RNA–Protein interactions for RNA: ENST00000526124.1

LTBP3-205, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 5

Gene LTBP3, Length 347 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-205ENST00000526124 HSP90AB2PQ58FF8 381 aa22.39■■□□□ 1.17
LTBP3-205ENST00000526124 MYBBP1AQ9BQG0 1328 aaKnown RBP22.37■■□□□ 1.17
LTBP3-205ENST00000526124 EVA1CP58658 441 aa22.36■■□□□ 1.17
LTBP3-205ENST00000526124 FLT4P35916 1363 aa22.36■■□□□ 1.17
LTBP3-205ENST00000526124 RTL1A6NKG5 1358 aa22.35■■□□□ 1.17
LTBP3-205ENST00000526124 COL18A1P39060 1754 aa22.35■■□□□ 1.17
LTBP3-205ENST00000526124 CAMTA1Q9Y6Y1 1673 aa22.34■■□□□ 1.17
LTBP3-205ENST00000526124 UNC5CLQ8IV45 518 aa22.34■■□□□ 1.17
LTBP3-205ENST00000526124 INSRP06213 1382 aa22.34■■□□□ 1.17
LTBP3-205ENST00000526124 AFF2P51816 1311 aa22.33■■□□□ 1.17
LTBP3-205ENST00000526124 SMG6Q86US8 1419 aaKnown RBP22.33■■□□□ 1.17
LTBP3-205ENST00000526124 LTN1O94822 1766 aa22.33■■□□□ 1.17
LTBP3-205ENST00000526124 COL14A1Q05707 1796 aaKnown RBP22.33■■□□□ 1.17
LTBP3-205ENST00000526124 SLIT2O94813 1529 aa22.33■■□□□ 1.17
LTBP3-205ENST00000526124 ANKRD24Q8TF21 1146 aa22.33■■□□□ 1.17
LTBP3-205ENST00000526124 USP21Q9UK80 565 aa22.33■■□□□ 1.17
LTBP3-205ENST00000526124 LTV1Q96GA3 475 aaPredicted RBP22.32■■□□□ 1.16
LTBP3-205ENST00000526124 BLMP54132 1417 aaPredicted RBP22.31■■□□□ 1.16
LTBP3-205ENST00000526124 CFAP53Q96M91 514 aa22.31■■□□□ 1.16
LTBP3-205ENST00000526124 STRN4Q9NRL3 753 aa22.31■■□□□ 1.16
LTBP3-205ENST00000526124 PEAK1Q9H792 1746 aa22.31■■□□□ 1.16
LTBP3-205ENST00000526124 BCL9LQ86UU0 1499 aa22.3■■□□□ 1.16
LTBP3-205ENST00000526124 EIF4A2Q14240 407 aaKnown RBP22.3■■□□□ 1.16
LTBP3-205ENST00000526124 DIAPH1O60610 1272 aaKnown RBP22.29■■□□□ 1.16
LTBP3-205ENST00000526124 CSB-PGBD3P0DP91 1061 aa22.29■■□□□ 1.16
LTBP3-205ENST00000526124 ABCC6O95255 1503 aa22.29■■□□□ 1.16
LTBP3-205ENST00000526124 LMO7Q8WWI1 1683 aa22.29■■□□□ 1.16
LTBP3-205ENST00000526124 IL13P35225 146 aa22.28■■□□□ 1.16
LTBP3-205ENST00000526124 LARP1Q6PKG0 1096 aaKnown RBP22.28■■□□□ 1.16
LTBP3-205ENST00000526124 ERBB3P21860 1342 aa22.28■■□□□ 1.16
LTBP3-205ENST00000526124 WDR17Q8IZU2 1322 aa22.28■■□□□ 1.16
LTBP3-205ENST00000526124 ZNF772Q68DY9 489 aaPredicted RBP22.27■■□□□ 1.16
LTBP3-205ENST00000526124 MIER1Q8N108 512 aa22.27■■□□□ 1.16
LTBP3-205ENST00000526124 QTRT2Q9H974 415 aaKnown RBP22.27■■□□□ 1.16
LTBP3-205ENST00000526124 RGPD5Q99666 1765 aa22.27■■□□□ 1.16
LTBP3-205ENST00000526124 CDK12Q9NYV4 1490 aaPredicted RBP22.27■■□□□ 1.16
LTBP3-205ENST00000526124 VPS72Q15906 364 aa22.26■■□□□ 1.15
LTBP3-205ENST00000526124 CCDC184Q52MB2 194 aa22.26■■□□□ 1.15
LTBP3-205ENST00000526124 NBPF6Q5VWK0 638 aa22.26■■□□□ 1.15
LTBP3-205ENST00000526124 TOM1L2Q6ZVM7 507 aa22.26■■□□□ 1.15
LTBP3-205ENST00000526124 NBPF4Q96M43 638 aa22.26■■□□□ 1.15
LTBP3-205ENST00000526124 RGS17Q9UGC6 210 aaPredicted RBP22.26■■□□□ 1.15
LTBP3-205ENST00000526124 NLRP2Q9NX02 1062 aa22.25■■□□□ 1.15
LTBP3-205ENST00000526124 COL5A2P05997 1499 aaPredicted RBP22.25■■□□□ 1.15
LTBP3-205ENST00000526124 EYA1Q99502 592 aa22.24■■□□□ 1.15
LTBP3-205ENST00000526124 CARD10Q9BWT7 1032 aa22.24■■□□□ 1.15
LTBP3-205ENST00000526124 TRPC5Q9UL62 973 aaPredicted RBP22.24■■□□□ 1.15
LTBP3-205ENST00000526124 PLCH1Q4KWH8 1693 aa22.23■■□□□ 1.15
LTBP3-205ENST00000526124 NWD2Q9ULI1 1742 aa22.23■■□□□ 1.15
LTBP3-205ENST00000526124 PHF23Q9BUL5 403 aaPredicted RBP22.23■■□□□ 1.15
LTBP3-205ENST00000526124 NUDCQ9Y266 331 aa22.23■■□□□ 1.15
LTBP3-205ENST00000526124 CCDC9Q9Y3X0 531 aaKnown RBP22.22■■□□□ 1.15
LTBP3-205ENST00000526124 SPATA31A5Q5VU36 1347 aa22.22■■□□□ 1.15
LTBP3-205ENST00000526124 SPATA31A7Q8IWB4 1347 aa22.22■■□□□ 1.15
LTBP3-205ENST00000526124 GJD4Q96KN9 370 aaPredicted RBP22.21■■□□□ 1.15
LTBP3-205ENST00000526124 SPATA31A1Q5TZJ5 1347 aa22.21■■□□□ 1.15
LTBP3-205ENST00000526124 CCER2I3L3R5 266 aa22.2■■□□□ 1.14
LTBP3-205ENST00000526124 CRB1P82279 1406 aa22.2■■□□□ 1.14
LTBP3-205ENST00000526124 COL3A1P02461 1466 aaPredicted RBP22.2■■□□□ 1.14
LTBP3-205ENST00000526124 U2SURPO15042 1029 aaKnown RBP22.19■■□□□ 1.14
LTBP3-205ENST00000526124 MRS2Q9HD23 443 aa22.19■■□□□ 1.14
LTBP3-205ENST00000526124 USP35Q9P2H5 1018 aa22.19■■□□□ 1.14
LTBP3-205ENST00000526124 NRAPQ86VF7 1730 aa22.18■■□□□ 1.14
LTBP3-205ENST00000526124 ATRNO75882 1429 aa22.18■■□□□ 1.14
LTBP3-205ENST00000526124 TCP11L2Q8N4U5 519 aa22.18■■□□□ 1.14
LTBP3-205ENST00000526124 USHBP1Q8N6Y0 703 aa22.18■■□□□ 1.14
LTBP3-205ENST00000526124 IGSF1Q8N6C5 1336 aa22.17■■□□□ 1.14
LTBP3-205ENST00000526124 THRAP3Q9Y2W1 955 aaKnown RBP22.17■■□□□ 1.14
LTBP3-205ENST00000526124 POTEAQ6S8J7 498 aa22.16■■□□□ 1.14
LTBP3-205ENST00000526124 PNISRQ8TF01 805 aaKnown RBP22.16■■□□□ 1.14
LTBP3-205ENST00000526124 U2AF1L5P0DN76 240 aaPredicted RBP22.15■■□□□ 1.14
LTBP3-205ENST00000526124 RBM6P78332 1123 aaKnown RBP22.15■■□□□ 1.14
LTBP3-205ENST00000526124 U2AF1Q01081 240 aaKnown RBP eCLIP22.15■■□□□ 1.14
LTBP3-205ENST00000526124 SULT6B1Q6IMI4 303 aa22.15■■□□□ 1.14
LTBP3-205ENST00000526124 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.14■■□□□ 1.14
LTBP3-205ENST00000526124 ONECUT3O60422 494 aaPredicted RBP22.14■■□□□ 1.13
LTBP3-205ENST00000526124 BARGINQ6ZT62 677 aa22.14■■□□□ 1.13
LTBP3-205ENST00000526124 HMOX1P09601 288 aa22.13■■□□□ 1.13
LTBP3-205ENST00000526124 RXRBP28702 533 aa22.13■■□□□ 1.13
LTBP3-205ENST00000526124 RGPD2P0DJD1 1756 aa22.12■■□□□ 1.13
LTBP3-205ENST00000526124 FCHSD2O94868 740 aa22.12■■□□□ 1.13
LTBP3-205ENST00000526124 AEBP1Q8IUX7 1158 aa22.12■■□□□ 1.13
LTBP3-205ENST00000526124 ADAMTS8Q9UP79 889 aa22.12■■□□□ 1.13
LTBP3-205ENST00000526124 IL2RBP14784 551 aa22.11■■□□□ 1.13
LTBP3-205ENST00000526124 WDR43Q15061 677 aaKnown RBP eCLIP22.11■■□□□ 1.13
LTBP3-205ENST00000526124 FAM98CQ17RN3 349 aaKnown RBP22.11■■□□□ 1.13
LTBP3-205ENST00000526124 NCAPD2Q15021 1401 aa22.1■■□□□ 1.13
LTBP3-205ENST00000526124 RAPGEF4Q8WZA2 1011 aa22.1■■□□□ 1.13
LTBP3-205ENST00000526124 CDCA7Q9BWT1 371 aaPredicted RBP22.1■■□□□ 1.13
LTBP3-205ENST00000526124 FAM208AQ9UK61 1670 aaKnown RBP22.09■■□□□ 1.13
LTBP3-205ENST00000526124 KDRP35968 1356 aa22.09■■□□□ 1.13
LTBP3-205ENST00000526124 TATP17735 454 aaPredicted RBP22.08■■□□□ 1.13
LTBP3-205ENST00000526124 RSPH6AQ9H0K4 717 aa22.08■■□□□ 1.13
LTBP3-205ENST00000526124 RGPD1P0DJD0 1748 aa22.07■■□□□ 1.12
LTBP3-205ENST00000526124 PNNQ9H307 717 aaKnown RBP22.07■■□□□ 1.12
LTBP3-205ENST00000526124 GLI3P10071 1580 aa22.05■■□□□ 1.12
LTBP3-205ENST00000526124 EXOC5O00471 708 aa22.05■■□□□ 1.12
LTBP3-205ENST00000526124 PRKAR2BP31323 418 aa22.05■■□□□ 1.12
LTBP3-205ENST00000526124 FAM9BQ8IZU0 186 aa22.05■■□□□ 1.12
LTBP3-205ENST00000526124 SEPT12Q8IYM1 358 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms