ -0.34
RFX4-207ENST00000546882 CHD4Q14839 1912 aa12.92□□□□□ -0.34
RFX4-207ENST00000546882 NRKQ7Z2Y5 1582 aa12.91□□□□□ -0.34
RFX4-207ENST00000546882 SAFB2Q14151 953 aaKnown RBP eCLIP12.91□□□□□ -0.34
RFX4-207ENST00000546882 CHRNA2Q15822 529 aa12.91□□□□□ -0.34
RFX4-207ENST00000546882 BARGINQ6ZT62 677 aa12.91□□□□□ -0.34
RFX4-207ENST00000546882 DCBLD2Q96PD2 775 aa12.91□□□□□ -0.34
RFX4-207ENST00000546882 PRAM1Q96QH2 718 aa12.91□□□□□ -0.34
RFX4-207ENST00000546882 PDGFDQ9GZP0 370 aaPredicted RBP12.91□□□□□ -0.34
RFX4-207ENST00000546882 C14orf93Q9H972 538 aaKnown RBP12.91□□□□□ -0.34
RFX4-207ENST00000546882 PRR36Q9H6K5 1346 aa12.9□□□□□ -0.34
RFX4-207ENST00000546882 PDE3BQ13370 1112 aa12.9□□□□□ -0.34
RFX4-207ENST00000546882 STRN4Q9NRL3 753 aa12.9□□□□□ -0.34
RFX4-207ENST00000546882 PCDHB13Q9Y5F0 798 aa12.9□□□□□ -0.34
RFX4-207ENST00000546882 GPRASP1Q5JY77 1395 aa12.9□□□□□ -0.34
RFX4-207ENST00000546882 PTGER2P43116 358 aa12.89□□□□□ -0.35
RFX4-207ENST00000546882 ANO8Q9HCE9 1232 aaPredicted RBP12.89□□□□□ -0.35
RFX4-207ENST00000546882 MYOM1P52179 1685 aa12.89□□□□□ -0.35
RFX4-207ENST00000546882 CFAP70Q5T0N1 1121 aa12.88□□□□□ -0.35
RFX4-207ENST00000546882 USP35Q9P2H5 1018 aa12.88□□□□□ -0.35
RFX4-207ENST00000546882 DHX57Q6P158 1386 aaKnown RBP12.88□□□□□ -0.35
RFX4-207ENST00000546882 RGPD3A6NKT7 1758 aaPredicted RBP12.88□□□□□ -0.35
RFX4-207ENST00000546882 RGPD4Q7Z3J3 1758 aa12.88□□□□□ -0.35
RFX4-207ENST00000546882 PHRF1Q9P1Y6 1649 aaKnown RBP12.88□□□□□ -0.35
RFX4-207ENST00000546882 SSH2Q76I76 1423 aa12.88□□□□□ -0.35
RFX4-207ENST00000546882 SGIP1Q9BQI5 828 aa12.87□□□□□ -0.35
RFX4-207ENST00000546882 DLC1Q96QB1 1528 aa12.87□□□□□ -0.35
RFX4-207ENST00000546882 PEAK1Q9H792 1746 aa12.86□□□□□ -0.35
RFX4-207ENST00000546882 PLSCR1O15162 318 aa12.86□□□□□ -0.35
RFX4-207ENST00000546882 ZC3H6P61129 1189 aaKnown RBP12.86□□□□□ -0.35
RFX4-207ENST00000546882 IFNL1Q8IU54 200 aa12.86□□□□□ -0.35
RFX4-207ENST00000546882 TRPC6Q9Y210 931 aa12.86□□□□□ -0.35
RFX4-207ENST00000546882 SBF2Q86WG5 1849 aa12.85□□□□□ -0.35
RFX4-207ENST00000546882 TULP4Q9NRJ4 1543 aa12.85□□□□□ -0.35
RFX4-207ENST00000546882 ZBTB7AO95365 584 aa12.85□□□□□ -0.35
RFX4-207ENST00000546882 LARP1Q6PKG0 1096 aaKnown RBP12.85□□□□□ -0.35
RFX4-207ENST00000546882 SYT17Q9BSW7 474 aa12.85□□□□□ -0.35
RFX4-207ENST00000546882 HIRIP3Q9BW71 556 aaPredicted RBP12.85□□□□□ -0.35
RFX4-207ENST00000546882 PARP4Q9UKK3 1724 aaKnown RBP12.85□□□□□ -0.35
RFX4-207ENST00000546882 TCP11L2Q8N4U5 519 aa12.84□□□□□ -0.35
RFX4-207ENST00000546882 POGKQ9P215 609 aa12.84□□□□□ -0.35
RFX4-207ENST00000546882 LMO7Q8WWI1 1683 aa12.83□□□□□ -0.35
RFX4-207ENST00000546882 PTF1AQ7RTS3 328 aa12.83□□□□□ -0.36
RFX4-207ENST00000546882 NGDNQ8NEJ9 315 aaKnown RBP12.83□□□□□ -0.36
RFX4-207ENST00000546882 FHDC1Q9C0D6 1143 aaPredicted RBP12.83□□□□□ -0.36
RFX4-207ENST00000546882 CHRM1P11229 460 aaPredicted RBP12.82□□□□□ -0.36
RFX4-207ENST00000546882 EVA1CP58658 441 aa12.82□□□□□ -0.36
RFX4-207ENST00000546882 PPARGC1BQ86YN6 1023 aaKnown RBP12.82□□□□□ -0.36
RFX4-207ENST00000546882 THRAP3Q9Y2W1 955 aaKnown RBP12.82□□□□□ -0.36
RFX4-207ENST00000546882 WASLO00401 505 aaPredicted RBP12.81□□□□□ -0.36
RFX4-207ENST00000546882 MINK1Q8N4C8 1332 aaPredicted RBP12.81□□□□□ -0.36
RFX4-207ENST00000546882 ADGRB1O14514 1584 aa12.81□□□□□ -0.36
RFX4-207ENST00000546882 OVOS2A0A0G2JMS6 1433 aa12.8□□□□□ -0.36
RFX4-207ENST00000546882 OVOS2A0A0J9YW53 1432 aa12.8□□□□□ -0.36
RFX4-207ENST00000546882 OVOS2Q6IE36 1432 aa12.8□□□□□ -0.36
RFX4-207ENST00000546882 C11orf95C9JLR9 678 aaPredicted RBP12.8□□□□□ -0.36
RFX4-207ENST00000546882 NUTM2GQ5VZR2 741 aa12.8□□□□□ -0.36
RFX4-207ENST00000546882 PCDHB8Q9UN66 801 aa12.8□□□□□ -0.36
RFX4-207ENST00000546882 EIF3AQ14152 1382 aaKnown RBP12.8□□□□□ -0.36
RFX4-207ENST00000546882 ATP7BP35670 1465 aa12.79□□□□□ -0.36
RFX4-207ENST00000546882 BCL11BQ9C0K0 894 aaPredicted RBP12.79□□□□□ -0.36
RFX4-207ENST00000546882 BMP2KQ9NSY1 1161 aaPredicted RBP12.79□□□□□ -0.36
RFX4-207ENST00000546882 CPDO75976 1380 aa12.79□□□□□ -0.36
RFX4-207ENST00000546882 GOLGB1Q14789 3259 aaKnown RBP12.79□□□□□ -0.36
RFX4-207ENST00000546882 ATMINO43313 823 aaPredicted RBP12.78□□□□□ -0.36
RFX4-207ENST00000546882 ASTLQ6HA08 431 aaPredicted RBP12.78□□□□□ -0.36
RFX4-207ENST00000546882 TRAK1Q9UPV9 953 aa12.78□□□□□ -0.36
RFX4-207ENST00000546882 COL5A2P05997 1499 aaPredicted RBP12.77□□□□□ -0.37
RFX4-207ENST00000546882 LRRC37A3O60309 1634 aa12.77□□□□□ -0.37
RFX4-207ENST00000546882 ITSN1Q15811 1721 aa12.76□□□□□ -0.37
RFX4-207ENST00000546882 TIE1P35590 1138 aa12.76□□□□□ -0.37
RFX4-207ENST00000546882 SLC15A2Q16348 729 aa12.76□□□□□ -0.37
RFX4-207ENST00000546882 PELP1Q8IZL8 1130 aaKnown RBP12.76□□□□□ -0.37
RFX4-207ENST00000546882 NUDT16Q96DE0 195 aaKnown RBP12.76□□□□□ -0.37
RFX4-207ENST00000546882 MPHOSPH9Q99550 1183 aa12.76□□□□□ -0.37
RFX4-207ENST00000546882 MTFR1LQ9H019 292 aa12.76□□□□□ -0.37
RFX4-207ENST00000546882 USP19O94966 1318 aa12.76□□□□□ -0.37
RFX4-207ENST00000546882 MAP3K5Q99683 1374 aa12.76□□□□□ -0.37
RFX4-207ENST00000546882 BCL9O00512 1426 aa12.75□□□□□ -0.37
RFX4-207ENST00000546882 POLR3AO14802 1390 aaPredicted RBP12.75□□□□□ -0.37
RFX4-207ENST00000546882 GIGYF1O75420 1035 aaPredicted RBP12.75□□□□□ -0.37
RFX4-207ENST00000546882 CRB1P82279 1406 aa12.74□□□□□ -0.37
RFX4-207ENST00000546882 ATN1P54259 1190 aaPredicted RBP12.74□□□□□ -0.37
RFX4-207ENST00000546882 TXNRD1Q16881 649 aa12.74□□□□□ -0.37
RFX4-207ENST00000546882 ZNF467Q7Z7K2 595 aaPredicted RBP12.74□□□□□ -0.37
RFX4-207ENST00000546882 MARCH10Q8NA82 808 aaPredicted RBP12.74□□□□□ -0.37
RFX4-207ENST00000546882 STK32BQ9NY57 414 aa12.74□□□□□ -0.37
RFX4-207ENST00000546882 TTLL13PA6NNM8 815 aa12.73□□□□□ -0.37
RFX4-207ENST00000546882 DDB1Q16531 1140 aa12.73□□□□□ -0.37
RFX4-207ENST00000546882 ARXQ96QS3 562 aa12.73□□□□□ -0.37
RFX4-207ENST00000546882 SHANK3Q9BYB0 1731 aa12.73□□□□□ -0.37
RFX4-207ENST00000546882 ACEP12821 1306 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms