RNA–Protein interactions for RNA: ENST00000539018.5

TUBD1-206, Transcript of tubulin delta 1, humanhuman

TSL 2 BASIC

Gene TUBD1, Length 1,027 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-206ENST00000539018 TRAK2O60296 914 aa12.44□□□□□ -0.42
TUBD1-206ENST00000539018 RGS20O76081 388 aa12.44□□□□□ -0.42
TUBD1-206ENST00000539018 ZBTB33Q86T24 672 aa12.44□□□□□ -0.42
TUBD1-206ENST00000539018 CARD14Q9BXL6 1004 aa12.44□□□□□ -0.42
TUBD1-206ENST00000539018 FGD5Q6ZNL6 1462 aa12.44□□□□□ -0.42
TUBD1-206ENST00000539018 TOPBP1Q92547 1522 aa12.43□□□□□ -0.42
TUBD1-206ENST00000539018 RC3H1Q5TC82 1133 aaKnown RBP12.43□□□□□ -0.42
TUBD1-206ENST00000539018 OCSTAMPQ9BR26 566 aa12.43□□□□□ -0.42
TUBD1-206ENST00000539018 TNIKQ9UKE5 1360 aa12.43□□□□□ -0.42
TUBD1-206ENST00000539018 RUSC2Q8N2Y8 1516 aa12.42□□□□□ -0.42
TUBD1-206ENST00000539018 C4orf48Q5BLP8 95 aa12.42□□□□□ -0.42
TUBD1-206ENST00000539018 EHBP1Q8NDI1 1231 aa12.42□□□□□ -0.42
TUBD1-206ENST00000539018 ADAM32Q8TC27 787 aa12.42□□□□□ -0.42
TUBD1-206ENST00000539018 VARSP26640 1264 aaKnown RBP12.41□□□□□ -0.42
TUBD1-206ENST00000539018 WDR97A6NE52 1622 aa12.4□□□□□ -0.42
TUBD1-206ENST00000539018 CUX2O14529 1486 aa12.4□□□□□ -0.43
TUBD1-206ENST00000539018 WNT7AO00755 349 aa12.39□□□□□ -0.43
TUBD1-206ENST00000539018 EIF4G2P78344 907 aaKnown RBP eCLIP12.39□□□□□ -0.43
TUBD1-206ENST00000539018 ERFEQ4G0M1 354 aa12.39□□□□□ -0.43
TUBD1-206ENST00000539018 FAM174AQ8TBP5 190 aa12.39□□□□□ -0.43
TUBD1-206ENST00000539018 C1QTNF2Q9BXJ5 285 aa12.39□□□□□ -0.43
TUBD1-206ENST00000539018 POM121CA8CG34 1229 aa12.37□□□□□ -0.43
TUBD1-206ENST00000539018 SOX11P35716 441 aa12.37□□□□□ -0.43
TUBD1-206ENST00000539018 FOXC1Q12948 553 aa12.37□□□□□ -0.43
TUBD1-206ENST00000539018 ZNF592Q92610 1267 aa12.37□□□□□ -0.43
TUBD1-206ENST00000539018 CUL7Q14999 1698 aa12.37□□□□□ -0.43
TUBD1-206ENST00000539018 ABCA10Q8WWZ4 1543 aa12.37□□□□□ -0.43
TUBD1-206ENST00000539018 POLA1P09884 1462 aaPredicted RBP12.36□□□□□ -0.43
TUBD1-206ENST00000539018 DZIP3Q86Y13 1208 aaKnown RBP12.36□□□□□ -0.43
TUBD1-206ENST00000539018 SLC10A4Q96EP9 437 aa12.36□□□□□ -0.43
TUBD1-206ENST00000539018 MRGPRX2Q96LB1 330 aa12.36□□□□□ -0.43
TUBD1-206ENST00000539018 PCDHB9Q9Y5E1 797 aa12.36□□□□□ -0.43
TUBD1-206ENST00000539018 URB2Q14146 1524 aaKnown RBP12.36□□□□□ -0.43
TUBD1-206ENST00000539018 CEP162Q5TB80 1403 aa12.36□□□□□ -0.43
TUBD1-206ENST00000539018 PRXQ9BXM0 1461 aa12.35□□□□□ -0.43
TUBD1-206ENST00000539018 TRMT44Q8IYL2 757 aaKnown RBP12.35□□□□□ -0.43
TUBD1-206ENST00000539018 PKD2L1Q9P0L9 805 aa12.35□□□□□ -0.43
TUBD1-206ENST00000539018 ZNF777Q9ULD5 760 aaPredicted RBP12.35□□□□□ -0.43
TUBD1-206ENST00000539018 MRC2Q9UBG0 1479 aa12.34□□□□□ -0.43
TUBD1-206ENST00000539018 MCCD1P59942 119 aaPredicted RBP12.34□□□□□ -0.43
TUBD1-206ENST00000539018 SEMA3FQ13275 785 aa12.33□□□□□ -0.44
TUBD1-206ENST00000539018 SIAH2O43255 324 aa12.32□□□□□ -0.44
TUBD1-206ENST00000539018 GDF9O60383 454 aa12.32□□□□□ -0.44
TUBD1-206ENST00000539018 CDV3Q9UKY7 258 aaKnown RBP12.32□□□□□ -0.44
TUBD1-206ENST00000539018 ABCA5Q8WWZ7 1642 aa12.3□□□□□ -0.44
TUBD1-206ENST00000539018 RAPGEF2Q9Y4G8 1499 aa12.3□□□□□ -0.44
TUBD1-206ENST00000539018 ARID5BQ14865 1188 aa12.3□□□□□ -0.44
TUBD1-206ENST00000539018 GLMNQ92990 594 aa12.3□□□□□ -0.44
TUBD1-206ENST00000539018 ALG2Q9H553 416 aa12.3□□□□□ -0.44
TUBD1-206ENST00000539018 MAP4K5Q9Y4K4 846 aa12.3□□□□□ -0.44
TUBD1-206ENST00000539018 TLL2Q9Y6L7 1015 aa12.3□□□□□ -0.44
TUBD1-206ENST00000539018 WDR62O43379 1518 aa12.29□□□□□ -0.44
TUBD1-206ENST00000539018 TNFRSF10AO00220 468 aa12.29□□□□□ -0.44
TUBD1-206ENST00000539018 NBPF20Q3BBV1 942 aa12.29□□□□□ -0.44
TUBD1-206ENST00000539018 HDGFL1Q5TGJ6 251 aa12.29□□□□□ -0.44
TUBD1-206ENST00000539018 VASH1Q7L8A9 365 aaPredicted RBP12.29□□□□□ -0.44
TUBD1-206ENST00000539018 MPNDQ8N594 471 aa12.29□□□□□ -0.44
TUBD1-206ENST00000539018 CALR3Q96L12 384 aaKnown RBP12.29□□□□□ -0.44
TUBD1-206ENST00000539018 ARID3CA6NKF2 412 aa12.28□□□□□ -0.44
TUBD1-206ENST00000539018 PRR20EP86478 221 aa12.28□□□□□ -0.44
TUBD1-206ENST00000539018 PRR20CP86479 221 aa12.28□□□□□ -0.44
TUBD1-206ENST00000539018 PRR20DP86480 221 aa12.28□□□□□ -0.44
TUBD1-206ENST00000539018 PRR20BP86481 221 aa12.28□□□□□ -0.44
TUBD1-206ENST00000539018 PRR20AP86496 221 aa12.28□□□□□ -0.44
TUBD1-206ENST00000539018 TRIM67Q6ZTA4 783 aa12.28□□□□□ -0.44
TUBD1-206ENST00000539018 ADAMTS19Q8TE59 1207 aa12.28□□□□□ -0.44
TUBD1-206ENST00000539018 CDK15Q96Q40 435 aa12.28□□□□□ -0.44
TUBD1-206ENST00000539018 CYP4X1Q8N118 509 aa12.27□□□□□ -0.45
TUBD1-206ENST00000539018 SNIP1Q8TAD8 396 aaKnown RBP12.27□□□□□ -0.45
TUBD1-206ENST00000539018 TARBP1Q13395 1621 aaKnown RBP12.26□□□□□ -0.45
TUBD1-206ENST00000539018 TTC24A2A3L6 582 aaPredicted RBP12.26□□□□□ -0.45
TUBD1-206ENST00000539018 CEP126Q9P2H0 1117 aa12.26□□□□□ -0.45
TUBD1-206ENST00000539018 ERCC6Q03468 1493 aa12.26□□□□□ -0.45
TUBD1-206ENST00000539018 PBRM1Q86U86 1689 aa12.26□□□□□ -0.45
TUBD1-206ENST00000539018 CTTNBP2Q8WZ74 1663 aa12.26□□□□□ -0.45
TUBD1-206ENST00000539018 ALDH1A1P00352 501 aa12.25□□□□□ -0.45
TUBD1-206ENST00000539018 TRIM26Q12899 539 aaPredicted RBP12.25□□□□□ -0.45
TUBD1-206ENST00000539018 KCTD15Q96SI1 283 aaPredicted RBP12.25□□□□□ -0.45
TUBD1-206ENST00000539018 CLIP1P30622 1438 aa12.25□□□□□ -0.45
TUBD1-206ENST00000539018 ADH1CP00326 375 aa12.24□□□□□ -0.45
TUBD1-206ENST00000539018 PDZRN3Q9UPQ7 1066 aa12.24□□□□□ -0.45
TUBD1-206ENST00000539018 RAD54L2Q9Y4B4 1467 aa12.24□□□□□ -0.45
TUBD1-206ENST00000539018 THOC2Q8NI27 1593 aaKnown RBP12.23□□□□□ -0.45
TUBD1-206ENST00000539018 TOR4AQ9NXH8 423 aa12.23□□□□□ -0.45
TUBD1-206ENST00000539018 GIGYF1O75420 1035 aaPredicted RBP12.22□□□□□ -0.45
TUBD1-206ENST00000539018 FSHRP23945 695 aa12.22□□□□□ -0.45
TUBD1-206ENST00000539018 SLFNL1Q499Z3 407 aa12.22□□□□□ -0.45
TUBD1-206ENST00000539018 WASF2Q9Y6W5 498 aa12.22□□□□□ -0.45
TUBD1-206ENST00000539018 IFT140Q96RY7 1462 aa12.21□□□□□ -0.45
TUBD1-206ENST00000539018 IGF1RP08069 1367 aa12.21□□□□□ -0.45
TUBD1-206ENST00000539018 CARMIL1Q5VZK9 1371 aa12.21□□□□□ -0.45
TUBD1-206ENST00000539018 ESPNB1AK53 854 aa12.21□□□□□ -0.45
TUBD1-206ENST00000539018 GRM5P41594 1212 aa12.21□□□□□ -0.45
TUBD1-206ENST00000539018 SEPT12Q8IYM1 358 aa12.21□□□□□ -0.45
TUBD1-206ENST00000539018 GAPVD1Q14C86 1478 aa12.21□□□□□ -0.46
TUBD1-206ENST00000539018 NR5A1Q13285 461 aa12.2□□□□□ -0.46
TUBD1-206ENST00000539018 INTS6LQ5JSJ4 861 aaKnown RBP12.2□□□□□ -0.46
TUBD1-206ENST00000539018 RNF20Q5VTR2 975 aa12.2□□□□□ -0.46
TUBD1-206ENST00000539018 RNF135Q8IUD6 432 aa12.2□□□□□ -0.46
TUBD1-206ENST00000539018 J3QL48 77 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms