RNA–Protein interactions for RNA: ENST00000532453.1

AF131215.3-201, humanhuman

TSL 1 (best) BASIC

Gene AF131215.3, Length 639 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AF131215.3-201ENST00000532453 ONECUT3O60422 494 aaPredicted RBP23.17■■□□□ 1.3
AF131215.3-201ENST00000532453 FAM98CQ17RN3 349 aaKnown RBP23.16■■□□□ 1.3
AF131215.3-201ENST00000532453 USP35Q9P2H5 1018 aa23.16■■□□□ 1.3
AF131215.3-201ENST00000532453 SPATA31A1Q5TZJ5 1347 aa23.15■■□□□ 1.3
AF131215.3-201ENST00000532453 SEPT12Q8IYM1 358 aa23.15■■□□□ 1.3
AF131215.3-201ENST00000532453 COL18A1P39060 1754 aa23.14■■□□□ 1.3
AF131215.3-201ENST00000532453 CGNL1Q0VF96 1302 aa23.13■■□□□ 1.29
AF131215.3-201ENST00000532453 WASHC2AQ641Q2 1341 aa23.13■■□□□ 1.29
AF131215.3-201ENST00000532453 COL5A2P05997 1499 aaPredicted RBP23.13■■□□□ 1.29
AF131215.3-201ENST00000532453 CCDC7Q96M83 1385 aa23.12■■□□□ 1.29
AF131215.3-201ENST00000532453 A0A0G2JS52 829 aa23.11■■□□□ 1.29
AF131215.3-201ENST00000532453 MYT1Q01538 1121 aa23.11■■□□□ 1.29
AF131215.3-201ENST00000532453 RRS1Q15050 365 aaKnown RBP23.1■■□□□ 1.29
AF131215.3-201ENST00000532453 TOM1L2Q6ZVM7 507 aa23.1■■□□□ 1.29
AF131215.3-201ENST00000532453 MAP3K19Q56UN5 1328 aa23.09■■□□□ 1.29
AF131215.3-201ENST00000532453 CSB-PGBD3P0DP91 1061 aa23.09■■□□□ 1.29
AF131215.3-201ENST00000532453 IP6K1Q92551 441 aa23.09■■□□□ 1.29
AF131215.3-201ENST00000532453 WDR17Q8IZU2 1322 aa23.08■■□□□ 1.29
AF131215.3-201ENST00000532453 KIF20BQ96Q89 1820 aa23.08■■□□□ 1.29
AF131215.3-201ENST00000532453 AMPHP49418 695 aa23.08■■□□□ 1.29
AF131215.3-201ENST00000532453 TCP11L2Q8N4U5 519 aa23.08■■□□□ 1.29
AF131215.3-201ENST00000532453 RGPD5Q99666 1765 aa23.07■■□□□ 1.28
AF131215.3-201ENST00000532453 KNSTRNQ9Y448 316 aa23.07■■□□□ 1.28
AF131215.3-201ENST00000532453 CRB1P82279 1406 aa23.07■■□□□ 1.28
AF131215.3-201ENST00000532453 LTN1O94822 1766 aa23.06■■□□□ 1.28
AF131215.3-201ENST00000532453 BARGINQ6ZT62 677 aa23.06■■□□□ 1.28
AF131215.3-201ENST00000532453 HOXC9P31274 260 aa23.05■■□□□ 1.28
AF131215.3-201ENST00000532453 ANKRD24Q8TF21 1146 aa23.05■■□□□ 1.28
AF131215.3-201ENST00000532453 THRAP3Q9Y2W1 955 aaKnown RBP23.05■■□□□ 1.28
AF131215.3-201ENST00000532453 ZEB1P37275 1124 aaPredicted RBP23.04■■□□□ 1.28
AF131215.3-201ENST00000532453 KRT27Q7Z3Y8 459 aa23.04■■□□□ 1.28
AF131215.3-201ENST00000532453 UPF1Q92900 1129 aaKnown RBP eCLIP23.04■■□□□ 1.28
AF131215.3-201ENST00000532453 LTV1Q96GA3 475 aaPredicted RBP23.04■■□□□ 1.28
AF131215.3-201ENST00000532453 PER1O15534 1290 aaPredicted RBP23.03■■□□□ 1.28
AF131215.3-201ENST00000532453 TNNT2P45379 298 aaPredicted RBP23.03■■□□□ 1.28
AF131215.3-201ENST00000532453 CARD10Q9BWT7 1032 aa23.03■■□□□ 1.28
AF131215.3-201ENST00000532453 ABCC6O95255 1503 aa23.03■■□□□ 1.28
AF131215.3-201ENST00000532453 NLRP2Q9NX02 1062 aa23.02■■□□□ 1.28
AF131215.3-201ENST00000532453 ERBB3P21860 1342 aa23.02■■□□□ 1.28
AF131215.3-201ENST00000532453 EMILIN1Q9Y6C2 1016 aa23.01■■□□□ 1.27
AF131215.3-201ENST00000532453 BRWD3Q6RI45 1802 aa23.01■■□□□ 1.27
AF131215.3-201ENST00000532453 AMER1Q5JTC6 1135 aaPredicted RBP23■■□□□ 1.27
AF131215.3-201ENST00000532453 BLMP54132 1417 aaPredicted RBP22.99■■□□□ 1.27
AF131215.3-201ENST00000532453 PPM1GO15355 546 aaPredicted RBP22.99■■□□□ 1.27
AF131215.3-201ENST00000532453 HSP90AB2PQ58FF8 381 aa22.99■■□□□ 1.27
AF131215.3-201ENST00000532453 MORC1Q86VD1 984 aa22.99■■□□□ 1.27
AF131215.3-201ENST00000532453 FAM182BQ5T319 152 aa22.98■■□□□ 1.27
AF131215.3-201ENST00000532453 POLKQ9UBT6 870 aa22.98■■□□□ 1.27
AF131215.3-201ENST00000532453 THSD7AQ9UPZ6 1657 aa22.97■■□□□ 1.27
AF131215.3-201ENST00000532453 NSD2O96028 1365 aa22.97■■□□□ 1.27
AF131215.3-201ENST00000532453 RTL1A6NKG5 1358 aa22.96■■□□□ 1.27
AF131215.3-201ENST00000532453 PDE3BQ13370 1112 aa22.95■■□□□ 1.26
AF131215.3-201ENST00000532453 CNGB1Q14028 1251 aaPredicted RBP22.94■■□□□ 1.26
AF131215.3-201ENST00000532453 CC2D1BQ5T0F9 858 aaKnown RBP22.94■■□□□ 1.26
AF131215.3-201ENST00000532453 INSRP06213 1382 aa22.93■■□□□ 1.26
AF131215.3-201ENST00000532453 FLT4P35916 1363 aa22.93■■□□□ 1.26
AF131215.3-201ENST00000532453 KIF24Q5T7B8 1368 aa22.93■■□□□ 1.26
AF131215.3-201ENST00000532453 CDCA7Q9BWT1 371 aaPredicted RBP22.93■■□□□ 1.26
AF131215.3-201ENST00000532453 PEAK1Q9H792 1746 aa22.93■■□□□ 1.26
AF131215.3-201ENST00000532453 ANKRD26Q9UPS8 1709 aa22.92■■□□□ 1.26
AF131215.3-201ENST00000532453 DDB1Q16531 1140 aa22.92■■□□□ 1.26
AF131215.3-201ENST00000532453 NBPF6Q5VWK0 638 aa22.91■■□□□ 1.26
AF131215.3-201ENST00000532453 NBPF4Q96M43 638 aa22.91■■□□□ 1.26
AF131215.3-201ENST00000532453 MAP2P11137 1827 aaKnown RBP22.9■■□□□ 1.26
AF131215.3-201ENST00000532453 EXOC5O00471 708 aa22.89■■□□□ 1.25
AF131215.3-201ENST00000532453 IL2RBP14784 551 aa22.89■■□□□ 1.25
AF131215.3-201ENST00000532453 DISP2A7MBM2 1401 aa22.89■■□□□ 1.25
AF131215.3-201ENST00000532453 USHBP1Q8N6Y0 703 aa22.88■■□□□ 1.25
AF131215.3-201ENST00000532453 FAM196AQ6ZSG2 479 aa22.87■■□□□ 1.25
AF131215.3-201ENST00000532453 CCDC125Q86Z20 511 aa22.87■■□□□ 1.25
AF131215.3-201ENST00000532453 PARP4Q9UKK3 1724 aaKnown RBP22.86■■□□□ 1.25
AF131215.3-201ENST00000532453 SMG6Q86US8 1419 aaKnown RBP22.86■■□□□ 1.25
AF131215.3-201ENST00000532453 MARCH10Q8NA82 808 aaPredicted RBP22.85■■□□□ 1.25
AF131215.3-201ENST00000532453 RGPD2P0DJD1 1756 aa22.84■■□□□ 1.25
AF131215.3-201ENST00000532453 NPC1L1Q9UHC9 1359 aa22.84■■□□□ 1.25
AF131215.3-201ENST00000532453 EIF4A2Q14240 407 aaKnown RBP22.83■■□□□ 1.25
AF131215.3-201ENST00000532453 LRRC37A3O60309 1634 aa22.82■■□□□ 1.24
AF131215.3-201ENST00000532453 FAM208AQ9UK61 1670 aaKnown RBP22.82■■□□□ 1.24
AF131215.3-201ENST00000532453 EP400Q96L91 3159 aa22.82■■□□□ 1.24
AF131215.3-201ENST00000532453 WNK3Q9BYP7 1800 aa22.82■■□□□ 1.24
AF131215.3-201ENST00000532453 TRIM37O94972 964 aa22.81■■□□□ 1.24
AF131215.3-201ENST00000532453 MTHFSP49914 203 aa22.81■■□□□ 1.24
AF131215.3-201ENST00000532453 DDX10Q13206 875 aaKnown RBP22.81■■□□□ 1.24
AF131215.3-201ENST00000532453 SF3B2Q13435 895 aaKnown RBP22.81■■□□□ 1.24
AF131215.3-201ENST00000532453 EYA1Q99502 592 aa22.81■■□□□ 1.24
AF131215.3-201ENST00000532453 DEFB132Q7Z7B7 95 aa22.78■■□□□ 1.24
AF131215.3-201ENST00000532453 DDX54Q8TDD1 881 aaKnown RBP22.78■■□□□ 1.24
AF131215.3-201ENST00000532453 RAPGEF4Q8WZA2 1011 aa22.78■■□□□ 1.24
AF131215.3-201ENST00000532453 TNS2Q63HR2 1409 aa22.77■■□□□ 1.24
AF131215.3-201ENST00000532453 ZCRB1Q8TBF4 217 aaKnown RBP22.77■■□□□ 1.24
AF131215.3-201ENST00000532453 OVOS2A0A0G2JMS6 1433 aa22.76■■□□□ 1.23
AF131215.3-201ENST00000532453 TATP17735 454 aaPredicted RBP22.76■■□□□ 1.23
AF131215.3-201ENST00000532453 MEGF6O75095 1541 aa22.76■■□□□ 1.23
AF131215.3-201ENST00000532453 IL13P35225 146 aa22.73■■□□□ 1.23
AF131215.3-201ENST00000532453 PTF1AQ7RTS3 328 aa22.73■■□□□ 1.23
AF131215.3-201ENST00000532453 APBA3O96018 575 aa22.72■■□□□ 1.23
AF131215.3-201ENST00000532453 BAG6P46379 1132 aa22.72■■□□□ 1.23
AF131215.3-201ENST00000532453 EN1Q05925 392 aaPredicted RBP22.72■■□□□ 1.23
AF131215.3-201ENST00000532453 NCAPD2Q15021 1401 aa22.71■■□□□ 1.23
AF131215.3-201ENST00000532453 PPP2R1AP30153 589 aa22.7■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms