RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 KIF7Q2M1P5 1343 aa30.04■■■□□ 2.4
SSPN-204ENST00000535504 FAM98CQ17RN3 349 aaKnown RBP30.04■■■□□ 2.4
SSPN-204ENST00000535504 PANK3Q9H999 370 aa30.04■■■□□ 2.4
SSPN-204ENST00000535504 COL5A2P05997 1499 aaPredicted RBP30.04■■■□□ 2.4
SSPN-204ENST00000535504 SPATA31A1Q5TZJ5 1347 aa30.03■■■□□ 2.4
SSPN-204ENST00000535504 TOM1L2Q6ZVM7 507 aa30.03■■■□□ 2.4
SSPN-204ENST00000535504 SEPT12Q8IYM1 358 aa30.03■■■□□ 2.4
SSPN-204ENST00000535504 CARD14Q9BXL6 1004 aa30.03■■■□□ 2.4
SSPN-204ENST00000535504 LARP1Q6PKG0 1096 aaKnown RBP30.02■■■□□ 2.4
SSPN-204ENST00000535504 C11orf95C9JLR9 678 aaPredicted RBP30.01■■■□□ 2.39
SSPN-204ENST00000535504 ZEB1P37275 1124 aaPredicted RBP30.01■■■□□ 2.39
SSPN-204ENST00000535504 THRAP3Q9Y2W1 955 aaKnown RBP30.01■■■□□ 2.39
SSPN-204ENST00000535504 LTN1O94822 1766 aa30■■■□□ 2.39
SSPN-204ENST00000535504 CRB1P82279 1406 aa30■■■□□ 2.39
SSPN-204ENST00000535504 AMPHP49418 695 aa30■■■□□ 2.39
SSPN-204ENST00000535504 TCP11L2Q8N4U5 519 aa30■■■□□ 2.39
SSPN-204ENST00000535504 KNSTRNQ9Y448 316 aa30■■■□□ 2.39
SSPN-204ENST00000535504 WDR17Q8IZU2 1322 aa29.98■■■□□ 2.39
SSPN-204ENST00000535504 ONECUT3O60422 494 aaPredicted RBP29.98■■■□□ 2.39
SSPN-204ENST00000535504 COL18A1P39060 1754 aa29.97■■■□□ 2.39
SSPN-204ENST00000535504 AXIN2Q9Y2T1 843 aa29.96■■■□□ 2.39
SSPN-204ENST00000535504 BARGINQ6ZT62 677 aa29.95■■■□□ 2.39
SSPN-204ENST00000535504 BLMP54132 1417 aaPredicted RBP29.95■■■□□ 2.38
SSPN-204ENST00000535504 NSD2O96028 1365 aa29.94■■■□□ 2.38
SSPN-204ENST00000535504 CCDC7Q96M83 1385 aa29.94■■■□□ 2.38
SSPN-204ENST00000535504 KRT27Q7Z3Y8 459 aa29.94■■■□□ 2.38
SSPN-204ENST00000535504 IP6K1Q92551 441 aa29.94■■■□□ 2.38
SSPN-204ENST00000535504 RTL1A6NKG5 1358 aa29.92■■■□□ 2.38
SSPN-204ENST00000535504 MAP3K19Q56UN5 1328 aa29.92■■■□□ 2.38
SSPN-204ENST00000535504 RGPD5Q99666 1765 aa29.91■■■□□ 2.38
SSPN-204ENST00000535504 ANKRD24Q8TF21 1146 aa29.9■■■□□ 2.38
SSPN-204ENST00000535504 CDCA7Q9BWT1 371 aaPredicted RBP29.9■■■□□ 2.38
SSPN-204ENST00000535504 CARD10Q9BWT7 1032 aa29.9■■■□□ 2.38
SSPN-204ENST00000535504 NLRP2Q9NX02 1062 aa29.9■■■□□ 2.38
SSPN-204ENST00000535504 ERBB3P21860 1342 aa29.9■■■□□ 2.38
SSPN-204ENST00000535504 SMG6Q86US8 1419 aaKnown RBP29.89■■■□□ 2.38
SSPN-204ENST00000535504 PDE3BQ13370 1112 aa29.89■■■□□ 2.38
SSPN-204ENST00000535504 RRS1Q15050 365 aaKnown RBP29.89■■■□□ 2.38
SSPN-204ENST00000535504 HOXC9P31274 260 aa29.87■■■□□ 2.37
SSPN-204ENST00000535504 LTV1Q96GA3 475 aaPredicted RBP29.87■■■□□ 2.37
SSPN-204ENST00000535504 KIF24Q5T7B8 1368 aa29.87■■■□□ 2.37
SSPN-204ENST00000535504 UPF1Q92900 1129 aaKnown RBP eCLIP29.86■■■□□ 2.37
SSPN-204ENST00000535504 BRWD3Q6RI45 1802 aa29.86■■■□□ 2.37
SSPN-204ENST00000535504 WASHC2AQ641Q2 1341 aa29.86■■■□□ 2.37
SSPN-204ENST00000535504 THSD7AQ9UPZ6 1657 aa29.85■■■□□ 2.37
SSPN-204ENST00000535504 ANKRD26Q9UPS8 1709 aa29.85■■■□□ 2.37
SSPN-204ENST00000535504 MORC1Q86VD1 984 aa29.85■■■□□ 2.37
SSPN-204ENST00000535504 PPM1GO15355 546 aaPredicted RBP29.84■■■□□ 2.37
SSPN-204ENST00000535504 FBLN1P23142 703 aa29.84■■■□□ 2.37
SSPN-204ENST00000535504 FLT4P35916 1363 aa29.84■■■□□ 2.37
SSPN-204ENST00000535504 SF3B2Q13435 895 aaKnown RBP29.83■■■□□ 2.37
SSPN-204ENST00000535504 CCDC125Q86Z20 511 aa29.82■■■□□ 2.36
SSPN-204ENST00000535504 FAM208AQ9UK61 1670 aaKnown RBP29.82■■■□□ 2.36
SSPN-204ENST00000535504 TNNT2P45379 298 aaPredicted RBP29.81■■■□□ 2.36
SSPN-204ENST00000535504 DDB1Q16531 1140 aa29.8■■■□□ 2.36
SSPN-204ENST00000535504 INSRP06213 1382 aa29.77■■■□□ 2.36
SSPN-204ENST00000535504 FAM196AQ6ZSG2 479 aa29.76■■■□□ 2.35
SSPN-204ENST00000535504 EMILIN1Q9Y6C2 1016 aa29.76■■■□□ 2.35
SSPN-204ENST00000535504 PARP4Q9UKK3 1724 aaKnown RBP29.76■■■□□ 2.35
SSPN-204ENST00000535504 IL2RBP14784 551 aa29.75■■■□□ 2.35
SSPN-204ENST00000535504 MAP2P11137 1827 aaKnown RBP29.75■■■□□ 2.35
SSPN-204ENST00000535504 EXOC5O00471 708 aa29.74■■■□□ 2.35
SSPN-204ENST00000535504 WNK3Q9BYP7 1800 aa29.73■■■□□ 2.35
SSPN-204ENST00000535504 HSP90AB2PQ58FF8 381 aa29.73■■■□□ 2.35
SSPN-204ENST00000535504 AMER1Q5JTC6 1135 aaPredicted RBP29.72■■■□□ 2.35
SSPN-204ENST00000535504 POLKQ9UBT6 870 aa29.71■■■□□ 2.35
SSPN-204ENST00000535504 CC2D1BQ5T0F9 858 aaKnown RBP29.7■■■□□ 2.35
SSPN-204ENST00000535504 PER1O15534 1290 aaPredicted RBP29.68■■■□□ 2.34
SSPN-204ENST00000535504 FAM182BQ5T319 152 aa29.68■■■□□ 2.34
SSPN-204ENST00000535504 LRRC37A3O60309 1634 aa29.67■■■□□ 2.34
SSPN-204ENST00000535504 OVOS2A0A0G2JMS6 1433 aa29.67■■■□□ 2.34
SSPN-204ENST00000535504 DISP2A7MBM2 1401 aa29.67■■■□□ 2.34
SSPN-204ENST00000535504 PEAK1Q9H792 1746 aa29.67■■■□□ 2.34
SSPN-204ENST00000535504 NPC1L1Q9UHC9 1359 aa29.66■■■□□ 2.34
SSPN-204ENST00000535504 CNGB1Q14028 1251 aaPredicted RBP29.66■■■□□ 2.34
SSPN-204ENST00000535504 RAPGEF4Q8WZA2 1011 aa29.66■■■□□ 2.34
SSPN-204ENST00000535504 TNS2Q63HR2 1409 aa29.64■■■□□ 2.34
SSPN-204ENST00000535504 BAG6P46379 1132 aa29.64■■■□□ 2.34
SSPN-204ENST00000535504 NBPF6Q5VWK0 638 aa29.62■■■□□ 2.33
SSPN-204ENST00000535504 NBPF4Q96M43 638 aa29.62■■■□□ 2.33
SSPN-204ENST00000535504 TATP17735 454 aaPredicted RBP29.61■■■□□ 2.33
SSPN-204ENST00000535504 RGPD1P0DJD0 1748 aa29.61■■■□□ 2.33
SSPN-204ENST00000535504 TRIM37O94972 964 aa29.59■■■□□ 2.33
SSPN-204ENST00000535504 USHBP1Q8N6Y0 703 aa29.59■■■□□ 2.33
SSPN-204ENST00000535504 RGPD2P0DJD1 1756 aa29.59■■■□□ 2.33
SSPN-204ENST00000535504 EIF4A2Q14240 407 aaKnown RBP29.55■■■□□ 2.32
SSPN-204ENST00000535504 MARCH10Q8NA82 808 aaPredicted RBP29.55■■■□□ 2.32
SSPN-204ENST00000535504 ZCRB1Q8TBF4 217 aaKnown RBP29.55■■■□□ 2.32
SSPN-204ENST00000535504 DDX54Q8TDD1 881 aaKnown RBP29.54■■■□□ 2.32
SSPN-204ENST00000535504 EP400Q96L91 3159 aa29.53■■■□□ 2.32
SSPN-204ENST00000535504 MTHFSP49914 203 aa29.53■■■□□ 2.32
SSPN-204ENST00000535504 EYA1Q99502 592 aa29.52■■■□□ 2.32
SSPN-204ENST00000535504 APBA3O96018 575 aa29.51■■■□□ 2.31
SSPN-204ENST00000535504 BCL9O00512 1426 aa29.5■■■□□ 2.31
SSPN-204ENST00000535504 MEGF6O75095 1541 aa29.5■■■□□ 2.31
SSPN-204ENST00000535504 DEFB132Q7Z7B7 95 aa29.49■■■□□ 2.31
SSPN-204ENST00000535504 CFAP53Q96M91 514 aa29.49■■■□□ 2.31
SSPN-204ENST00000535504 SPG7Q9UQ90 795 aa29.48■■■□□ 2.31
SSPN-204ENST00000535504 PCDH11XQ9BZA7 1347 aa29.47■■■□□ 2.31
SSPN-204ENST00000535504 PCDH11YQ9BZA8 1340 aa29.47■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms