RNA–Protein interactions for RNA: ENST00000538987.1

LPCAT3-208, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 3

Gene LPCAT3, Length 527 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-208ENST00000538987 COL22A1Q8NFW1 1626 aaPredicted RBP11.53□□□□□ -0.56
LPCAT3-208ENST00000538987 SHPRHQ149N8 1683 aa11.52□□□□□ -0.56
LPCAT3-208ENST00000538987 ANKRD26Q9UPS8 1709 aa11.52□□□□□ -0.56
LPCAT3-208ENST00000538987 ANKRD24Q8TF21 1146 aa11.52□□□□□ -0.57
LPCAT3-208ENST00000538987 CCDC9Q9Y3X0 531 aaKnown RBP11.52□□□□□ -0.57
LPCAT3-208ENST00000538987 KIF24Q5T7B8 1368 aa11.52□□□□□ -0.57
LPCAT3-208ENST00000538987 NFAT5O94916 1531 aa11.51□□□□□ -0.57
LPCAT3-208ENST00000538987 PHRF1Q9P1Y6 1649 aaKnown RBP11.51□□□□□ -0.57
LPCAT3-208ENST00000538987 WDR43Q15061 677 aaKnown RBP eCLIP11.51□□□□□ -0.57
LPCAT3-208ENST00000538987 CCDC184Q52MB2 194 aa11.51□□□□□ -0.57
LPCAT3-208ENST00000538987 TOM1L2Q6ZVM7 507 aa11.51□□□□□ -0.57
LPCAT3-208ENST00000538987 NLRP2Q9NX02 1062 aa11.51□□□□□ -0.57
LPCAT3-208ENST00000538987 RTL1A6NKG5 1358 aa11.51□□□□□ -0.57
LPCAT3-208ENST00000538987 USP54Q70EL1 1684 aa11.5□□□□□ -0.57
LPCAT3-208ENST00000538987 CCER2I3L3R5 266 aa11.5□□□□□ -0.57
LPCAT3-208ENST00000538987 EIF4A2Q14240 407 aaKnown RBP11.5□□□□□ -0.57
LPCAT3-208ENST00000538987 USP21Q9UK80 565 aa11.5□□□□□ -0.57
LPCAT3-208ENST00000538987 INSRP06213 1382 aa11.5□□□□□ -0.57
LPCAT3-208ENST00000538987 SMG6Q86US8 1419 aaKnown RBP11.5□□□□□ -0.57
LPCAT3-208ENST00000538987 MARF1Q9Y4F3 1742 aaKnown RBP11.49□□□□□ -0.57
LPCAT3-208ENST00000538987 U2AF1L5P0DN76 240 aaPredicted RBP11.49□□□□□ -0.57
LPCAT3-208ENST00000538987 U2AF1Q01081 240 aaKnown RBP eCLIP11.49□□□□□ -0.57
LPCAT3-208ENST00000538987 USP35Q9P2H5 1018 aa11.49□□□□□ -0.57
LPCAT3-208ENST00000538987 BLMP54132 1417 aaPredicted RBP11.49□□□□□ -0.57
LPCAT3-208ENST00000538987 LRP6O75581 1613 aa11.49□□□□□ -0.57
LPCAT3-208ENST00000538987 IL13P35225 146 aa11.48□□□□□ -0.57
LPCAT3-208ENST00000538987 LARP1Q6PKG0 1096 aaKnown RBP11.48□□□□□ -0.57
LPCAT3-208ENST00000538987 UNC5CLQ8IV45 518 aa11.48□□□□□ -0.57
LPCAT3-208ENST00000538987 FAM9BQ8IZU0 186 aa11.48□□□□□ -0.57
LPCAT3-208ENST00000538987 PHF23Q9BUL5 403 aaPredicted RBP11.48□□□□□ -0.57
LPCAT3-208ENST00000538987 AFF2P51816 1311 aa11.48□□□□□ -0.57
LPCAT3-208ENST00000538987 MAP2P11137 1827 aaKnown RBP11.47□□□□□ -0.57
LPCAT3-208ENST00000538987 CDK12Q9NYV4 1490 aaPredicted RBP11.47□□□□□ -0.57
LPCAT3-208ENST00000538987 ERBB3P21860 1342 aa11.47□□□□□ -0.57
LPCAT3-208ENST00000538987 FNBP4Q8N3X1 1017 aaPredicted RBP11.47□□□□□ -0.57
LPCAT3-208ENST00000538987 ABCA3Q99758 1704 aa11.46□□□□□ -0.57
LPCAT3-208ENST00000538987 CRYBG1Q9Y4K1 1723 aa11.46□□□□□ -0.57
LPCAT3-208ENST00000538987 WDR17Q8IZU2 1322 aa11.46□□□□□ -0.57
LPCAT3-208ENST00000538987 HMOX1P09601 288 aa11.46□□□□□ -0.57
LPCAT3-208ENST00000538987 NBPF6Q5VWK0 638 aa11.46□□□□□ -0.57
LPCAT3-208ENST00000538987 USHBP1Q8N6Y0 703 aa11.46□□□□□ -0.57
LPCAT3-208ENST00000538987 NBPF4Q96M43 638 aa11.46□□□□□ -0.57
LPCAT3-208ENST00000538987 EYA1Q99502 592 aa11.46□□□□□ -0.57
LPCAT3-208ENST00000538987 LTN1O94822 1766 aa11.46□□□□□ -0.58
LPCAT3-208ENST00000538987 CAMTA1Q9Y6Y1 1673 aa11.46□□□□□ -0.58
LPCAT3-208ENST00000538987 NEFMP07197 916 aa11.45□□□□□ -0.58
LPCAT3-208ENST00000538987 ZNF772Q68DY9 489 aaPredicted RBP11.45□□□□□ -0.58
LPCAT3-208ENST00000538987 SULT6B1Q6IMI4 303 aa11.45□□□□□ -0.58
LPCAT3-208ENST00000538987 PNISRQ8TF01 805 aaKnown RBP11.45□□□□□ -0.58
LPCAT3-208ENST00000538987 PNNQ9H307 717 aaKnown RBP11.45□□□□□ -0.58
LPCAT3-208ENST00000538987 QTRT2Q9H974 415 aaKnown RBP11.45□□□□□ -0.58
LPCAT3-208ENST00000538987 COL14A1Q05707 1796 aaKnown RBP11.45□□□□□ -0.58
LPCAT3-208ENST00000538987 PEAK1Q9H792 1746 aa11.44□□□□□ -0.58
LPCAT3-208ENST00000538987 A0A0G2JS52 829 aa11.44□□□□□ -0.58
LPCAT3-208ENST00000538987 MYT1Q01538 1121 aa11.44□□□□□ -0.58
LPCAT3-208ENST00000538987 TRPC5Q9UL62 973 aaPredicted RBP11.44□□□□□ -0.58
LPCAT3-208ENST00000538987 ADAMTS8Q9UP79 889 aa11.44□□□□□ -0.58
LPCAT3-208ENST00000538987 COL5A2P05997 1499 aaPredicted RBP11.44□□□□□ -0.58
LPCAT3-208ENST00000538987 VPS72Q15906 364 aa11.43□□□□□ -0.58
LPCAT3-208ENST00000538987 RAPGEF4Q8WZA2 1011 aa11.43□□□□□ -0.58
LPCAT3-208ENST00000538987 CARD10Q9BWT7 1032 aa11.43□□□□□ -0.58
LPCAT3-208ENST00000538987 SLIT2O94813 1529 aa11.43□□□□□ -0.58
LPCAT3-208ENST00000538987 ABCC6O95255 1503 aa11.42□□□□□ -0.58
LPCAT3-208ENST00000538987 FCHSD2O94868 740 aa11.42□□□□□ -0.58
LPCAT3-208ENST00000538987 AEBP1Q8IUX7 1158 aa11.42□□□□□ -0.58
LPCAT3-208ENST00000538987 TCP11L2Q8N4U5 519 aa11.42□□□□□ -0.58
LPCAT3-208ENST00000538987 CRB1P82279 1406 aa11.42□□□□□ -0.58
LPCAT3-208ENST00000538987 IGSF1Q8N6C5 1336 aa11.41□□□□□ -0.58
LPCAT3-208ENST00000538987 COL3A1P02461 1466 aaPredicted RBP11.41□□□□□ -0.58
LPCAT3-208ENST00000538987 BCL9LQ86UU0 1499 aa11.41□□□□□ -0.58
LPCAT3-208ENST00000538987 TATP17735 454 aaPredicted RBP11.41□□□□□ -0.58
LPCAT3-208ENST00000538987 PRKAR2BP31323 418 aa11.41□□□□□ -0.58
LPCAT3-208ENST00000538987 CCDC146Q8IYE0 955 aa11.41□□□□□ -0.58
LPCAT3-208ENST00000538987 GJD4Q96KN9 370 aaPredicted RBP11.41□□□□□ -0.58
LPCAT3-208ENST00000538987 COL18A1P39060 1754 aa11.41□□□□□ -0.58
LPCAT3-208ENST00000538987 SPATA31A1Q5TZJ5 1347 aa11.4□□□□□ -0.58
LPCAT3-208ENST00000538987 SPATA31A5Q5VU36 1347 aa11.4□□□□□ -0.58
LPCAT3-208ENST00000538987 SPATA31A7Q8IWB4 1347 aa11.4□□□□□ -0.58
LPCAT3-208ENST00000538987 MAPK8IP3Q9UPT6 1336 aa11.4□□□□□ -0.58
LPCAT3-208ENST00000538987 IL2RBP14784 551 aa11.4□□□□□ -0.58
LPCAT3-208ENST00000538987 FAM98CQ17RN3 349 aaKnown RBP11.4□□□□□ -0.58
LPCAT3-208ENST00000538987 THRAP3Q9Y2W1 955 aaKnown RBP11.4□□□□□ -0.58
LPCAT3-208ENST00000538987 LMO7Q8WWI1 1683 aa11.4□□□□□ -0.59
LPCAT3-208ENST00000538987 RSPH6AQ9H0K4 717 aa11.39□□□□□ -0.59
LPCAT3-208ENST00000538987 PLCH1Q4KWH8 1693 aa11.39□□□□□ -0.59
LPCAT3-208ENST00000538987 RGPD5Q99666 1765 aa11.39□□□□□ -0.59
LPCAT3-208ENST00000538987 RXRBP28702 533 aa11.38□□□□□ -0.59
LPCAT3-208ENST00000538987 PLEKHO1Q53GL0 409 aaPredicted RBP11.38□□□□□ -0.59
LPCAT3-208ENST00000538987 RUNDC1Q96C34 613 aa11.38□□□□□ -0.59
LPCAT3-208ENST00000538987 CDCA7Q9BWT1 371 aaPredicted RBP11.38□□□□□ -0.59
LPCAT3-208ENST00000538987 SPG7Q9UQ90 795 aa11.38□□□□□ -0.59
LPCAT3-208ENST00000538987 SENP3-EIF4A1A0A087X0R7 540 aa11.37□□□□□ -0.59
LPCAT3-208ENST00000538987 EXOC5O00471 708 aa11.37□□□□□ -0.59
LPCAT3-208ENST00000538987 RBM6P78332 1123 aaKnown RBP11.37□□□□□ -0.59
LPCAT3-208ENST00000538987 NEUROD2Q15784 382 aa11.37□□□□□ -0.59
LPCAT3-208ENST00000538987 AMOTQ4VCS5 1084 aa11.37□□□□□ -0.59
LPCAT3-208ENST00000538987 ZCRB1Q8TBF4 217 aaKnown RBP11.37□□□□□ -0.59
LPCAT3-208ENST00000538987 NWD2Q9ULI1 1742 aa11.37□□□□□ -0.59
LPCAT3-208ENST00000538987 DDB1Q16531 1140 aa11.36□□□□□ -0.59
LPCAT3-208ENST00000538987 BARGINQ6ZT62 677 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms