RNA–Protein interactions for RNA: ENST00000529386.5

CMTM1-212, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 924 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-212ENST00000529386 BLMP54132 1417 aaPredicted RBP19.02■□□□□ 0.64
CMTM1-212ENST00000529386 ANP32CO43423 234 aa19.02■□□□□ 0.64
CMTM1-212ENST00000529386 UNC5CLQ8IV45 518 aa19.02■□□□□ 0.64
CMTM1-212ENST00000529386 POLKQ9UBT6 870 aa19.02■□□□□ 0.64
CMTM1-212ENST00000529386 PARD3Q8TEW0 1356 aa19.02■□□□□ 0.64
CMTM1-212ENST00000529386 PLCH1Q4KWH8 1693 aa19.01■□□□□ 0.63
CMTM1-212ENST00000529386 SLIT2O94813 1529 aa19.01■□□□□ 0.63
CMTM1-212ENST00000529386 FBLN1P23142 703 aa19.01■□□□□ 0.63
CMTM1-212ENST00000529386 HOXC9P31274 260 aa19.01■□□□□ 0.63
CMTM1-212ENST00000529386 SMG6Q86US8 1419 aaKnown RBP19■□□□□ 0.63
CMTM1-212ENST00000529386 EMILIN1Q9Y6C2 1016 aa19■□□□□ 0.63
CMTM1-212ENST00000529386 CSB-PGBD3P0DP91 1061 aa18.99■□□□□ 0.63
CMTM1-212ENST00000529386 CFAP53Q96M91 514 aa18.99■□□□□ 0.63
CMTM1-212ENST00000529386 STRN4Q9NRL3 753 aa18.99■□□□□ 0.63
CMTM1-212ENST00000529386 TRPC5Q9UL62 973 aaPredicted RBP18.99■□□□□ 0.63
CMTM1-212ENST00000529386 COL18A1P39060 1754 aa18.98■□□□□ 0.63
CMTM1-212ENST00000529386 LMO7Q8WWI1 1683 aa18.98■□□□□ 0.63
CMTM1-212ENST00000529386 INSRP06213 1382 aa18.98■□□□□ 0.63
CMTM1-212ENST00000529386 PPP2R1AP30153 589 aa18.98■□□□□ 0.63
CMTM1-212ENST00000529386 MTHFSP49914 203 aa18.98■□□□□ 0.63
CMTM1-212ENST00000529386 PRKRIP1Q9H875 184 aaPredicted RBP18.98■□□□□ 0.63
CMTM1-212ENST00000529386 AXIN2Q9Y2T1 843 aa18.97■□□□□ 0.63
CMTM1-212ENST00000529386 CCDC9Q9Y3X0 531 aaKnown RBP18.97■□□□□ 0.63
CMTM1-212ENST00000529386 CAMTA1Q9Y6Y1 1673 aa18.97■□□□□ 0.63
CMTM1-212ENST00000529386 MYBBP1AQ9BQG0 1328 aaKnown RBP18.97■□□□□ 0.63
CMTM1-212ENST00000529386 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.97■□□□□ 0.63
CMTM1-212ENST00000529386 BCL9LQ86UU0 1499 aa18.97■□□□□ 0.63
CMTM1-212ENST00000529386 CDK12Q9NYV4 1490 aaPredicted RBP18.97■□□□□ 0.63
CMTM1-212ENST00000529386 VPS72Q15906 364 aa18.96■□□□□ 0.63
CMTM1-212ENST00000529386 ANKRD24Q8TF21 1146 aa18.96■□□□□ 0.63
CMTM1-212ENST00000529386 WDR17Q8IZU2 1322 aa18.96■□□□□ 0.63
CMTM1-212ENST00000529386 COL5A2P05997 1499 aaPredicted RBP18.96■□□□□ 0.63
CMTM1-212ENST00000529386 HSP90AB2PQ58FF8 381 aa18.95■□□□□ 0.62
CMTM1-212ENST00000529386 TOM1L2Q6ZVM7 507 aa18.95■□□□□ 0.62
CMTM1-212ENST00000529386 QTRT2Q9H974 415 aaKnown RBP18.95■□□□□ 0.62
CMTM1-212ENST00000529386 ERBB3P21860 1342 aa18.95■□□□□ 0.62
CMTM1-212ENST00000529386 RGPD5Q99666 1765 aa18.94■□□□□ 0.62
CMTM1-212ENST00000529386 LTV1Q96GA3 475 aaPredicted RBP18.94■□□□□ 0.62
CMTM1-212ENST00000529386 DIEXFQ68CQ4 756 aaKnown RBP18.93■□□□□ 0.62
CMTM1-212ENST00000529386 NLRP2Q9NX02 1062 aa18.93■□□□□ 0.62
CMTM1-212ENST00000529386 NRAPQ86VF7 1730 aa18.93■□□□□ 0.62
CMTM1-212ENST00000529386 CRB1P82279 1406 aa18.92■□□□□ 0.62
CMTM1-212ENST00000529386 PEAK1Q9H792 1746 aa18.92■□□□□ 0.62
CMTM1-212ENST00000529386 FAM208AQ9UK61 1670 aaKnown RBP18.92■□□□□ 0.62
CMTM1-212ENST00000529386 ATRNO75882 1429 aa18.91■□□□□ 0.62
CMTM1-212ENST00000529386 LARP1Q6PKG0 1096 aaKnown RBP18.91■□□□□ 0.62
CMTM1-212ENST00000529386 CARD10Q9BWT7 1032 aa18.91■□□□□ 0.62
CMTM1-212ENST00000529386 DIAPH1O60610 1272 aaKnown RBP18.9■□□□□ 0.62
CMTM1-212ENST00000529386 GJD4Q96KN9 370 aaPredicted RBP18.9■□□□□ 0.62
CMTM1-212ENST00000529386 NUDCQ9Y266 331 aa18.9■□□□□ 0.62
CMTM1-212ENST00000529386 THRAP3Q9Y2W1 955 aaKnown RBP18.9■□□□□ 0.62
CMTM1-212ENST00000529386 SPATA31A5Q5VU36 1347 aa18.9■□□□□ 0.62
CMTM1-212ENST00000529386 SPATA31A7Q8IWB4 1347 aa18.9■□□□□ 0.62
CMTM1-212ENST00000529386 RXRBP28702 533 aa18.89■□□□□ 0.61
CMTM1-212ENST00000529386 RBM6P78332 1123 aaKnown RBP18.89■□□□□ 0.61
CMTM1-212ENST00000529386 EIF4A2Q14240 407 aaKnown RBP18.89■□□□□ 0.61
CMTM1-212ENST00000529386 TCP11L2Q8N4U5 519 aa18.88■□□□□ 0.61
CMTM1-212ENST00000529386 USP35Q9P2H5 1018 aa18.88■□□□□ 0.61
CMTM1-212ENST00000529386 SPATA31A1Q5TZJ5 1347 aa18.88■□□□□ 0.61
CMTM1-212ENST00000529386 CDCA7Q9BWT1 371 aaPredicted RBP18.87■□□□□ 0.61
CMTM1-212ENST00000529386 RGS17Q9UGC6 210 aaPredicted RBP18.87■□□□□ 0.61
CMTM1-212ENST00000529386 IL13P35225 146 aa18.85■□□□□ 0.61
CMTM1-212ENST00000529386 NBPF6Q5VWK0 638 aa18.84■□□□□ 0.61
CMTM1-212ENST00000529386 BARGINQ6ZT62 677 aa18.84■□□□□ 0.61
CMTM1-212ENST00000529386 NBPF4Q96M43 638 aa18.84■□□□□ 0.61
CMTM1-212ENST00000529386 A0A0G2JS52 829 aa18.83■□□□□ 0.6
CMTM1-212ENST00000529386 U2SURPO15042 1029 aaKnown RBP18.83■□□□□ 0.6
CMTM1-212ENST00000529386 MYT1Q01538 1121 aa18.83■□□□□ 0.6
CMTM1-212ENST00000529386 POTEAQ6S8J7 498 aa18.83■□□□□ 0.6
CMTM1-212ENST00000529386 RAPGEF4Q8WZA2 1011 aa18.83■□□□□ 0.6
CMTM1-212ENST00000529386 EYA1Q99502 592 aa18.83■□□□□ 0.6
CMTM1-212ENST00000529386 IGSF1Q8N6C5 1336 aa18.81■□□□□ 0.6
CMTM1-212ENST00000529386 IL2RBP14784 551 aa18.81■□□□□ 0.6
CMTM1-212ENST00000529386 FAM98CQ17RN3 349 aaKnown RBP18.81■□□□□ 0.6
CMTM1-212ENST00000529386 COL3A1P02461 1466 aaPredicted RBP18.81■□□□□ 0.6
CMTM1-212ENST00000529386 ONECUT3O60422 494 aaPredicted RBP18.8■□□□□ 0.6
CMTM1-212ENST00000529386 PNNQ9H307 717 aaKnown RBP18.8■□□□□ 0.6
CMTM1-212ENST00000529386 RGPD2P0DJD1 1756 aa18.79■□□□□ 0.6
CMTM1-212ENST00000529386 U2AF1L5P0DN76 240 aaPredicted RBP18.79■□□□□ 0.6
CMTM1-212ENST00000529386 TATP17735 454 aaPredicted RBP18.79■□□□□ 0.6
CMTM1-212ENST00000529386 U2AF1Q01081 240 aaKnown RBP eCLIP18.79■□□□□ 0.6
CMTM1-212ENST00000529386 WDR43Q15061 677 aaKnown RBP eCLIP18.79■□□□□ 0.6
CMTM1-212ENST00000529386 GLI3P10071 1580 aa18.79■□□□□ 0.6
CMTM1-212ENST00000529386 SULT6B1Q6IMI4 303 aa18.78■□□□□ 0.6
CMTM1-212ENST00000529386 USHBP1Q8N6Y0 703 aa18.78■□□□□ 0.6
CMTM1-212ENST00000529386 MRS2Q9HD23 443 aa18.78■□□□□ 0.6
CMTM1-212ENST00000529386 PLEKHG2Q9H7P9 1386 aa18.78■□□□□ 0.6
CMTM1-212ENST00000529386 NCAPD2Q15021 1401 aa18.77■□□□□ 0.6
CMTM1-212ENST00000529386 NEFMP07197 916 aa18.77■□□□□ 0.6
CMTM1-212ENST00000529386 EXOC5O00471 708 aa18.76■□□□□ 0.59
CMTM1-212ENST00000529386 DDB1Q16531 1140 aa18.76■□□□□ 0.59
CMTM1-212ENST00000529386 SEPT12Q8IYM1 358 aa18.76■□□□□ 0.59
CMTM1-212ENST00000529386 RGPD1P0DJD0 1748 aa18.75■□□□□ 0.59
CMTM1-212ENST00000529386 FCHSD2O94868 740 aa18.75■□□□□ 0.59
CMTM1-212ENST00000529386 KDRP35968 1356 aa18.75■□□□□ 0.59
CMTM1-212ENST00000529386 CCER2I3L3R5 266 aa18.74■□□□□ 0.59
CMTM1-212ENST00000529386 PDE3BQ13370 1112 aa18.74■□□□□ 0.59
CMTM1-212ENST00000529386 SPG7Q9UQ90 795 aa18.74■□□□□ 0.59
CMTM1-212ENST00000529386 WNK3Q9BYP7 1800 aa18.74■□□□□ 0.59
CMTM1-212ENST00000529386 PARP4Q9UKK3 1724 aaKnown RBP18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms