RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 MAP2P11137 1827 aaKnown RBP19.35■□□□□ 0.69
COL16A1-217ENST00000532877 SOX12O15370 315 aa19.35■□□□□ 0.69
COL16A1-217ENST00000532877 GJD4Q96KN9 370 aaPredicted RBP19.35■□□□□ 0.69
COL16A1-217ENST00000532877 SMG6Q86US8 1419 aaKnown RBP19.34■□□□□ 0.69
COL16A1-217ENST00000532877 PLEKHG5O94827 1062 aa19.34■□□□□ 0.69
COL16A1-217ENST00000532877 FBLN1P23142 703 aa19.34■□□□□ 0.69
COL16A1-217ENST00000532877 LTN1O94822 1766 aa19.34■□□□□ 0.69
COL16A1-217ENST00000532877 KCNH5Q8NCM2 988 aa19.33■□□□□ 0.68
COL16A1-217ENST00000532877 PEAK1Q9H792 1746 aa19.32■□□□□ 0.68
COL16A1-217ENST00000532877 GCP02774 474 aa19.32■□□□□ 0.68
COL16A1-217ENST00000532877 CABLES1Q8TDN4 633 aa19.32■□□□□ 0.68
COL16A1-217ENST00000532877 RRS1Q15050 365 aaKnown RBP19.31■□□□□ 0.68
COL16A1-217ENST00000532877 POLKQ9UBT6 870 aa19.3■□□□□ 0.68
COL16A1-217ENST00000532877 MAP3K19Q56UN5 1328 aa19.29■□□□□ 0.68
COL16A1-217ENST00000532877 EMILIN1Q9Y6C2 1016 aa19.29■□□□□ 0.68
COL16A1-217ENST00000532877 CCER2I3L3R5 266 aa19.28■□□□□ 0.68
COL16A1-217ENST00000532877 MTHFSP49914 203 aa19.28■□□□□ 0.68
COL16A1-217ENST00000532877 CPDO75976 1380 aa19.27■□□□□ 0.68
COL16A1-217ENST00000532877 NWD2Q9ULI1 1742 aa19.26■□□□□ 0.67
COL16A1-217ENST00000532877 CCDC184Q52MB2 194 aa19.26■□□□□ 0.67
COL16A1-217ENST00000532877 DEFB132Q7Z7B7 95 aa19.26■□□□□ 0.67
COL16A1-217ENST00000532877 ARHGEF25Q86VW2 580 aa19.26■□□□□ 0.67
COL16A1-217ENST00000532877 RTL1A6NKG5 1358 aa19.26■□□□□ 0.67
COL16A1-217ENST00000532877 COL3A1P02461 1466 aaPredicted RBP19.26■□□□□ 0.67
COL16A1-217ENST00000532877 FLT4P35916 1363 aa19.25■□□□□ 0.67
COL16A1-217ENST00000532877 KIF24Q5T7B8 1368 aa19.25■□□□□ 0.67
COL16A1-217ENST00000532877 KIAA0232Q92628 1395 aa19.25■□□□□ 0.67
COL16A1-217ENST00000532877 PPM1GO15355 546 aaPredicted RBP19.25■□□□□ 0.67
COL16A1-217ENST00000532877 HAP1P54257 671 aaPredicted RBP19.25■□□□□ 0.67
COL16A1-217ENST00000532877 UNC5CLQ8IV45 518 aa19.25■□□□□ 0.67
COL16A1-217ENST00000532877 ABCC6O95255 1503 aa19.25■□□□□ 0.67
COL16A1-217ENST00000532877 PLCH1Q4KWH8 1693 aa19.24■□□□□ 0.67
COL16A1-217ENST00000532877 ZC3H6P61129 1189 aaKnown RBP19.24■□□□□ 0.67
COL16A1-217ENST00000532877 MRS2Q9HD23 443 aa19.24■□□□□ 0.67
COL16A1-217ENST00000532877 COL18A1P39060 1754 aa19.24■□□□□ 0.67
COL16A1-217ENST00000532877 INSRP06213 1382 aa19.23■□□□□ 0.67
COL16A1-217ENST00000532877 ONECUT3O60422 494 aaPredicted RBP19.23■□□□□ 0.67
COL16A1-217ENST00000532877 ZBTB7CA1YPR0 619 aa19.22■□□□□ 0.67
COL16A1-217ENST00000532877 AMPHP49418 695 aa19.22■□□□□ 0.67
COL16A1-217ENST00000532877 CFAP53Q96M91 514 aa19.22■□□□□ 0.67
COL16A1-217ENST00000532877 LMO7Q8WWI1 1683 aa19.21■□□□□ 0.67
COL16A1-217ENST00000532877 HOXC9P31274 260 aa19.21■□□□□ 0.67
COL16A1-217ENST00000532877 RGPD5Q99666 1765 aa19.2■□□□□ 0.66
COL16A1-217ENST00000532877 IP6K1Q92551 441 aa19.2■□□□□ 0.66
COL16A1-217ENST00000532877 PRDM11Q9NQV5 511 aa19.2■□□□□ 0.66
COL16A1-217ENST00000532877 COL14A1Q05707 1796 aaKnown RBP19.19■□□□□ 0.66
COL16A1-217ENST00000532877 HSP90AB2PQ58FF8 381 aa19.19■□□□□ 0.66
COL16A1-217ENST00000532877 NRAPQ86VF7 1730 aa19.18■□□□□ 0.66
COL16A1-217ENST00000532877 CHRNA2Q15822 529 aa19.18■□□□□ 0.66
COL16A1-217ENST00000532877 SEPT12Q8IYM1 358 aa19.17■□□□□ 0.66
COL16A1-217ENST00000532877 VPS72Q15906 364 aa19.16■□□□□ 0.66
COL16A1-217ENST00000532877 AXIN2Q9Y2T1 843 aa19.16■□□□□ 0.66
COL16A1-217ENST00000532877 CAMTA1Q9Y6Y1 1673 aa19.15■□□□□ 0.66
COL16A1-217ENST00000532877 RGPD1P0DJD0 1748 aa19.15■□□□□ 0.66
COL16A1-217ENST00000532877 DIAPH1O60610 1272 aaKnown RBP19.15■□□□□ 0.66
COL16A1-217ENST00000532877 EIF4A2Q14240 407 aaKnown RBP19.15■□□□□ 0.66
COL16A1-217ENST00000532877 FAM83GA6ND36 823 aa19.14■□□□□ 0.65
COL16A1-217ENST00000532877 IL13P35225 146 aa19.14■□□□□ 0.65
COL16A1-217ENST00000532877 PNISRQ8TF01 805 aaKnown RBP19.13■□□□□ 0.65
COL16A1-217ENST00000532877 COL5A2P05997 1499 aaPredicted RBP19.13■□□□□ 0.65
COL16A1-217ENST00000532877 FAM208AQ9UK61 1670 aaKnown RBP19.13■□□□□ 0.65
COL16A1-217ENST00000532877 TNS1Q9HBL0 1735 aaKnown RBP19.13■□□□□ 0.65
COL16A1-217ENST00000532877 ERBB3P21860 1342 aa19.12■□□□□ 0.65
COL16A1-217ENST00000532877 RGPD2P0DJD1 1756 aa19.11■□□□□ 0.65
COL16A1-217ENST00000532877 WDR43Q15061 677 aaKnown RBP eCLIP19.11■□□□□ 0.65
COL16A1-217ENST00000532877 ANKRD24Q8TF21 1146 aa19.11■□□□□ 0.65
COL16A1-217ENST00000532877 LTV1Q96GA3 475 aaPredicted RBP19.11■□□□□ 0.65
COL16A1-217ENST00000532877 NUDCQ9Y266 331 aa19.11■□□□□ 0.65
COL16A1-217ENST00000532877 DISP2A7MBM2 1401 aa19.1■□□□□ 0.65
COL16A1-217ENST00000532877 KRT27Q7Z3Y8 459 aa19.1■□□□□ 0.65
COL16A1-217ENST00000532877 PSDA5PKW4 1024 aaPredicted RBP19.09■□□□□ 0.65
COL16A1-217ENST00000532877 U2SURPO15042 1029 aaKnown RBP19.09■□□□□ 0.65
COL16A1-217ENST00000532877 SF3B2Q13435 895 aaKnown RBP19.09■□□□□ 0.65
COL16A1-217ENST00000532877 FAM9BQ8IZU0 186 aa19.09■□□□□ 0.65
COL16A1-217ENST00000532877 BTG4Q9NY30 223 aa19.08■□□□□ 0.64
COL16A1-217ENST00000532877 THSD7AQ9UPZ6 1657 aa19.08■□□□□ 0.64
COL16A1-217ENST00000532877 IGSF1Q8N6C5 1336 aa19.07■□□□□ 0.64
COL16A1-217ENST00000532877 U2AF1L5P0DN76 240 aaPredicted RBP19.07■□□□□ 0.64
COL16A1-217ENST00000532877 U2AF1Q01081 240 aaKnown RBP eCLIP19.07■□□□□ 0.64
COL16A1-217ENST00000532877 WDR17Q8IZU2 1322 aa19.06■□□□□ 0.64
COL16A1-217ENST00000532877 EYA1Q99502 592 aa19.06■□□□□ 0.64
COL16A1-217ENST00000532877 ADAMTS8Q9UP79 889 aa19.06■□□□□ 0.64
COL16A1-217ENST00000532877 NCAPD2Q15021 1401 aa19.06■□□□□ 0.64
COL16A1-217ENST00000532877 CSB-PGBD3P0DP91 1061 aa19.05■□□□□ 0.64
COL16A1-217ENST00000532877 STRN4Q9NRL3 753 aa19.05■□□□□ 0.64
COL16A1-217ENST00000532877 BAG6P46379 1132 aa19.04■□□□□ 0.64
COL16A1-217ENST00000532877 NBPF6Q5VWK0 638 aa19.04■□□□□ 0.64
COL16A1-217ENST00000532877 NBPF4Q96M43 638 aa19.04■□□□□ 0.64
COL16A1-217ENST00000532877 KDRP35968 1356 aa19.04■□□□□ 0.64
COL16A1-217ENST00000532877 AEBP1Q8IUX7 1158 aa19.03■□□□□ 0.64
COL16A1-217ENST00000532877 CRB1P82279 1406 aa19.02■□□□□ 0.64
COL16A1-217ENST00000532877 HMOX1P09601 288 aa19.02■□□□□ 0.64
COL16A1-217ENST00000532877 EVA1CP58658 441 aa19.02■□□□□ 0.64
COL16A1-217ENST00000532877 SULT6B1Q6IMI4 303 aa19.02■□□□□ 0.64
COL16A1-217ENST00000532877 USHBP1Q8N6Y0 703 aa19.02■□□□□ 0.64
COL16A1-217ENST00000532877 NLRP2Q9NX02 1062 aa19.02■□□□□ 0.64
COL16A1-217ENST00000532877 LARP1Q6PKG0 1096 aaKnown RBP19.01■□□□□ 0.63
COL16A1-217ENST00000532877 RSPH6AQ9H0K4 717 aa19.01■□□□□ 0.63
COL16A1-217ENST00000532877 RREB1Q92766 1687 aa19.01■□□□□ 0.63
COL16A1-217ENST00000532877 FCHSD2O94868 740 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms