RNA–Protein interactions for RNA: ENST00000533408.1

PTP4A2-215, Transcript of protein tyrosine phosphatase type IVA, member 2, human

TSL 3

Gene PTP4A2, Length 376 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTP4A2-215	ENST00000533408	SMG6	Q86US8	1419 aa	Known RBP	28.39	■■■□□ 2.14
PTP4A2-215	ENST00000533408	C8orf37	Q96NL8	207 aa		28.39	■■■□□ 2.14
PTP4A2-215	ENST00000533408	CHRNA2	Q15822	529 aa		28.38	■■■□□ 2.13
PTP4A2-215	ENST00000533408	COL14A1	Q05707	1796 aa	Known RBP	28.37	■■■□□ 2.13
PTP4A2-215	ENST00000533408	INSR	P06213	1382 aa		28.37	■■■□□ 2.13
PTP4A2-215	ENST00000533408	FNBP4	Q8N3X1	1017 aa	Predicted RBP	28.36	■■■□□ 2.13
PTP4A2-215	ENST00000533408	BTG4	Q9NY30	223 aa		28.36	■■■□□ 2.13
PTP4A2-215	ENST00000533408	CDK12	Q9NYV4	1490 aa	Predicted RBP	28.35	■■■□□ 2.13
PTP4A2-215	ENST00000533408	LRP6	O75581	1613 aa		28.35	■■■□□ 2.13
PTP4A2-215	ENST00000533408	NUDC	Q9Y266	331 aa		28.34	■■■□□ 2.13
PTP4A2-215	ENST00000533408	MAP2	P11137	1827 aa	Known RBP	28.33	■■■□□ 2.13
PTP4A2-215	ENST00000533408	CSB-PGBD3	P0DP91	1061 aa		28.32	■■■□□ 2.12
PTP4A2-215	ENST00000533408	HSP90AB2P	Q58FF8	381 aa		28.32	■■■□□ 2.12
PTP4A2-215	ENST00000533408	LTN1	O94822	1766 aa		28.32	■■■□□ 2.12
PTP4A2-215	ENST00000533408	DIAPH1	O60610	1272 aa	Known RBP	28.31	■■■□□ 2.12
PTP4A2-215	ENST00000533408	AXIN2	Q9Y2T1	843 aa		28.31	■■■□□ 2.12
PTP4A2-215	ENST00000533408	UNC5CL	Q8IV45	518 aa		28.3	■■■□□ 2.12
PTP4A2-215	ENST00000533408	ZNF772	Q68DY9	489 aa	Predicted RBP	28.29	■■■□□ 2.12
PTP4A2-215	ENST00000533408	ANKRD24	Q8TF21	1146 aa		28.29	■■■□□ 2.12
PTP4A2-215	ENST00000533408	USP21	Q9UK80	565 aa		28.29	■■■□□ 2.12
PTP4A2-215	ENST00000533408	SLIT2	O94813	1529 aa		28.28	■■■□□ 2.12
PTP4A2-215	ENST00000533408	ERBB3	P21860	1342 aa		28.27	■■■□□ 2.12
PTP4A2-215	ENST00000533408	AFF2	P51816	1311 aa		28.27	■■■□□ 2.12
PTP4A2-215	ENST00000533408	STRN4	Q9NRL3	753 aa		28.27	■■■□□ 2.12
PTP4A2-215	ENST00000533408	WDR17	Q8IZU2	1322 aa		28.26	■■■□□ 2.11
PTP4A2-215	ENST00000533408	CCER2	I3L3R5	266 aa		28.26	■■■□□ 2.11
PTP4A2-215	ENST00000533408	LTV1	Q96GA3	475 aa	Predicted RBP	28.26	■■■□□ 2.11
PTP4A2-215	ENST00000533408	CAMTA1	Q9Y6Y1	1673 aa		28.26	■■■□□ 2.11
PTP4A2-215	ENST00000533408	LMO7	Q8WWI1	1683 aa		28.25	■■■□□ 2.11
PTP4A2-215	ENST00000533408	COL18A1	P39060	1754 aa		28.24	■■■□□ 2.11
PTP4A2-215	ENST00000533408	NWD2	Q9ULI1	1742 aa		28.24	■■■□□ 2.11
PTP4A2-215	ENST00000533408	COL5A2	P05997	1499 aa	Predicted RBP	28.24	■■■□□ 2.11
PTP4A2-215	ENST00000533408	EIF4A2	Q14240	407 aa	Known RBP	28.24	■■■□□ 2.11
PTP4A2-215	ENST00000533408	TOM1L2	Q6ZVM7	507 aa		28.24	■■■□□ 2.11
PTP4A2-215	ENST00000533408	PHF23	Q9BUL5	403 aa	Predicted RBP	28.24	■■■□□ 2.11
PTP4A2-215	ENST00000533408	MRS2	Q9HD23	443 aa		28.23	■■■□□ 2.11
PTP4A2-215	ENST00000533408	NLRP2	Q9NX02	1062 aa		28.23	■■■□□ 2.11
PTP4A2-215	ENST00000533408	TRPC5	Q9UL62	973 aa	Predicted RBP	28.22	■■■□□ 2.11
PTP4A2-215	ENST00000533408	PEAK1	Q9H792	1746 aa		28.21	■■■□□ 2.11
PTP4A2-215	ENST00000533408	IL13	P35225	146 aa		28.21	■■■□□ 2.11
PTP4A2-215	ENST00000533408	VPS72	Q15906	364 aa		28.21	■■■□□ 2.11
PTP4A2-215	ENST00000533408	CARD10	Q9BWT7	1032 aa		28.2	■■■□□ 2.1
PTP4A2-215	ENST00000533408	PNN	Q9H307	717 aa	Known RBP	28.2	■■■□□ 2.1
PTP4A2-215	ENST00000533408	CCDC9	Q9Y3X0	531 aa	Known RBP	28.2	■■■□□ 2.1
PTP4A2-215	ENST00000533408	BCL9L	Q86UU0	1499 aa		28.2	■■■□□ 2.1
PTP4A2-215	ENST00000533408	PLCH1	Q4KWH8	1693 aa		28.19	■■■□□ 2.1
PTP4A2-215	ENST00000533408	CRB1	P82279	1406 aa		28.19	■■■□□ 2.1
PTP4A2-215	ENST00000533408	WDR43	Q15061	677 aa	Known RBP eCLIP	28.19	■■■□□ 2.1
PTP4A2-215	ENST00000533408	MIER1	Q8N108	512 aa		28.19	■■■□□ 2.1
PTP4A2-215	ENST00000533408	THRAP3	Q9Y2W1	955 aa	Known RBP	28.19	■■■□□ 2.1
PTP4A2-215	ENST00000533408	LARP1	Q6PKG0	1096 aa	Known RBP	28.18	■■■□□ 2.1
PTP4A2-215	ENST00000533408	U2SURP	O15042	1029 aa	Known RBP	28.17	■■■□□ 2.1
PTP4A2-215	ENST00000533408	QTRT2	Q9H974	415 aa	Known RBP	28.16	■■■□□ 2.1
PTP4A2-215	ENST00000533408	EYA1	Q99502	592 aa		28.15	■■■□□ 2.1
PTP4A2-215	ENST00000533408	CDCA7	Q9BWT1	371 aa	Predicted RBP	28.15	■■■□□ 2.1
PTP4A2-215	ENST00000533408	FAM208A	Q9UK61	1670 aa	Known RBP	28.15	■■■□□ 2.1
PTP4A2-215	ENST00000533408	U2AF1L5	P0DN76	240 aa	Predicted RBP	28.14	■■■□□ 2.1
PTP4A2-215	ENST00000533408	U2AF1	Q01081	240 aa	Known RBP eCLIP	28.14	■■■□□ 2.1
PTP4A2-215	ENST00000533408	NBPF6	Q5VWK0	638 aa		28.14	■■■□□ 2.1
PTP4A2-215	ENST00000533408	TCP11L2	Q8N4U5	519 aa		28.14	■■■□□ 2.1
PTP4A2-215	ENST00000533408	NBPF4	Q96M43	638 aa		28.14	■■■□□ 2.1
PTP4A2-215	ENST00000533408	SPATA31A5	Q5VU36	1347 aa		28.14	■■■□□ 2.09
PTP4A2-215	ENST00000533408	SPATA31A7	Q8IWB4	1347 aa		28.14	■■■□□ 2.09
PTP4A2-215	ENST00000533408	COL3A1	P02461	1466 aa	Predicted RBP	28.14	■■■□□ 2.09
PTP4A2-215	ENST00000533408	IGSF1	Q8N6C5	1336 aa		28.13	■■■□□ 2.09
PTP4A2-215	ENST00000533408	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	28.12	■■■□□ 2.09
PTP4A2-215	ENST00000533408	NEFM	P07197	916 aa		28.12	■■■□□ 2.09
PTP4A2-215	ENST00000533408	SPATA31A1	Q5TZJ5	1347 aa		28.12	■■■□□ 2.09
PTP4A2-215	ENST00000533408	FCHSD2	O94868	740 aa		28.11	■■■□□ 2.09
PTP4A2-215	ENST00000533408	RAPGEF4	Q8WZA2	1011 aa		28.11	■■■□□ 2.09
PTP4A2-215	ENST00000533408	GJD4	Q96KN9	370 aa	Predicted RBP	28.11	■■■□□ 2.09
PTP4A2-215	ENST00000533408	RGPD5	Q99666	1765 aa		28.1	■■■□□ 2.09
PTP4A2-215	ENST00000533408	ATRN	O75882	1429 aa		28.09	■■■□□ 2.09
PTP4A2-215	ENST00000533408	NRAP	Q86VF7	1730 aa		28.09	■■■□□ 2.09
PTP4A2-215	ENST00000533408	BARGIN	Q6ZT62	677 aa		28.09	■■■□□ 2.09
PTP4A2-215	ENST00000533408	USP35	Q9P2H5	1018 aa		28.09	■■■□□ 2.09
PTP4A2-215	ENST00000533408	SULT6B1	Q6IMI4	303 aa		28.08	■■■□□ 2.09
PTP4A2-215	ENST00000533408	PLEKHG2	Q9H7P9	1386 aa		28.08	■■■□□ 2.09
PTP4A2-215	ENST00000533408	RBM6	P78332	1123 aa	Known RBP	28.07	■■■□□ 2.08
PTP4A2-215	ENST00000533408	PNISR	Q8TF01	805 aa	Known RBP	28.07	■■■□□ 2.08
PTP4A2-215	ENST00000533408	IL2RB	P14784	551 aa		28.06	■■■□□ 2.08
PTP4A2-215	ENST00000533408	TAT	P17735	454 aa	Predicted RBP	28.05	■■■□□ 2.08
PTP4A2-215	ENST00000533408	KDR	P35968	1356 aa		28.05	■■■□□ 2.08
PTP4A2-215	ENST00000533408	RXRB	P28702	533 aa		28.04	■■■□□ 2.08
PTP4A2-215	ENST00000533408	CCDC184	Q52MB2	194 aa		28.04	■■■□□ 2.08
PTP4A2-215	ENST00000533408	NCAPD2	Q15021	1401 aa		28.03	■■■□□ 2.08
PTP4A2-215	ENST00000533408	HMOX1	P09601	288 aa		28.02	■■■□□ 2.08
PTP4A2-215	ENST00000533408	USHBP1	Q8N6Y0	703 aa		28.02	■■■□□ 2.08
PTP4A2-215	ENST00000533408	AMOT	Q4VCS5	1084 aa		28.01	■■■□□ 2.07
PTP4A2-215	ENST00000533408	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	28.01	■■■□□ 2.07
PTP4A2-215	ENST00000533408	ADAMTS8	Q9UP79	889 aa		28.01	■■■□□ 2.07
PTP4A2-215	ENST00000533408	ONECUT3	O60422	494 aa	Predicted RBP	28	■■■□□ 2.07
PTP4A2-215	ENST00000533408	SPG7	Q9UQ90	795 aa		28	■■■□□ 2.07
PTP4A2-215	ENST00000533408	PLEKHO1	Q53GL0	409 aa	Predicted RBP	27.99	■■■□□ 2.07
PTP4A2-215	ENST00000533408	RGPD1	P0DJD0	1748 aa		27.98	■■■□□ 2.07
PTP4A2-215	ENST00000533408	MAPK8IP3	Q9UPT6	1336 aa		27.98	■■■□□ 2.07
PTP4A2-215	ENST00000533408	FAM98C	Q17RN3	349 aa	Known RBP	27.98	■■■□□ 2.07
PTP4A2-215	ENST00000533408	RSPH6A	Q9H0K4	717 aa		27.98	■■■□□ 2.07
PTP4A2-215	ENST00000533408	RGS17	Q9UGC6	210 aa	Predicted RBP	27.98	■■■□□ 2.07
PTP4A2-215	ENST00000533408		A0A0G2JS52	829 aa		27.97	■■■□□ 2.07

Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms