RNA–Protein interactions for RNA: ENST00000530309.1

CASP4-208, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 481 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-208ENST00000530309 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.25□□□□□ -0.61
CASP4-208ENST00000530309 A0A0G2JS52 829 aa11.25□□□□□ -0.61
CASP4-208ENST00000530309 GIGYF1O75420 1035 aaPredicted RBP11.25□□□□□ -0.61
CASP4-208ENST00000530309 ACIN1Q9UKV3 1341 aaKnown RBP11.25□□□□□ -0.61
CASP4-208ENST00000530309 USP17L5A8MUK1 530 aa11.24□□□□□ -0.61
CASP4-208ENST00000530309 RNF20Q5VTR2 975 aa11.24□□□□□ -0.61
CASP4-208ENST00000530309 PLPP7Q8NBV4 271 aa11.24□□□□□ -0.61
CASP4-208ENST00000530309 CHIC2Q9UKJ5 165 aa11.24□□□□□ -0.61
CASP4-208ENST00000530309 MAP7D1Q3KQU3 841 aa11.23□□□□□ -0.61
CASP4-208ENST00000530309 PLEKHM2Q8IWE5 1019 aa11.23□□□□□ -0.61
CASP4-208ENST00000530309 USP17L3A6NCW0 530 aa11.22□□□□□ -0.61
CASP4-208ENST00000530309 USP17L4A6NCW7 530 aa11.22□□□□□ -0.61
CASP4-208ENST00000530309 ESPNB1AK53 854 aa11.22□□□□□ -0.61
CASP4-208ENST00000530309 SPRYD7Q5W111 196 aa11.22□□□□□ -0.61
CASP4-208ENST00000530309 USP17L2Q6R6M4 530 aa11.22□□□□□ -0.61
CASP4-208ENST00000530309 USP17L1Q7RTZ2 530 aa11.22□□□□□ -0.61
CASP4-208ENST00000530309 MAP4K5Q9Y4K4 846 aa11.22□□□□□ -0.61
CASP4-208ENST00000530309 LZTS3O60299 673 aaPredicted RBP11.21□□□□□ -0.61
CASP4-208ENST00000530309 VASH1Q7L8A9 365 aaPredicted RBP11.21□□□□□ -0.61
CASP4-208ENST00000530309 SEPT12Q8IYM1 358 aa11.21□□□□□ -0.61
CASP4-208ENST00000530309 DEPDC4Q8N2C3 294 aa11.21□□□□□ -0.61
CASP4-208ENST00000530309 KCTD15Q96SI1 283 aaPredicted RBP11.21□□□□□ -0.61
CASP4-208ENST00000530309 WNT7AO00755 349 aa11.2□□□□□ -0.62
CASP4-208ENST00000530309 TSGA10IPQ3SY00 556 aa11.2□□□□□ -0.62
CASP4-208ENST00000530309 KANK4Q5T7N3 995 aaPredicted RBP11.2□□□□□ -0.62
CASP4-208ENST00000530309 CCDC125Q86Z20 511 aa11.2□□□□□ -0.62
CASP4-208ENST00000530309 CCDC85AQ96PX6 553 aaPredicted RBP11.2□□□□□ -0.62
CASP4-208ENST00000530309 CDK15Q96Q40 435 aa11.2□□□□□ -0.62
CASP4-208ENST00000530309 VRTNQ9H8Y1 702 aa11.2□□□□□ -0.62
CASP4-208ENST00000530309 SIAH2O43255 324 aa11.19□□□□□ -0.62
CASP4-208ENST00000530309 NCOA4Q13772 614 aa11.19□□□□□ -0.62
CASP4-208ENST00000530309 CDCA8Q53HL2 280 aa11.19□□□□□ -0.62
CASP4-208ENST00000530309 MPNDQ8N594 471 aa11.19□□□□□ -0.62
CASP4-208ENST00000530309 DOLKQ9UPQ8 538 aa11.19□□□□□ -0.62
CASP4-208ENST00000530309 ARID5BQ14865 1188 aa11.18□□□□□ -0.62
CASP4-208ENST00000530309 TRAF7Q6Q0C0 670 aa11.18□□□□□ -0.62
CASP4-208ENST00000530309 ZNF598Q86UK7 904 aaKnown RBP11.17□□□□□ -0.62
CASP4-208ENST00000530309 MRGPRX2Q96LB1 330 aa11.17□□□□□ -0.62
CASP4-208ENST00000530309 PRKD2Q9BZL6 878 aa11.17□□□□□ -0.62
CASP4-208ENST00000530309 ATG7O95352 703 aa11.16□□□□□ -0.62
CASP4-208ENST00000530309 EML3Q32P44 896 aa11.16□□□□□ -0.62
CASP4-208ENST00000530309 INTS6LQ5JSJ4 861 aaKnown RBP11.16□□□□□ -0.62
CASP4-208ENST00000530309 ZNF697Q5TEC3 545 aa11.16□□□□□ -0.62
CASP4-208ENST00000530309 RETREG2Q8NC44 543 aa11.16□□□□□ -0.62
CASP4-208ENST00000530309 MKRN1Q9UHC7 482 aaKnown RBP11.16□□□□□ -0.62
CASP4-208ENST00000530309 TLL2Q9Y6L7 1015 aa11.16□□□□□ -0.62
CASP4-208ENST00000530309 V9GY48 417 aaPredicted RBP11.16□□□□□ -0.62
CASP4-208ENST00000530309 GRM5P41594 1212 aa11.15□□□□□ -0.62
CASP4-208ENST00000530309 ATP5J2-PTCD1G3V325 749 aa11.14□□□□□ -0.63
CASP4-208ENST00000530309 PDIA4P13667 645 aaKnown RBP11.14□□□□□ -0.63
CASP4-208ENST00000530309 RAB15P59190 212 aa11.14□□□□□ -0.63
CASP4-208ENST00000530309 PCDHB11Q9Y5F2 797 aa11.14□□□□□ -0.63
CASP4-208ENST00000530309 OXLD1Q5BKU9 147 aa11.13□□□□□ -0.63
CASP4-208ENST00000530309 CDCA7Q9BWT1 371 aaPredicted RBP11.13□□□□□ -0.63
CASP4-208ENST00000530309 NOD1Q9Y239 953 aa11.13□□□□□ -0.63
CASP4-208ENST00000530309 ERVH48-1M5A8F1 160 aa11.12□□□□□ -0.63
CASP4-208ENST00000530309 ADH1CP00326 375 aa11.12□□□□□ -0.63
CASP4-208ENST00000530309 FSHRP23945 695 aa11.12□□□□□ -0.63
CASP4-208ENST00000530309 FOXC1Q12948 553 aa11.12□□□□□ -0.63
CASP4-208ENST00000530309 CSB-PGBD3P0DP91 1061 aa11.11□□□□□ -0.63
CASP4-208ENST00000530309 PDE4CQ08493 712 aa11.11□□□□□ -0.63
CASP4-208ENST00000530309 USP4Q13107 963 aa11.11□□□□□ -0.63
CASP4-208ENST00000530309 NR5A1Q13285 461 aa11.11□□□□□ -0.63
CASP4-208ENST00000530309 LARP1Q6PKG0 1096 aaKnown RBP11.11□□□□□ -0.63
CASP4-208ENST00000530309 TRIM50Q86XT4 487 aa11.11□□□□□ -0.63
CASP4-208ENST00000530309 SIRT1Q96EB6 747 aa11.11□□□□□ -0.63
CASP4-208ENST00000530309 PKD2L1Q9P0L9 805 aa11.11□□□□□ -0.63
CASP4-208ENST00000530309 FAM196BA6NMK8 535 aa11.1□□□□□ -0.63
CASP4-208ENST00000530309 RASA1P20936 1047 aa11.1□□□□□ -0.63
CASP4-208ENST00000530309 DHX9Q08211 1270 aaKnown RBP11.1□□□□□ -0.63
CASP4-208ENST00000530309 ELOAQ14241 798 aaKnown RBP11.09□□□□□ -0.63
CASP4-208ENST00000530309 CRTC2Q53ET0 693 aaPredicted RBP11.09□□□□□ -0.63
CASP4-208ENST00000530309 TRAIPQ9BWF2 469 aa11.09□□□□□ -0.63
CASP4-208ENST00000530309 ATP1A2P50993 1020 aa11.08□□□□□ -0.64
CASP4-208ENST00000530309 OGFOD1Q8N543 542 aa11.08□□□□□ -0.64
CASP4-208ENST00000530309 TRIM52Q96A61 297 aa11.08□□□□□ -0.64
CASP4-208ENST00000530309 USTQ9Y2C2 406 aa11.08□□□□□ -0.64
CASP4-208ENST00000530309 USP17L15C9J2P7 530 aa11.07□□□□□ -0.64
CASP4-208ENST00000530309 USP17L10C9JJH3 530 aa11.07□□□□□ -0.64
CASP4-208ENST00000530309 USP17L13C9JLJ4 530 aa11.07□□□□□ -0.64
CASP4-208ENST00000530309 USP17L12C9JPN9 530 aa11.07□□□□□ -0.64
CASP4-208ENST00000530309 USP17L11C9JVI0 530 aa11.07□□□□□ -0.64
CASP4-208ENST00000530309 USP17L21D6R901 530 aa11.07□□□□□ -0.64
CASP4-208ENST00000530309 USP17L18D6R9N7 530 aa11.07□□□□□ -0.64
CASP4-208ENST00000530309 USP17L22D6RA61 530 aa11.07□□□□□ -0.64
CASP4-208ENST00000530309 USP17L17D6RBQ6 530 aa11.07□□□□□ -0.64
CASP4-208ENST00000530309 USP17L19D6RCP7 530 aa11.07□□□□□ -0.64
CASP4-208ENST00000530309 USP17L20D6RJB6 530 aa11.07□□□□□ -0.64
CASP4-208ENST00000530309 ALDH1A1P00352 501 aa11.07□□□□□ -0.64
CASP4-208ENST00000530309 CLDN10P78369 228 aa11.07□□□□□ -0.64
CASP4-208ENST00000530309 USP17L24Q0WX57 530 aa11.07□□□□□ -0.64
CASP4-208ENST00000530309 PTK7Q13308 1070 aa11.07□□□□□ -0.64
CASP4-208ENST00000530309 CCDC116Q8IYX3 515 aa11.07□□□□□ -0.64
CASP4-208ENST00000530309 SNIP1Q8TAD8 396 aaKnown RBP11.07□□□□□ -0.64
CASP4-208ENST00000530309 DNAAF2Q9NVR5 837 aaKnown RBP11.07□□□□□ -0.64
CASP4-208ENST00000530309 NOVA2Q9UNW9 492 aaKnown RBP11.07□□□□□ -0.64
CASP4-208ENST00000530309 MYCP01106 439 aaPredicted RBP11.06□□□□□ -0.64
CASP4-208ENST00000530309 GTF2IP78347 998 aa11.06□□□□□ -0.64
CASP4-208ENST00000530309 LARGE2Q8N3Y3 721 aa11.06□□□□□ -0.64
CASP4-208ENST00000530309 GDF9O60383 454 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms