RNA–Protein interactions for RNA: ENST00000546337.1

SCRIB-208, Transcript of scribbled planar cell polarity protein, humanhuman

TSL 3

Gene SCRIB, Length 516 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRIB-208ENST00000546337 LMO7Q8WWI1 1683 aa21.56■■□□□ 1.04
SCRIB-208ENST00000546337 SPATA31A1Q5TZJ5 1347 aa21.55■■□□□ 1.04
SCRIB-208ENST00000546337 SOX12O15370 315 aa21.55■■□□□ 1.04
SCRIB-208ENST00000546337 IP6K1Q92551 441 aa21.55■■□□□ 1.04
SCRIB-208ENST00000546337 STRN4Q9NRL3 753 aa21.55■■□□□ 1.04
SCRIB-208ENST00000546337 BARGINQ6ZT62 677 aa21.54■■□□□ 1.04
SCRIB-208ENST00000546337 AXIN2Q9Y2T1 843 aa21.54■■□□□ 1.04
SCRIB-208ENST00000546337 WDR17Q8IZU2 1322 aa21.54■■□□□ 1.04
SCRIB-208ENST00000546337 COL5A2P05997 1499 aaPredicted RBP21.53■■□□□ 1.04
SCRIB-208ENST00000546337 NRAPQ86VF7 1730 aa21.53■■□□□ 1.04
SCRIB-208ENST00000546337 ZBTB7CA1YPR0 619 aa21.53■■□□□ 1.04
SCRIB-208ENST00000546337 BLMP54132 1417 aaPredicted RBP21.52■■□□□ 1.04
SCRIB-208ENST00000546337 CRB1P82279 1406 aa21.52■■□□□ 1.04
SCRIB-208ENST00000546337 COL18A1P39060 1754 aa21.51■■□□□ 1.03
SCRIB-208ENST00000546337 PER1O15534 1290 aaPredicted RBP21.51■■□□□ 1.03
SCRIB-208ENST00000546337 LARP1Q6PKG0 1096 aaKnown RBP21.51■■□□□ 1.03
SCRIB-208ENST00000546337 TCP11L2Q8N4U5 519 aa21.51■■□□□ 1.03
SCRIB-208ENST00000546337 CARD10Q9BWT7 1032 aa21.51■■□□□ 1.03
SCRIB-208ENST00000546337 RGS12O14924 1447 aa21.51■■□□□ 1.03
SCRIB-208ENST00000546337 GLI3P10071 1580 aa21.51■■□□□ 1.03
SCRIB-208ENST00000546337 MAP3K19Q56UN5 1328 aa21.51■■□□□ 1.03
SCRIB-208ENST00000546337 RTL1A6NKG5 1358 aa21.5■■□□□ 1.03
SCRIB-208ENST00000546337 AMPHP49418 695 aa21.5■■□□□ 1.03
SCRIB-208ENST00000546337 SEPT12Q8IYM1 358 aa21.5■■□□□ 1.03
SCRIB-208ENST00000546337 CDCA7Q9BWT1 371 aaPredicted RBP21.5■■□□□ 1.03
SCRIB-208ENST00000546337 NPC1L1Q9UHC9 1359 aa21.48■■□□□ 1.03
SCRIB-208ENST00000546337 TOM1L2Q6ZVM7 507 aa21.48■■□□□ 1.03
SCRIB-208ENST00000546337 ERBB3P21860 1342 aa21.48■■□□□ 1.03
SCRIB-208ENST00000546337 CSB-PGBD3P0DP91 1061 aa21.47■■□□□ 1.03
SCRIB-208ENST00000546337 HOXC9P31274 260 aa21.47■■□□□ 1.03
SCRIB-208ENST00000546337 FAM98CQ17RN3 349 aaKnown RBP21.47■■□□□ 1.03
SCRIB-208ENST00000546337 AMER1Q5JTC6 1135 aaPredicted RBP21.47■■□□□ 1.03
SCRIB-208ENST00000546337 KIF20BQ96Q89 1820 aa21.45■■□□□ 1.03
SCRIB-208ENST00000546337 MORC1Q86VD1 984 aa21.45■■□□□ 1.02
SCRIB-208ENST00000546337 ANKRD24Q8TF21 1146 aa21.45■■□□□ 1.02
SCRIB-208ENST00000546337 RRS1Q15050 365 aaKnown RBP21.43■■□□□ 1.02
SCRIB-208ENST00000546337 INSRP06213 1382 aa21.43■■□□□ 1.02
SCRIB-208ENST00000546337 FLT4P35916 1363 aa21.43■■□□□ 1.02
SCRIB-208ENST00000546337 FBLN1P23142 703 aa21.42■■□□□ 1.02
SCRIB-208ENST00000546337 KRT27Q7Z3Y8 459 aa21.42■■□□□ 1.02
SCRIB-208ENST00000546337 POLKQ9UBT6 870 aa21.42■■□□□ 1.02
SCRIB-208ENST00000546337 CCDC125Q86Z20 511 aa21.41■■□□□ 1.02
SCRIB-208ENST00000546337 USP35Q9P2H5 1018 aa21.41■■□□□ 1.02
SCRIB-208ENST00000546337 A0A0G2JS52 829 aa21.4■■□□□ 1.02
SCRIB-208ENST00000546337 MYT1Q01538 1121 aa21.4■■□□□ 1.02
SCRIB-208ENST00000546337 NLRP2Q9NX02 1062 aa21.4■■□□□ 1.02
SCRIB-208ENST00000546337 LTN1O94822 1766 aa21.39■■□□□ 1.01
SCRIB-208ENST00000546337 SMG6Q86US8 1419 aaKnown RBP21.38■■□□□ 1.01
SCRIB-208ENST00000546337 PDE3BQ13370 1112 aa21.37■■□□□ 1.01
SCRIB-208ENST00000546337 EMILIN1Q9Y6C2 1016 aa21.37■■□□□ 1.01
SCRIB-208ENST00000546337 ANKRD26Q9UPS8 1709 aa21.36■■□□□ 1.01
SCRIB-208ENST00000546337 HSP90AB2PQ58FF8 381 aa21.36■■□□□ 1.01
SCRIB-208ENST00000546337 UPF1Q92900 1129 aaKnown RBP eCLIP21.36■■□□□ 1.01
SCRIB-208ENST00000546337 THSD7AQ9UPZ6 1657 aa21.36■■□□□ 1.01
SCRIB-208ENST00000546337 EXOC5O00471 708 aa21.34■■□□□ 1.01
SCRIB-208ENST00000546337 IL2RBP14784 551 aa21.34■■□□□ 1.01
SCRIB-208ENST00000546337 DDB1Q16531 1140 aa21.34■■□□□ 1.01
SCRIB-208ENST00000546337 DISP2A7MBM2 1401 aa21.33■■□□□ 1.01
SCRIB-208ENST00000546337 FAM196AQ6ZSG2 479 aa21.33■■□□□ 1.01
SCRIB-208ENST00000546337 LTV1Q96GA3 475 aaPredicted RBP21.33■■□□□ 1.01
SCRIB-208ENST00000546337 RGPD5Q99666 1765 aa21.33■■□□□ 1
SCRIB-208ENST00000546337 PPM1GO15355 546 aaPredicted RBP21.32■■□□□ 1
SCRIB-208ENST00000546337 TNNT2P45379 298 aaPredicted RBP21.32■■□□□ 1
SCRIB-208ENST00000546337 FAM208AQ9UK61 1670 aaKnown RBP21.31■■□□□ 1
SCRIB-208ENST00000546337 CC2D1BQ5T0F9 858 aaKnown RBP21.3■■□□□ 1
SCRIB-208ENST00000546337 NBPF6Q5VWK0 638 aa21.3■■□□□ 1
SCRIB-208ENST00000546337 NBPF4Q96M43 638 aa21.3■■□□□ 1
SCRIB-208ENST00000546337 MAP2P11137 1827 aaKnown RBP21.29■■□□□ 1
SCRIB-208ENST00000546337 PARP4Q9UKK3 1724 aaKnown RBP21.28■■□□□ 1
SCRIB-208ENST00000546337 BCL9O00512 1426 aa21.28■■□□□ 1
SCRIB-208ENST00000546337 PLEKHG2Q9H7P9 1386 aa21.27■■□□□ 1
SCRIB-208ENST00000546337 RAPGEF4Q8WZA2 1011 aa21.26■□□□□ 0.99
SCRIB-208ENST00000546337 BRWD3Q6RI45 1802 aa21.26■□□□□ 0.99
SCRIB-208ENST00000546337 PEAK1Q9H792 1746 aa21.26■□□□□ 0.99
SCRIB-208ENST00000546337 MTHFSP49914 203 aa21.25■□□□□ 0.99
SCRIB-208ENST00000546337 EIF4A2Q14240 407 aaKnown RBP21.25■□□□□ 0.99
SCRIB-208ENST00000546337 NCAPD2Q15021 1401 aa21.25■□□□□ 0.99
SCRIB-208ENST00000546337 TATP17735 454 aaPredicted RBP21.24■□□□□ 0.99
SCRIB-208ENST00000546337 SF3B2Q13435 895 aaKnown RBP21.24■□□□□ 0.99
SCRIB-208ENST00000546337 EYA1Q99502 592 aa21.24■□□□□ 0.99
SCRIB-208ENST00000546337 OVOS2A0A0G2JMS6 1433 aa21.23■□□□□ 0.99
SCRIB-208ENST00000546337 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.23■□□□□ 0.99
SCRIB-208ENST00000546337 TNS2Q63HR2 1409 aa21.22■□□□□ 0.99
SCRIB-208ENST00000546337 DDX10Q13206 875 aaKnown RBP21.22■□□□□ 0.99
SCRIB-208ENST00000546337 MARCH10Q8NA82 808 aaPredicted RBP21.22■□□□□ 0.99
SCRIB-208ENST00000546337 ZCRB1Q8TBF4 217 aaKnown RBP21.22■□□□□ 0.99
SCRIB-208ENST00000546337 ZNF316A6NFI3 1004 aaPredicted RBP21.21■□□□□ 0.99
SCRIB-208ENST00000546337 IGSF1Q8N6C5 1336 aa21.21■□□□□ 0.99
SCRIB-208ENST00000546337 IL13P35225 146 aa21.19■□□□□ 0.98
SCRIB-208ENST00000546337 RALBP1Q15311 655 aa21.19■□□□□ 0.98
SCRIB-208ENST00000546337 WNK3Q9BYP7 1800 aa21.18■□□□□ 0.98
SCRIB-208ENST00000546337 CFAP53Q96M91 514 aa21.18■□□□□ 0.98
SCRIB-208ENST00000546337 LRRC37A3O60309 1634 aa21.18■□□□□ 0.98
SCRIB-208ENST00000546337 DIAPH1O60610 1272 aaKnown RBP21.17■□□□□ 0.98
SCRIB-208ENST00000546337 FAM182BQ5T319 152 aa21.17■□□□□ 0.98
SCRIB-208ENST00000546337 USHBP1Q8N6Y0 703 aa21.17■□□□□ 0.98
SCRIB-208ENST00000546337 PARD3Q8TEW0 1356 aa21.16■□□□□ 0.98
SCRIB-208ENST00000546337 PPP2R1AP30153 589 aa21.16■□□□□ 0.98
SCRIB-208ENST00000546337 BAG6P46379 1132 aa21.16■□□□□ 0.98
SCRIB-208ENST00000546337 BCL11BQ9C0K0 894 aaPredicted RBP21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms