RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 AATKQ6ZMQ8 1374 aa15.31■□□□□ 0.04
CCDC60-202ENST00000535685 USP54Q70EL1 1684 aa15.31■□□□□ 0.04
CCDC60-202ENST00000535685 CLSPNQ9HAW4 1339 aa15.29■□□□□ 0.04
CCDC60-202ENST00000535685 CD163L1Q9NR16 1453 aa15.28■□□□□ 0.04
CCDC60-202ENST00000535685 KTN1Q86UP2 1357 aaKnown RBP15.28■□□□□ 0.04
CCDC60-202ENST00000535685 EVA1CP58658 441 aa15.28■□□□□ 0.04
CCDC60-202ENST00000535685 TIMELESSQ9UNS1 1208 aa15.28■□□□□ 0.04
CCDC60-202ENST00000535685 THRAP3Q9Y2W1 955 aaKnown RBP15.28■□□□□ 0.04
CCDC60-202ENST00000535685 COL5A2P05997 1499 aaPredicted RBP15.27■□□□□ 0.04
CCDC60-202ENST00000535685 USP31Q70CQ4 1352 aa15.27■□□□□ 0.04
CCDC60-202ENST00000535685 RGPD1P0DJD0 1748 aa15.27■□□□□ 0.04
CCDC60-202ENST00000535685 KCNH5Q8NCM2 988 aa15.27■□□□□ 0.04
CCDC60-202ENST00000535685 TESK2Q96S53 571 aa15.27■□□□□ 0.04
CCDC60-202ENST00000535685 STRN4Q9NRL3 753 aa15.27■□□□□ 0.04
CCDC60-202ENST00000535685 SF3B2Q13435 895 aaKnown RBP15.26■□□□□ 0.03
CCDC60-202ENST00000535685 LARP1Q6PKG0 1096 aaKnown RBP15.26■□□□□ 0.03
CCDC60-202ENST00000535685 TCP11L2Q8N4U5 519 aa15.26■□□□□ 0.03
CCDC60-202ENST00000535685 ABCC6O95255 1503 aa15.26■□□□□ 0.03
CCDC60-202ENST00000535685 PARP4Q9UKK3 1724 aaKnown RBP15.26■□□□□ 0.03
CCDC60-202ENST00000535685 NINLQ9Y2I6 1382 aa15.25■□□□□ 0.03
CCDC60-202ENST00000535685 A0A0G2JS52 829 aa15.25■□□□□ 0.03
CCDC60-202ENST00000535685 MYT1Q01538 1121 aa15.25■□□□□ 0.03
CCDC60-202ENST00000535685 ARHGEF25Q86VW2 580 aa15.25■□□□□ 0.03
CCDC60-202ENST00000535685 NFAT5O94916 1531 aa15.25■□□□□ 0.03
CCDC60-202ENST00000535685 RGPD5Q99666 1765 aa15.25■□□□□ 0.03
CCDC60-202ENST00000535685 CRB1P82279 1406 aa15.25■□□□□ 0.03
CCDC60-202ENST00000535685 ZRANB1Q9UGI0 708 aa15.24■□□□□ 0.03
CCDC60-202ENST00000535685 DISP2A7MBM2 1401 aa15.24■□□□□ 0.03
CCDC60-202ENST00000535685 EDC4Q6P2E9 1401 aaKnown RBP15.24■□□□□ 0.03
CCDC60-202ENST00000535685 ST20-MTHFSA0A0A6YYL1 179 aa15.23■□□□□ 0.03
CCDC60-202ENST00000535685 SLC12A5Q9H2X9 1139 aa15.23■□□□□ 0.03
CCDC60-202ENST00000535685 TNS1Q9HBL0 1735 aaKnown RBP15.23■□□□□ 0.03
CCDC60-202ENST00000535685 FAM196AQ6ZSG2 479 aa15.22■□□□□ 0.03
CCDC60-202ENST00000535685 HDGFL2Q7Z4V5 671 aaPredicted RBP15.22■□□□□ 0.03
CCDC60-202ENST00000535685 DEFB132Q7Z7B7 95 aa15.22■□□□□ 0.03
CCDC60-202ENST00000535685 TERF2IPQ9NYB0 399 aa15.22■□□□□ 0.03
CCDC60-202ENST00000535685 C11orf95C9JLR9 678 aaPredicted RBP15.21■□□□□ 0.03
CCDC60-202ENST00000535685 BAG6P46379 1132 aa15.21■□□□□ 0.03
CCDC60-202ENST00000535685 WNK3Q9BYP7 1800 aa15.21■□□□□ 0.03
CCDC60-202ENST00000535685 WDR17Q8IZU2 1322 aa15.2■□□□□ 0.02
CCDC60-202ENST00000535685 TMC1Q8TDI8 760 aa15.2■□□□□ 0.02
CCDC60-202ENST00000535685 USP35Q9P2H5 1018 aa15.2■□□□□ 0.02
CCDC60-202ENST00000535685 AXIN2Q9Y2T1 843 aa15.2■□□□□ 0.02
CCDC60-202ENST00000535685 A0A1W2PP64 1363 aa15.2■□□□□ 0.02
CCDC60-202ENST00000535685 LTN1O94822 1766 aa15.19■□□□□ 0.02
CCDC60-202ENST00000535685 SBF2Q86WG5 1849 aa15.18■□□□□ 0.02
CCDC60-202ENST00000535685 PDE3BQ13370 1112 aa15.18■□□□□ 0.02
CCDC60-202ENST00000535685 CDCA7Q9BWT1 371 aaPredicted RBP15.18■□□□□ 0.02
CCDC60-202ENST00000535685 USP47Q96K76 1375 aa15.18■□□□□ 0.02
CCDC60-202ENST00000535685 OVOS2A0A0J9YW53 1432 aa15.17■□□□□ 0.02
CCDC60-202ENST00000535685 OVOS2Q6IE36 1432 aa15.17■□□□□ 0.02
CCDC60-202ENST00000535685 PEAK1Q9H792 1746 aa15.17■□□□□ 0.02
CCDC60-202ENST00000535685 VASPP50552 380 aaPredicted RBP15.17■□□□□ 0.02
CCDC60-202ENST00000535685 FAM182BQ5T319 152 aa15.17■□□□□ 0.02
CCDC60-202ENST00000535685 NME9Q86XW9 330 aa15.17■□□□□ 0.02
CCDC60-202ENST00000535685 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.17■□□□□ 0.02
CCDC60-202ENST00000535685 CARD10Q9BWT7 1032 aa15.17■□□□□ 0.02
CCDC60-202ENST00000535685 SRCAPQ6ZRS2 3230 aa15.17■□□□□ 0.02
CCDC60-202ENST00000535685 PARD3Q8TEW0 1356 aa15.16■□□□□ 0.02
CCDC60-202ENST00000535685 DSG3P32926 999 aa15.16■□□□□ 0.02
CCDC60-202ENST00000535685 TMF1P82094 1093 aa15.16■□□□□ 0.02
CCDC60-202ENST00000535685 TOM1L2Q6ZVM7 507 aa15.16■□□□□ 0.02
CCDC60-202ENST00000535685 LRRC37A3O60309 1634 aa15.16■□□□□ 0.02
CCDC60-202ENST00000535685 ANKRD36BQ8N2N9 1353 aa15.15■□□□□ 0.02
CCDC60-202ENST00000535685 BCL9O00512 1426 aa15.15■□□□□ 0.02
CCDC60-202ENST00000535685 CCDC7Q96M83 1385 aa15.14■□□□□ 0.01
CCDC60-202ENST00000535685 ZBTB7CA1YPR0 619 aa15.14■□□□□ 0.01
CCDC60-202ENST00000535685 CDCA8Q53HL2 280 aa15.14■□□□□ 0.01
CCDC60-202ENST00000535685 OVOS2A0A0G2JMS6 1433 aa15.13■□□□□ 0.01
CCDC60-202ENST00000535685 TRIM37O94972 964 aa15.13■□□□□ 0.01
CCDC60-202ENST00000535685 EN1Q05925 392 aaPredicted RBP15.13■□□□□ 0.01
CCDC60-202ENST00000535685 CAMKK2Q96RR4 588 aa15.13■□□□□ 0.01
CCDC60-202ENST00000535685 RGPD3A6NKT7 1758 aaPredicted RBP15.12■□□□□ 0.01
CCDC60-202ENST00000535685 RGPD4Q7Z3J3 1758 aa15.12■□□□□ 0.01
CCDC60-202ENST00000535685 SOX12O15370 315 aa15.12■□□□□ 0.01
CCDC60-202ENST00000535685 DDB1Q16531 1140 aa15.12■□□□□ 0.01
CCDC60-202ENST00000535685 RREB1Q92766 1687 aa15.12■□□□□ 0.01
CCDC60-202ENST00000535685 ERBB3P21860 1342 aa15.12■□□□□ 0.01
CCDC60-202ENST00000535685 PCGF6Q9BYE7 350 aa15.11■□□□□ 0.01
CCDC60-202ENST00000535685 FAM208AQ9UK61 1670 aaKnown RBP15.11■□□□□ 0.01
CCDC60-202ENST00000535685 CSB-PGBD3P0DP91 1061 aa15.1■□□□□ 0.01
CCDC60-202ENST00000535685 APBA3O96018 575 aa15.09■□□□□ 0.01
CCDC60-202ENST00000535685 IP6K1Q92551 441 aa15.09■□□□□ 0.01
CCDC60-202ENST00000535685 COG3Q96JB2 828 aa15.09■□□□□ 0.01
CCDC60-202ENST00000535685 LRP5O75197 1615 aa15.09■□□□□ 0.01
CCDC60-202ENST00000535685 EZH2Q15910 746 aaKnown RBP15.08■□□□□ 0
CCDC60-202ENST00000535685 KAT6BQ8WYB5 2073 aa15.08■□□□□ 0
CCDC60-202ENST00000535685 MYOM1P52179 1685 aa15.07■□□□□ 0
CCDC60-202ENST00000535685 NUP188Q5SRE5 1749 aa15.07■□□□□ 0
CCDC60-202ENST00000535685 MARCH10Q8NA82 808 aaPredicted RBP15.07■□□□□ 0
CCDC60-202ENST00000535685 TNS2Q63HR2 1409 aa15.07■□□□□ 0
CCDC60-202ENST00000535685 KIF20BQ96Q89 1820 aa15.06■□□□□ 0
CCDC60-202ENST00000535685 EXOC5O00471 708 aa15.06■□□□□ 0
CCDC60-202ENST00000535685 FYB1O15117 783 aa15.06■□□□□ 0
CCDC60-202ENST00000535685 PLSCR1O15162 318 aa15.06■□□□□ 0
CCDC60-202ENST00000535685 ANKRD24Q8TF21 1146 aa15.06■□□□□ 0
CCDC60-202ENST00000535685 BCL11BQ9C0K0 894 aaPredicted RBP15.06■□□□□ 0
CCDC60-202ENST00000535685 RTL1A6NKG5 1358 aa15.04■□□□□ -0
CCDC60-202ENST00000535685 MAP3K19Q56UN5 1328 aa15.04■□□□□ -0
CCDC60-202ENST00000535685 IL2RBP14784 551 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms