RNA–Protein interactions for RNA: ENST00000541025.2

TTR-203, Transcript of transthyretin, humanhuman

TSL 2

Gene TTR, Length 956 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTR-203ENST00000541025 PCMTD1Q96MG8 357 aaPredicted RBP11.36□□□□□ -0.59
TTR-203ENST00000541025 WDR62O43379 1518 aa11.35□□□□□ -0.59
TTR-203ENST00000541025 SUPT5HO00267 1087 aaKnown RBP11.35□□□□□ -0.59
TTR-203ENST00000541025 SNRPBP14678 240 aaKnown RBP11.35□□□□□ -0.59
TTR-203ENST00000541025 GRM5P41594 1212 aa11.35□□□□□ -0.59
TTR-203ENST00000541025 TREML4Q6UXN2 200 aa11.35□□□□□ -0.59
TTR-203ENST00000541025 TRMT44Q8IYL2 757 aaKnown RBP11.35□□□□□ -0.59
TTR-203ENST00000541025 KLF16Q9BXK1 252 aaPredicted RBP11.35□□□□□ -0.59
TTR-203ENST00000541025 MRC2Q9UBG0 1479 aa11.35□□□□□ -0.59
TTR-203ENST00000541025 WDR4P57081 412 aaKnown RBP11.34□□□□□ -0.59
TTR-203ENST00000541025 TRIM46Q7Z4K8 759 aa11.34□□□□□ -0.59
TTR-203ENST00000541025 FKBPLQ9UIM3 349 aa11.34□□□□□ -0.59
TTR-203ENST00000541025 MAP4K5Q9Y4K4 846 aa11.34□□□□□ -0.59
TTR-203ENST00000541025 ZC3H4Q9UPT8 1303 aaKnown RBP11.34□□□□□ -0.59
TTR-203ENST00000541025 TIMP2P16035 220 aa11.33□□□□□ -0.6
TTR-203ENST00000541025 NR6A1Q15406 480 aa11.33□□□□□ -0.6
TTR-203ENST00000541025 IL27Q8NEV9 243 aa11.33□□□□□ -0.6
TTR-203ENST00000541025 MAGEB6P1A0A0J9YX57 407 aa11.32□□□□□ -0.6
TTR-203ENST00000541025 RFC5P40937 340 aa11.32□□□□□ -0.6
TTR-203ENST00000541025 PNMA1Q8ND90 353 aa11.31□□□□□ -0.6
TTR-203ENST00000541025 URB2Q14146 1524 aaKnown RBP11.3□□□□□ -0.6
TTR-203ENST00000541025 BMP1P13497 986 aa11.3□□□□□ -0.6
TTR-203ENST00000541025 TMEM259Q4ZIN3 620 aa11.3□□□□□ -0.6
TTR-203ENST00000541025 VASH1Q7L8A9 365 aaPredicted RBP11.3□□□□□ -0.6
TTR-203ENST00000541025 ARHGAP9Q9BRR9 750 aa11.3□□□□□ -0.6
TTR-203ENST00000541025 GPSM3Q9Y4H4 160 aa11.3□□□□□ -0.6
TTR-203ENST00000541025 BRPF1P55201 1214 aaPredicted RBP11.29□□□□□ -0.6
TTR-203ENST00000541025 PTK2Q05397 1052 aa11.29□□□□□ -0.6
TTR-203ENST00000541025 ERFEQ4G0M1 354 aa11.29□□□□□ -0.6
TTR-203ENST00000541025 LCE2AQ5TA79 106 aaPredicted RBP11.29□□□□□ -0.6
TTR-203ENST00000541025 MRPL14Q6P1L8 145 aaKnown RBP11.29□□□□□ -0.6
TTR-203ENST00000541025 WFS1O76024 890 aa11.28□□□□□ -0.6
TTR-203ENST00000541025 ZIC2O95409 532 aaPredicted RBP11.28□□□□□ -0.6
TTR-203ENST00000541025 NR3C2P08235 984 aa11.28□□□□□ -0.6
TTR-203ENST00000541025 USP17L8P0C7I0 530 aa11.28□□□□□ -0.6
TTR-203ENST00000541025 SCARF1Q14162 830 aa11.28□□□□□ -0.6
TTR-203ENST00000541025 ZFP42Q96MM3 310 aa11.28□□□□□ -0.6
TTR-203ENST00000541025 CARD14Q9BXL6 1004 aa11.28□□□□□ -0.6
TTR-203ENST00000541025 CDV3Q9UKY7 258 aaKnown RBP11.28□□□□□ -0.6
TTR-203ENST00000541025 ZBTB33Q86T24 672 aa11.27□□□□□ -0.61
TTR-203ENST00000541025 TERTO14746 1132 aaKnown RBP11.26□□□□□ -0.61
TTR-203ENST00000541025 ITPKCQ96DU7 683 aa11.26□□□□□ -0.61
TTR-203ENST00000541025 NFX1Q12986 1120 aaKnown RBP11.25□□□□□ -0.61
TTR-203ENST00000541025 ZFAND3Q9H8U3 227 aa11.25□□□□□ -0.61
TTR-203ENST00000541025 EMILIN1Q9Y6C2 1016 aa11.25□□□□□ -0.61
TTR-203ENST00000541025 FSHRP23945 695 aa11.24□□□□□ -0.61
TTR-203ENST00000541025 CCDC116Q8IYX3 515 aa11.24□□□□□ -0.61
TTR-203ENST00000541025 EPS8L1Q8TE68 723 aa11.23□□□□□ -0.61
TTR-203ENST00000541025 HMX1Q9NP08 348 aaPredicted RBP11.23□□□□□ -0.61
TTR-203ENST00000541025 DNMBPQ6XZF7 1577 aa11.22□□□□□ -0.61
TTR-203ENST00000541025 TOPBP1Q92547 1522 aa11.22□□□□□ -0.61
TTR-203ENST00000541025 SLC10A4Q96EP9 437 aa11.22□□□□□ -0.61
TTR-203ENST00000541025 UPP2O95045 317 aa11.21□□□□□ -0.61
TTR-203ENST00000541025 PURBQ96QR8 312 aaKnown RBP11.21□□□□□ -0.61
TTR-203ENST00000541025 KCTD15Q96SI1 283 aaPredicted RBP11.21□□□□□ -0.61
TTR-203ENST00000541025 NXF1Q9UBU9 619 aaKnown RBP11.21□□□□□ -0.61
TTR-203ENST00000541025 NPAS3Q8IXF0 933 aa11.2□□□□□ -0.62
TTR-203ENST00000541025 ADAM32Q8TC27 787 aa11.2□□□□□ -0.62
TTR-203ENST00000541025 OCSTAMPQ9BR26 566 aa11.2□□□□□ -0.62
TTR-203ENST00000541025 DHX9Q08211 1270 aaKnown RBP11.19□□□□□ -0.62
TTR-203ENST00000541025 SLC16A10Q8TF71 515 aa11.19□□□□□ -0.62
TTR-203ENST00000541025 PGPEP1Q9NXJ5 209 aa11.19□□□□□ -0.62
TTR-203ENST00000541025 PPP1R26Q5T8A7 1209 aaPredicted RBP11.18□□□□□ -0.62
TTR-203ENST00000541025 MEIOBQ8N635 442 aa11.18□□□□□ -0.62
TTR-203ENST00000541025 BANK1Q8NDB2 785 aa11.17□□□□□ -0.62
TTR-203ENST00000541025 TSEN34Q9BSV6 310 aaKnown RBP11.17□□□□□ -0.62
TTR-203ENST00000541025 TRIM34Q9BYJ4 488 aa11.17□□□□□ -0.62
TTR-203ENST00000541025 ABCC8Q09428 1581 aa11.16□□□□□ -0.62
TTR-203ENST00000541025 CUX1P39880 1505 aa11.15□□□□□ -0.62
TTR-203ENST00000541025 BMP2P12643 396 aa11.15□□□□□ -0.62
TTR-203ENST00000541025 NBPF20Q3BBV1 942 aa11.15□□□□□ -0.62
TTR-203ENST00000541025 C6orf118Q5T5N4 469 aa11.15□□□□□ -0.62
TTR-203ENST00000541025 LINC00528Q8N1L1 170 aa11.15□□□□□ -0.62
TTR-203ENST00000541025 TARBP1Q13395 1621 aaKnown RBP11.15□□□□□ -0.62
TTR-203ENST00000541025 WIPF1O43516 503 aa11.14□□□□□ -0.63
TTR-203ENST00000541025 DZIP3Q86Y13 1208 aaKnown RBP11.14□□□□□ -0.63
TTR-203ENST00000541025 Q6ZVU0 165 aa11.13□□□□□ -0.63
TTR-203ENST00000541025 MAN1A2O60476 641 aa11.12□□□□□ -0.63
TTR-203ENST00000541025 INTS6LQ5JSJ4 861 aaKnown RBP11.12□□□□□ -0.63
TTR-203ENST00000541025 GJD4Q96KN9 370 aaPredicted RBP11.12□□□□□ -0.63
TTR-203ENST00000541025 ZNF608Q9ULD9 1512 aaPredicted RBP11.12□□□□□ -0.63
TTR-203ENST00000541025 POLA1P09884 1462 aaPredicted RBP11.12□□□□□ -0.63
TTR-203ENST00000541025 EIF4G3O43432 1585 aaKnown RBP11.11□□□□□ -0.63
TTR-203ENST00000541025 WDR97A6NE52 1622 aa11.11□□□□□ -0.63
TTR-203ENST00000541025 SOCS7O14512 581 aa11.11□□□□□ -0.63
TTR-203ENST00000541025 IFT140Q96RY7 1462 aa11.11□□□□□ -0.63
TTR-203ENST00000541025 ZBBXA8MT70 800 aa11.1□□□□□ -0.63
TTR-203ENST00000541025 SOS2Q07890 1332 aaPredicted RBP11.09□□□□□ -0.63
TTR-203ENST00000541025 BIVM-ERCC5R4GMW8 1640 aa11.09□□□□□ -0.63
TTR-203ENST00000541025 FGD5Q6ZNL6 1462 aa11.09□□□□□ -0.63
TTR-203ENST00000541025 H3BM21 787 aa11.09□□□□□ -0.63
TTR-203ENST00000541025 IRF7Q92985 503 aa11.09□□□□□ -0.63
TTR-203ENST00000541025 TRIM52Q96A61 297 aa11.09□□□□□ -0.63
TTR-203ENST00000541025 SYNJ1O43426 1573 aa11.08□□□□□ -0.64
TTR-203ENST00000541025 RAD54L2Q9Y4B4 1467 aa11.08□□□□□ -0.64
TTR-203ENST00000541025 ESPNB1AK53 854 aa11.08□□□□□ -0.64
TTR-203ENST00000541025 INSM1Q01101 510 aaPredicted RBP11.08□□□□□ -0.64
TTR-203ENST00000541025 CBLBQ13191 982 aa11.08□□□□□ -0.64
TTR-203ENST00000541025 LCE2CQ5TA81 110 aa11.08□□□□□ -0.64
TTR-203ENST00000541025 SEPT12Q8IYM1 358 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms