RNA–Protein interactions for RNA: ENST00000536034.1

LINC02449-203, Transcript of long intergenic non-protein coding RNA 2449, humanhuman

TSL 3 BASIC

Gene LINC02449, Length 451 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02449-203ENST00000536034 GGNBP2Q9H3C7 697 aa20.8■□□□□ 0.92
LINC02449-203ENST00000536034 STRN4Q9NRL3 753 aa20.8■□□□□ 0.92
LINC02449-203ENST00000536034 KIF20BQ96Q89 1820 aa20.8■□□□□ 0.92
LINC02449-203ENST00000536034 ZEB1P37275 1124 aaPredicted RBP20.79■□□□□ 0.92
LINC02449-203ENST00000536034 CCDC7Q96M83 1385 aa20.79■□□□□ 0.92
LINC02449-203ENST00000536034 SPATA31A1Q5TZJ5 1347 aa20.78■□□□□ 0.92
LINC02449-203ENST00000536034 AXIN2Q9Y2T1 843 aa20.77■□□□□ 0.92
LINC02449-203ENST00000536034 LARP1Q6PKG0 1096 aaKnown RBP20.76■□□□□ 0.91
LINC02449-203ENST00000536034 WASHC2AQ641Q2 1341 aa20.76■□□□□ 0.91
LINC02449-203ENST00000536034 CRB1P82279 1406 aa20.75■□□□□ 0.91
LINC02449-203ENST00000536034 WDR17Q8IZU2 1322 aa20.75■□□□□ 0.91
LINC02449-203ENST00000536034 NSD2O96028 1365 aa20.74■□□□□ 0.91
LINC02449-203ENST00000536034 THRAP3Q9Y2W1 955 aaKnown RBP20.74■□□□□ 0.91
LINC02449-203ENST00000536034 LTN1O94822 1766 aa20.74■□□□□ 0.91
LINC02449-203ENST00000536034 BLMP54132 1417 aaPredicted RBP20.73■□□□□ 0.91
LINC02449-203ENST00000536034 FAM98CQ17RN3 349 aaKnown RBP20.73■□□□□ 0.91
LINC02449-203ENST00000536034 SEPT12Q8IYM1 358 aa20.73■□□□□ 0.91
LINC02449-203ENST00000536034 IP6K1Q92551 441 aa20.73■□□□□ 0.91
LINC02449-203ENST00000536034 KNSTRNQ9Y448 316 aa20.73■□□□□ 0.91
LINC02449-203ENST00000536034 MAP3K19Q56UN5 1328 aa20.73■□□□□ 0.91
LINC02449-203ENST00000536034 BARGINQ6ZT62 677 aa20.72■□□□□ 0.91
LINC02449-203ENST00000536034 RTL1A6NKG5 1358 aa20.72■□□□□ 0.91
LINC02449-203ENST00000536034 TCP11L2Q8N4U5 519 aa20.71■□□□□ 0.91
LINC02449-203ENST00000536034 KIF24Q5T7B8 1368 aa20.71■□□□□ 0.91
LINC02449-203ENST00000536034 TOM1L2Q6ZVM7 507 aa20.7■□□□□ 0.9
LINC02449-203ENST00000536034 ERBB3P21860 1342 aa20.7■□□□□ 0.9
LINC02449-203ENST00000536034 CSB-PGBD3P0DP91 1061 aa20.69■□□□□ 0.9
LINC02449-203ENST00000536034 AMPHP49418 695 aa20.69■□□□□ 0.9
LINC02449-203ENST00000536034 CARD10Q9BWT7 1032 aa20.69■□□□□ 0.9
LINC02449-203ENST00000536034 USP35Q9P2H5 1018 aa20.69■□□□□ 0.9
LINC02449-203ENST00000536034 THSD7AQ9UPZ6 1657 aa20.69■□□□□ 0.9
LINC02449-203ENST00000536034 ANKRD26Q9UPS8 1709 aa20.69■□□□□ 0.9
LINC02449-203ENST00000536034 RGPD5Q99666 1765 aa20.68■□□□□ 0.9
LINC02449-203ENST00000536034 A0A0G2JS52 829 aa20.68■□□□□ 0.9
LINC02449-203ENST00000536034 FBLN1P23142 703 aa20.68■□□□□ 0.9
LINC02449-203ENST00000536034 HOXC9P31274 260 aa20.68■□□□□ 0.9
LINC02449-203ENST00000536034 MYT1Q01538 1121 aa20.68■□□□□ 0.9
LINC02449-203ENST00000536034 RRS1Q15050 365 aaKnown RBP20.67■□□□□ 0.9
LINC02449-203ENST00000536034 ANKRD24Q8TF21 1146 aa20.67■□□□□ 0.9
LINC02449-203ENST00000536034 PER1O15534 1290 aaPredicted RBP20.66■□□□□ 0.9
LINC02449-203ENST00000536034 FLT4P35916 1363 aa20.65■□□□□ 0.9
LINC02449-203ENST00000536034 AMER1Q5JTC6 1135 aaPredicted RBP20.65■□□□□ 0.9
LINC02449-203ENST00000536034 KRT27Q7Z3Y8 459 aa20.65■□□□□ 0.9
LINC02449-203ENST00000536034 CDCA7Q9BWT1 371 aaPredicted RBP20.64■□□□□ 0.89
LINC02449-203ENST00000536034 INSRP06213 1382 aa20.63■□□□□ 0.89
LINC02449-203ENST00000536034 BRWD3Q6RI45 1802 aa20.63■□□□□ 0.89
LINC02449-203ENST00000536034 FAM208AQ9UK61 1670 aaKnown RBP20.63■□□□□ 0.89
LINC02449-203ENST00000536034 NPC1L1Q9UHC9 1359 aa20.62■□□□□ 0.89
LINC02449-203ENST00000536034 MORC1Q86VD1 984 aa20.62■□□□□ 0.89
LINC02449-203ENST00000536034 UPF1Q92900 1129 aaKnown RBP eCLIP20.62■□□□□ 0.89
LINC02449-203ENST00000536034 NLRP2Q9NX02 1062 aa20.62■□□□□ 0.89
LINC02449-203ENST00000536034 SMG6Q86US8 1419 aaKnown RBP20.61■□□□□ 0.89
LINC02449-203ENST00000536034 EMILIN1Q9Y6C2 1016 aa20.61■□□□□ 0.89
LINC02449-203ENST00000536034 EP400Q96L91 3159 aa20.61■□□□□ 0.89
LINC02449-203ENST00000536034 POLKQ9UBT6 870 aa20.6■□□□□ 0.89
LINC02449-203ENST00000536034 PEAK1Q9H792 1746 aa20.6■□□□□ 0.89
LINC02449-203ENST00000536034 PARP4Q9UKK3 1724 aaKnown RBP20.6■□□□□ 0.89
LINC02449-203ENST00000536034 DISP2A7MBM2 1401 aa20.6■□□□□ 0.89
LINC02449-203ENST00000536034 LTV1Q96GA3 475 aaPredicted RBP20.59■□□□□ 0.89
LINC02449-203ENST00000536034 TNNT2P45379 298 aaPredicted RBP20.58■□□□□ 0.89
LINC02449-203ENST00000536034 PDE3BQ13370 1112 aa20.58■□□□□ 0.89
LINC02449-203ENST00000536034 HSP90AB2PQ58FF8 381 aa20.58■□□□□ 0.89
LINC02449-203ENST00000536034 WNK3Q9BYP7 1800 aa20.57■□□□□ 0.88
LINC02449-203ENST00000536034 CCDC125Q86Z20 511 aa20.57■□□□□ 0.88
LINC02449-203ENST00000536034 PPM1GO15355 546 aaPredicted RBP20.56■□□□□ 0.88
LINC02449-203ENST00000536034 DDB1Q16531 1140 aa20.56■□□□□ 0.88
LINC02449-203ENST00000536034 MAP2P11137 1827 aaKnown RBP20.55■□□□□ 0.88
LINC02449-203ENST00000536034 LRRC37A3O60309 1634 aa20.54■□□□□ 0.88
LINC02449-203ENST00000536034 IL2RBP14784 551 aa20.54■□□□□ 0.88
LINC02449-203ENST00000536034 CC2D1BQ5T0F9 858 aaKnown RBP20.53■□□□□ 0.88
LINC02449-203ENST00000536034 FAM196AQ6ZSG2 479 aa20.53■□□□□ 0.88
LINC02449-203ENST00000536034 EXOC5O00471 708 aa20.52■□□□□ 0.88
LINC02449-203ENST00000536034 NBPF6Q5VWK0 638 aa20.52■□□□□ 0.88
LINC02449-203ENST00000536034 NBPF4Q96M43 638 aa20.52■□□□□ 0.88
LINC02449-203ENST00000536034 TNS2Q63HR2 1409 aa20.52■□□□□ 0.87
LINC02449-203ENST00000536034 FAM182BQ5T319 152 aa20.49■□□□□ 0.87
LINC02449-203ENST00000536034 OVOS2A0A0G2JMS6 1433 aa20.49■□□□□ 0.87
LINC02449-203ENST00000536034 NCAPD2Q15021 1401 aa20.48■□□□□ 0.87
LINC02449-203ENST00000536034 BCL9O00512 1426 aa20.47■□□□□ 0.87
LINC02449-203ENST00000536034 EIF4A2Q14240 407 aaKnown RBP20.47■□□□□ 0.87
LINC02449-203ENST00000536034 RGPD2P0DJD1 1756 aa20.46■□□□□ 0.87
LINC02449-203ENST00000536034 SF3B2Q13435 895 aaKnown RBP20.46■□□□□ 0.87
LINC02449-203ENST00000536034 MARCH10Q8NA82 808 aaPredicted RBP20.46■□□□□ 0.87
LINC02449-203ENST00000536034 RAPGEF4Q8WZA2 1011 aa20.46■□□□□ 0.87
LINC02449-203ENST00000536034 MTHFSP49914 203 aa20.45■□□□□ 0.86
LINC02449-203ENST00000536034 USHBP1Q8N6Y0 703 aa20.45■□□□□ 0.86
LINC02449-203ENST00000536034 TATP17735 454 aaPredicted RBP20.44■□□□□ 0.86
LINC02449-203ENST00000536034 EYA1Q99502 592 aa20.44■□□□□ 0.86
LINC02449-203ENST00000536034 MEGF6O75095 1541 aa20.43■□□□□ 0.86
LINC02449-203ENST00000536034 RGPD1P0DJD0 1748 aa20.43■□□□□ 0.86
LINC02449-203ENST00000536034 PLEKHG2Q9H7P9 1386 aa20.43■□□□□ 0.86
LINC02449-203ENST00000536034 CNGB1Q14028 1251 aaPredicted RBP20.42■□□□□ 0.86
LINC02449-203ENST00000536034 ZCRB1Q8TBF4 217 aaKnown RBP20.42■□□□□ 0.86
LINC02449-203ENST00000536034 IGSF1Q8N6C5 1336 aa20.42■□□□□ 0.86
LINC02449-203ENST00000536034 DDX10Q13206 875 aaKnown RBP20.41■□□□□ 0.86
LINC02449-203ENST00000536034 TRIM37O94972 964 aa20.4■□□□□ 0.86
LINC02449-203ENST00000536034 BAG6P46379 1132 aa20.4■□□□□ 0.86
LINC02449-203ENST00000536034 IL13P35225 146 aa20.39■□□□□ 0.85
LINC02449-203ENST00000536034 TNS1Q9HBL0 1735 aaKnown RBP20.38■□□□□ 0.85
LINC02449-203ENST00000536034 DDX54Q8TDD1 881 aaKnown RBP20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms