RNA–Protein interactions for RNA: ENST00000535535.5

LMO3-212, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene LMO3, Length 1,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-212ENST00000535535 FGD5Q6ZNL6 1462 aa13.26□□□□□ -0.29
LMO3-212ENST00000535535 SKIV2LQ15477 1246 aaKnown RBP13.26□□□□□ -0.29
LMO3-212ENST00000535535 LCE2AQ5TA79 106 aaPredicted RBP13.26□□□□□ -0.29
LMO3-212ENST00000535535 DDRGK1Q96HY6 314 aa13.26□□□□□ -0.29
LMO3-212ENST00000535535 FBXO31Q5XUX0 539 aaPredicted RBP13.25□□□□□ -0.29
LMO3-212ENST00000535535 CAPN5O15484 640 aaPredicted RBP13.24□□□□□ -0.29
LMO3-212ENST00000535535 NNTQ13423 1086 aa13.24□□□□□ -0.29
LMO3-212ENST00000535535 SYNJ2O15056 1496 aa13.24□□□□□ -0.29
LMO3-212ENST00000535535 BMP1P13497 986 aa13.23□□□□□ -0.29
LMO3-212ENST00000535535 TRIM46Q7Z4K8 759 aa13.23□□□□□ -0.29
LMO3-212ENST00000535535 CDK15Q96Q40 435 aa13.23□□□□□ -0.29
LMO3-212ENST00000535535 GRIN2BQ13224 1484 aa13.23□□□□□ -0.29
LMO3-212ENST00000535535 ADH1CP00326 375 aa13.23□□□□□ -0.29
LMO3-212ENST00000535535 TREML4Q6UXN2 200 aa13.23□□□□□ -0.29
LMO3-212ENST00000535535 BPHLQ86WA6 291 aaPredicted RBP13.23□□□□□ -0.29
LMO3-212ENST00000535535 KIFC2Q96AC6 838 aa13.23□□□□□ -0.29
LMO3-212ENST00000535535 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.23□□□□□ -0.29
LMO3-212ENST00000535535 CUX1P39880 1505 aa13.22□□□□□ -0.29
LMO3-212ENST00000535535 GAPVD1Q14C86 1478 aa13.22□□□□□ -0.29
LMO3-212ENST00000535535 ARMC2Q8NEN0 867 aa13.22□□□□□ -0.29
LMO3-212ENST00000535535 CTDSPL2Q05D32 466 aa13.21□□□□□ -0.3
LMO3-212ENST00000535535 NBPF14Q5TI25 921 aa13.21□□□□□ -0.3
LMO3-212ENST00000535535 SH3RF1Q7Z6J0 888 aa13.21□□□□□ -0.3
LMO3-212ENST00000535535 PROCA1Q8NCQ7 364 aaPredicted RBP13.21□□□□□ -0.3
LMO3-212ENST00000535535 CHMP7Q8WUX9 453 aaPredicted RBP13.21□□□□□ -0.3
LMO3-212ENST00000535535 C1QTNF2Q9BXJ5 285 aa13.21□□□□□ -0.3
LMO3-212ENST00000535535 SH3BP5LQ7L8J4 393 aa13.2□□□□□ -0.3
LMO3-212ENST00000535535 AGERQ15109 404 aa13.19□□□□□ -0.3
LMO3-212ENST00000535535 PPP2R2DQ66LE6 453 aa13.19□□□□□ -0.3
LMO3-212ENST00000535535 TIMP2P16035 220 aa13.18□□□□□ -0.3
LMO3-212ENST00000535535 KLF16Q9BXK1 252 aaPredicted RBP13.18□□□□□ -0.3
LMO3-212ENST00000535535 ABCA5Q8WWZ7 1642 aa13.17□□□□□ -0.3
LMO3-212ENST00000535535 NFX1Q12986 1120 aaKnown RBP13.16□□□□□ -0.3
LMO3-212ENST00000535535 ARID5BQ14865 1188 aa13.16□□□□□ -0.3
LMO3-212ENST00000535535 LRRN4Q8WUT4 740 aa13.16□□□□□ -0.3
LMO3-212ENST00000535535 ERCC6L2Q5T890 1561 aa13.15□□□□□ -0.3
LMO3-212ENST00000535535 NR3C2P08235 984 aa13.15□□□□□ -0.3
LMO3-212ENST00000535535 WDR4P57081 412 aaKnown RBP13.15□□□□□ -0.3
LMO3-212ENST00000535535 ERICH6Q7L0X2 663 aa13.15□□□□□ -0.3
LMO3-212ENST00000535535 GPKOWQ92917 476 aaPredicted RBP eCLIP13.15□□□□□ -0.3
LMO3-212ENST00000535535 KIF13AQ9H1H9 1805 aa13.15□□□□□ -0.3
LMO3-212ENST00000535535 GRM5P41594 1212 aa13.14□□□□□ -0.31
LMO3-212ENST00000535535 TRMT44Q8IYL2 757 aaKnown RBP13.14□□□□□ -0.31
LMO3-212ENST00000535535 WFS1O76024 890 aa13.13□□□□□ -0.31
LMO3-212ENST00000535535 NR5A1Q13285 461 aa13.13□□□□□ -0.31
LMO3-212ENST00000535535 MAP4K5Q9Y4K4 846 aa13.12□□□□□ -0.31
LMO3-212ENST00000535535 MAGEB6P1A0A0J9YX57 407 aa13.1□□□□□ -0.31
LMO3-212ENST00000535535 SHROOM2Q13796 1616 aa13.1□□□□□ -0.31
LMO3-212ENST00000535535 ABCA10Q8WWZ4 1543 aa13.1□□□□□ -0.31
LMO3-212ENST00000535535 CEP170Q5SW79 1584 aa13.1□□□□□ -0.31
LMO3-212ENST00000535535 LCE2CQ5TA81 110 aa13.1□□□□□ -0.31
LMO3-212ENST00000535535 MRPL14Q6P1L8 145 aaKnown RBP13.1□□□□□ -0.31
LMO3-212ENST00000535535 ZFP42Q96MM3 310 aa13.1□□□□□ -0.31
LMO3-212ENST00000535535 FKBPLQ9UIM3 349 aa13.1□□□□□ -0.31
LMO3-212ENST00000535535 TERTO14746 1132 aaKnown RBP13.09□□□□□ -0.31
LMO3-212ENST00000535535 ITPKCQ96DU7 683 aa13.09□□□□□ -0.31
LMO3-212ENST00000535535 ZFAND3Q9H8U3 227 aa13.09□□□□□ -0.31
LMO3-212ENST00000535535 ADAMTS12P58397 1594 aa13.09□□□□□ -0.31
LMO3-212ENST00000535535 GRIN2AQ12879 1464 aa13.08□□□□□ -0.31
LMO3-212ENST00000535535 ZIC2O95409 532 aaPredicted RBP13.08□□□□□ -0.32
LMO3-212ENST00000535535 FSHRP23945 695 aa13.08□□□□□ -0.32
LMO3-212ENST00000535535 NR6A1Q15406 480 aa13.08□□□□□ -0.32
LMO3-212ENST00000535535 ERFEQ4G0M1 354 aa13.08□□□□□ -0.32
LMO3-212ENST00000535535 CARD14Q9BXL6 1004 aa13.08□□□□□ -0.32
LMO3-212ENST00000535535 AP1G2O75843 785 aa13.07□□□□□ -0.32
LMO3-212ENST00000535535 PDXDC2PQ6P474 469 aa13.07□□□□□ -0.32
LMO3-212ENST00000535535 ZC3H4Q9UPT8 1303 aaKnown RBP13.07□□□□□ -0.32
LMO3-212ENST00000535535 ATP1B4Q9UN42 357 aaPredicted RBP13.06□□□□□ -0.32
LMO3-212ENST00000535535 VASH1Q7L8A9 365 aaPredicted RBP13.05□□□□□ -0.32
LMO3-212ENST00000535535 GOPCQ9HD26 462 aa13.05□□□□□ -0.32
LMO3-212ENST00000535535 NUP160Q12769 1436 aa13.05□□□□□ -0.32
LMO3-212ENST00000535535 USP17L8P0C7I0 530 aa13.04□□□□□ -0.32
LMO3-212ENST00000535535 PURBQ96QR8 312 aaKnown RBP13.04□□□□□ -0.32
LMO3-212ENST00000535535 NEUROD2Q15784 382 aa13.04□□□□□ -0.32
LMO3-212ENST00000535535 HMX1Q9NP08 348 aaPredicted RBP13.04□□□□□ -0.32
LMO3-212ENST00000535535 RFC5P40937 340 aa13.03□□□□□ -0.32
LMO3-212ENST00000535535 SCARF1Q14162 830 aa13.03□□□□□ -0.32
LMO3-212ENST00000535535 OCSTAMPQ9BR26 566 aa13.03□□□□□ -0.32
LMO3-212ENST00000535535 ARHGAP9Q9BRR9 750 aa13.03□□□□□ -0.32
LMO3-212ENST00000535535 MEIOBQ8N635 442 aa13.02□□□□□ -0.33
LMO3-212ENST00000535535 EPS8L1Q8TE68 723 aa13.01□□□□□ -0.33
LMO3-212ENST00000535535 WIPF1O43516 503 aa13□□□□□ -0.33
LMO3-212ENST00000535535 NXF1Q9UBU9 619 aaKnown RBP13□□□□□ -0.33
LMO3-212ENST00000535535 CCDC116Q8IYX3 515 aa12.99□□□□□ -0.33
LMO3-212ENST00000535535 SLC10A4Q96EP9 437 aa12.98□□□□□ -0.33
LMO3-212ENST00000535535 PCMTD1Q96MG8 357 aaPredicted RBP12.98□□□□□ -0.33
LMO3-212ENST00000535535 BIVM-ERCC5R4GMW8 1640 aa12.98□□□□□ -0.33
LMO3-212ENST00000535535 BRPF1P55201 1214 aaPredicted RBP12.97□□□□□ -0.33
LMO3-212ENST00000535535 GPSM3Q9Y4H4 160 aa12.97□□□□□ -0.33
LMO3-212ENST00000535535 EMILIN1Q9Y6C2 1016 aa12.97□□□□□ -0.33
LMO3-212ENST00000535535 NPAS3Q8IXF0 933 aa12.97□□□□□ -0.33
LMO3-212ENST00000535535 LINC00528Q8N1L1 170 aa12.97□□□□□ -0.33
LMO3-212ENST00000535535 PTK2Q05397 1052 aa12.96□□□□□ -0.34
LMO3-212ENST00000535535 CDV3Q9UKY7 258 aaKnown RBP12.96□□□□□ -0.34
LMO3-212ENST00000535535 FHAD1B1AJZ9 1412 aa12.95□□□□□ -0.34
LMO3-212ENST00000535535 ERICH3Q5RHP9 1530 aa12.95□□□□□ -0.34
LMO3-212ENST00000535535 C6orf118Q5T5N4 469 aa12.95□□□□□ -0.34
LMO3-212ENST00000535535 ZBTB33Q86T24 672 aa12.95□□□□□ -0.34
LMO3-212ENST00000535535 TOP2BQ02880 1626 aa12.95□□□□□ -0.34
LMO3-212ENST00000535535 SOBPA7XYQ1 873 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms