RNA–Protein interactions for RNA: ENST00000527653.1

GPAA1-209, Transcript of glycosylphosphatidylinositol anchor attachment 1, humanhuman

TSL 2

Gene GPAA1, Length 856 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPAA1-209ENST00000527653 PANK3Q9H999 370 aa26.37■■□□□ 1.81
GPAA1-209ENST00000527653 COL5A2P05997 1499 aaPredicted RBP26.36■■□□□ 1.81
GPAA1-209ENST00000527653 SOCS7O14512 581 aa26.35■■□□□ 1.81
GPAA1-209ENST00000527653 COL18A1P39060 1754 aa26.35■■□□□ 1.81
GPAA1-209ENST00000527653 CCDC7Q96M83 1385 aa26.34■■□□□ 1.81
GPAA1-209ENST00000527653 ANKRD26Q9UPS8 1709 aa26.34■■□□□ 1.81
GPAA1-209ENST00000527653 RGPD5Q99666 1765 aa26.33■■□□□ 1.81
GPAA1-209ENST00000527653 CSB-PGBD3P0DP91 1061 aa26.33■■□□□ 1.81
GPAA1-209ENST00000527653 KNSTRNQ9Y448 316 aa26.33■■□□□ 1.81
GPAA1-209ENST00000527653 SPATA31A5Q5VU36 1347 aa26.33■■□□□ 1.81
GPAA1-209ENST00000527653 SPATA31A7Q8IWB4 1347 aa26.33■■□□□ 1.81
GPAA1-209ENST00000527653 NSD2O96028 1365 aa26.31■■□□□ 1.8
GPAA1-209ENST00000527653 CRB1P82279 1406 aa26.31■■□□□ 1.8
GPAA1-209ENST00000527653 USP35Q9P2H5 1018 aa26.3■■□□□ 1.8
GPAA1-209ENST00000527653 AMPHP49418 695 aa26.29■■□□□ 1.8
GPAA1-209ENST00000527653 FAM98CQ17RN3 349 aaKnown RBP26.29■■□□□ 1.8
GPAA1-209ENST00000527653 LARP1Q6PKG0 1096 aaKnown RBP26.29■■□□□ 1.8
GPAA1-209ENST00000527653 TOM1L2Q6ZVM7 507 aa26.29■■□□□ 1.8
GPAA1-209ENST00000527653 SPATA31A1Q5TZJ5 1347 aa26.29■■□□□ 1.8
GPAA1-209ENST00000527653 WASHC2AQ641Q2 1341 aa26.29■■□□□ 1.8
GPAA1-209ENST00000527653 BLMP54132 1417 aaPredicted RBP26.29■■□□□ 1.8
GPAA1-209ENST00000527653 WDR17Q8IZU2 1322 aa26.27■■□□□ 1.8
GPAA1-209ENST00000527653 RTL1A6NKG5 1358 aa26.26■■□□□ 1.79
GPAA1-209ENST00000527653 AXIN2Q9Y2T1 843 aa26.26■■□□□ 1.79
GPAA1-209ENST00000527653 MAP3K19Q56UN5 1328 aa26.25■■□□□ 1.79
GPAA1-209ENST00000527653 SEPT12Q8IYM1 358 aa26.25■■□□□ 1.79
GPAA1-209ENST00000527653 TCP11L2Q8N4U5 519 aa26.25■■□□□ 1.79
GPAA1-209ENST00000527653 THRAP3Q9Y2W1 955 aaKnown RBP26.25■■□□□ 1.79
GPAA1-209ENST00000527653 FAM208AQ9UK61 1670 aaKnown RBP26.25■■□□□ 1.79
GPAA1-209ENST00000527653 SMG6Q86US8 1419 aaKnown RBP26.23■■□□□ 1.79
GPAA1-209ENST00000527653 IP6K1Q92551 441 aa26.23■■□□□ 1.79
GPAA1-209ENST00000527653 RRS1Q15050 365 aaKnown RBP26.22■■□□□ 1.79
GPAA1-209ENST00000527653 BRWD3Q6RI45 1802 aa26.22■■□□□ 1.79
GPAA1-209ENST00000527653 ERBB3P21860 1342 aa26.21■■□□□ 1.79
GPAA1-209ENST00000527653 ONECUT3O60422 494 aaPredicted RBP26.21■■□□□ 1.79
GPAA1-209ENST00000527653 ANKRD24Q8TF21 1146 aa26.21■■□□□ 1.79
GPAA1-209ENST00000527653 THSD7AQ9UPZ6 1657 aa26.21■■□□□ 1.79
GPAA1-209ENST00000527653 KIF24Q5T7B8 1368 aa26.2■■□□□ 1.79
GPAA1-209ENST00000527653 HOXC9P31274 260 aa26.2■■□□□ 1.78
GPAA1-209ENST00000527653 BARGINQ6ZT62 677 aa26.2■■□□□ 1.78
GPAA1-209ENST00000527653 FLT4P35916 1363 aa26.2■■□□□ 1.78
GPAA1-209ENST00000527653 WNK3Q9BYP7 1800 aa26.19■■□□□ 1.78
GPAA1-209ENST00000527653 MORC1Q86VD1 984 aa26.19■■□□□ 1.78
GPAA1-209ENST00000527653 NLRP2Q9NX02 1062 aa26.19■■□□□ 1.78
GPAA1-209ENST00000527653 MAP2P11137 1827 aaKnown RBP26.18■■□□□ 1.78
GPAA1-209ENST00000527653 TNNT2P45379 298 aaPredicted RBP26.18■■□□□ 1.78
GPAA1-209ENST00000527653 LTV1Q96GA3 475 aaPredicted RBP26.18■■□□□ 1.78
GPAA1-209ENST00000527653 PPM1GO15355 546 aaPredicted RBP26.17■■□□□ 1.78
GPAA1-209ENST00000527653 FBLN1P23142 703 aa26.17■■□□□ 1.78
GPAA1-209ENST00000527653 KRT27Q7Z3Y8 459 aa26.17■■□□□ 1.78
GPAA1-209ENST00000527653 CARD10Q9BWT7 1032 aa26.17■■□□□ 1.78
GPAA1-209ENST00000527653 PARP4Q9UKK3 1724 aaKnown RBP26.15■■□□□ 1.78
GPAA1-209ENST00000527653 CDCA7Q9BWT1 371 aaPredicted RBP26.15■■□□□ 1.78
GPAA1-209ENST00000527653 PDE3BQ13370 1112 aa26.13■■□□□ 1.77
GPAA1-209ENST00000527653 PEAK1Q9H792 1746 aa26.13■■□□□ 1.77
GPAA1-209ENST00000527653 INSRP06213 1382 aa26.12■■□□□ 1.77
GPAA1-209ENST00000527653 EMILIN1Q9Y6C2 1016 aa26.12■■□□□ 1.77
GPAA1-209ENST00000527653 AMER1Q5JTC6 1135 aaPredicted RBP26.11■■□□□ 1.77
GPAA1-209ENST00000527653 CC2D1BQ5T0F9 858 aaKnown RBP26.09■■□□□ 1.77
GPAA1-209ENST00000527653 LRRC37A3O60309 1634 aa26.09■■□□□ 1.77
GPAA1-209ENST00000527653 PER1O15534 1290 aaPredicted RBP26.08■■□□□ 1.77
GPAA1-209ENST00000527653 CNGB1Q14028 1251 aaPredicted RBP26.08■■□□□ 1.77
GPAA1-209ENST00000527653 DDB1Q16531 1140 aa26.08■■□□□ 1.77
GPAA1-209ENST00000527653 NPC1L1Q9UHC9 1359 aa26.07■■□□□ 1.76
GPAA1-209ENST00000527653 HSP90AB2PQ58FF8 381 aa26.07■■□□□ 1.76
GPAA1-209ENST00000527653 POLKQ9UBT6 870 aa26.07■■□□□ 1.76
GPAA1-209ENST00000527653 UPF1Q92900 1129 aaKnown RBP eCLIP26.06■■□□□ 1.76
GPAA1-209ENST00000527653 RGPD2P0DJD1 1756 aa26.05■■□□□ 1.76
GPAA1-209ENST00000527653 IL2RBP14784 551 aa26.05■■□□□ 1.76
GPAA1-209ENST00000527653 SF3B2Q13435 895 aaKnown RBP26.05■■□□□ 1.76
GPAA1-209ENST00000527653 DISP2A7MBM2 1401 aa26.03■■□□□ 1.76
GPAA1-209ENST00000527653 EXOC5O00471 708 aa26.02■■□□□ 1.76
GPAA1-209ENST00000527653 CCDC125Q86Z20 511 aa26.02■■□□□ 1.76
GPAA1-209ENST00000527653 TNS2Q63HR2 1409 aa26.01■■□□□ 1.75
GPAA1-209ENST00000527653 OVOS2A0A0G2JMS6 1433 aa26■■□□□ 1.75
GPAA1-209ENST00000527653 FAM196AQ6ZSG2 479 aa26■■□□□ 1.75
GPAA1-209ENST00000527653 RGPD1P0DJD0 1748 aa26■■□□□ 1.75
GPAA1-209ENST00000527653 RAPGEF4Q8WZA2 1011 aa25.99■■□□□ 1.75
GPAA1-209ENST00000527653 FAM182BQ5T319 152 aa25.98■■□□□ 1.75
GPAA1-209ENST00000527653 NBPF6Q5VWK0 638 aa25.97■■□□□ 1.75
GPAA1-209ENST00000527653 NBPF4Q96M43 638 aa25.97■■□□□ 1.75
GPAA1-209ENST00000527653 USHBP1Q8N6Y0 703 aa25.96■■□□□ 1.75
GPAA1-209ENST00000527653 TATP17735 454 aaPredicted RBP25.95■■□□□ 1.74
GPAA1-209ENST00000527653 DDX10Q13206 875 aaKnown RBP25.93■■□□□ 1.74
GPAA1-209ENST00000527653 EIF4A2Q14240 407 aaKnown RBP25.93■■□□□ 1.74
GPAA1-209ENST00000527653 MTHFSP49914 203 aa25.92■■□□□ 1.74
GPAA1-209ENST00000527653 MEGF6O75095 1541 aa25.9■■□□□ 1.74
GPAA1-209ENST00000527653 BAG6P46379 1132 aa25.89■■□□□ 1.74
GPAA1-209ENST00000527653 CFAP53Q96M91 514 aa25.89■■□□□ 1.74
GPAA1-209ENST00000527653 EYA1Q99502 592 aa25.89■■□□□ 1.74
GPAA1-209ENST00000527653 MARCH10Q8NA82 808 aaPredicted RBP25.88■■□□□ 1.73
GPAA1-209ENST00000527653 TRIM37O94972 964 aa25.87■■□□□ 1.73
GPAA1-209ENST00000527653 ZCRB1Q8TBF4 217 aaKnown RBP25.87■■□□□ 1.73
GPAA1-209ENST00000527653 TNS1Q9HBL0 1735 aaKnown RBP25.87■■□□□ 1.73
GPAA1-209ENST00000527653 EP400Q96L91 3159 aa25.87■■□□□ 1.73
GPAA1-209ENST00000527653 DDX54Q8TDD1 881 aaKnown RBP25.86■■□□□ 1.73
GPAA1-209ENST00000527653 NCAPD2Q15021 1401 aa25.86■■□□□ 1.73
GPAA1-209ENST00000527653 SBF2Q86WG5 1849 aa25.85■■□□□ 1.73
GPAA1-209ENST00000527653 IGSF1Q8N6C5 1336 aa25.85■■□□□ 1.73
GPAA1-209ENST00000527653 ZNF316A6NFI3 1004 aaPredicted RBP25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms