RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 LORP23490 312 aaPredicted RBP9.07□□□□□ -0.96
CSDE1-211ENST00000525970 SKIV2LQ15477 1246 aaKnown RBP9.07□□□□□ -0.96
CSDE1-211ENST00000525970 PDXDC2PQ6P474 469 aa9.07□□□□□ -0.96
CSDE1-211ENST00000525970 CCDC116Q8IYX3 515 aa9.07□□□□□ -0.96
CSDE1-211ENST00000525970 TSEN34Q9BSV6 310 aaKnown RBP9.07□□□□□ -0.96
CSDE1-211ENST00000525970 ZC3H4Q9UPT8 1303 aaKnown RBP9.06□□□□□ -0.96
CSDE1-211ENST00000525970 CTDSPL2Q05D32 466 aa9.06□□□□□ -0.96
CSDE1-211ENST00000525970 ERFEQ4G0M1 354 aa9.06□□□□□ -0.96
CSDE1-211ENST00000525970 SH3D19Q5HYK7 790 aa9.06□□□□□ -0.96
CSDE1-211ENST00000525970 CDV3Q9UKY7 258 aaKnown RBP9.06□□□□□ -0.96
CSDE1-211ENST00000525970 CARD14Q9BXL6 1004 aa9.05□□□□□ -0.96
CSDE1-211ENST00000525970 FAM117AQ9C073 453 aa9.05□□□□□ -0.96
CSDE1-211ENST00000525970 SOS2Q07890 1332 aaPredicted RBP9.05□□□□□ -0.96
CSDE1-211ENST00000525970 DDRGK1Q96HY6 314 aa9.04□□□□□ -0.96
CSDE1-211ENST00000525970 ARHGAP9Q9BRR9 750 aa9.04□□□□□ -0.96
CSDE1-211ENST00000525970 PGPEP1Q9NXJ5 209 aa9.04□□□□□ -0.96
CSDE1-211ENST00000525970 FKBPLQ9UIM3 349 aa9.04□□□□□ -0.96
CSDE1-211ENST00000525970 PPP2R2DQ66LE6 453 aa9.03□□□□□ -0.96
CSDE1-211ENST00000525970 C14orf37Q86TY3 774 aa9.03□□□□□ -0.96
CSDE1-211ENST00000525970 IL27Q8NEV9 243 aa9.03□□□□□ -0.96
CSDE1-211ENST00000525970 PPFIA3O75145 1194 aa9.02□□□□□ -0.97
CSDE1-211ENST00000525970 SLC10A4Q96EP9 437 aa9.02□□□□□ -0.97
CSDE1-211ENST00000525970 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.02□□□□□ -0.97
CSDE1-211ENST00000525970 DHX9Q08211 1270 aaKnown RBP9.01□□□□□ -0.97
CSDE1-211ENST00000525970 PPP1R26Q5T8A7 1209 aaPredicted RBP9.01□□□□□ -0.97
CSDE1-211ENST00000525970 LRRN4Q8WUT4 740 aa9.01□□□□□ -0.97
CSDE1-211ENST00000525970 DNMT3LQ9UJW3 386 aa9.01□□□□□ -0.97
CSDE1-211ENST00000525970 GPSM3Q9Y4H4 160 aa9.01□□□□□ -0.97
CSDE1-211ENST00000525970 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9□□□□□ -0.97
CSDE1-211ENST00000525970 Q6ZVU0 165 aa9□□□□□ -0.97
CSDE1-211ENST00000525970 ZBTB33Q86T24 672 aa9□□□□□ -0.97
CSDE1-211ENST00000525970 KCTD15Q96SI1 283 aaPredicted RBP9□□□□□ -0.97
CSDE1-211ENST00000525970 ATP1B4Q9UN42 357 aaPredicted RBP9□□□□□ -0.97
CSDE1-211ENST00000525970 PTK2Q05397 1052 aa8.99□□□□□ -0.97
CSDE1-211ENST00000525970 PNMA1Q8ND90 353 aa8.99□□□□□ -0.97
CSDE1-211ENST00000525970 TTLL8A6PVC2 850 aa8.98□□□□□ -0.97
CSDE1-211ENST00000525970 NR6A1Q15406 480 aa8.98□□□□□ -0.97
CSDE1-211ENST00000525970 SPINT1O43278 529 aa8.97□□□□□ -0.97
CSDE1-211ENST00000525970 PROCA1Q8NCQ7 364 aaPredicted RBP8.97□□□□□ -0.97
CSDE1-211ENST00000525970 AP1G2O75843 785 aa8.95□□□□□ -0.98
CSDE1-211ENST00000525970 CBLBQ13191 982 aa8.95□□□□□ -0.98
CSDE1-211ENST00000525970 INTS6LQ5JSJ4 861 aaKnown RBP8.95□□□□□ -0.98
CSDE1-211ENST00000525970 FBXO31Q5XUX0 539 aaPredicted RBP8.95□□□□□ -0.98
CSDE1-211ENST00000525970 NBPF20Q3BBV1 942 aa8.94□□□□□ -0.98
CSDE1-211ENST00000525970 ADAM32Q8TC27 787 aa8.94□□□□□ -0.98
CSDE1-211ENST00000525970 PTSQ03393 145 aa8.93□□□□□ -0.98
CSDE1-211ENST00000525970 OCSTAMPQ9BR26 566 aa8.93□□□□□ -0.98
CSDE1-211ENST00000525970 USP17L8P0C7I0 530 aa8.91□□□□□ -0.98
CSDE1-211ENST00000525970 NANOS1Q8WY41 292 aaKnown RBP8.91□□□□□ -0.98
CSDE1-211ENST00000525970 FIGNL2A6NMB9 653 aa8.9□□□□□ -0.98
CSDE1-211ENST00000525970 TRIM52Q96A61 297 aa8.9□□□□□ -0.98
CSDE1-211ENST00000525970 SLC35F4A4IF30 521 aa8.89□□□□□ -0.99
CSDE1-211ENST00000525970 CCDC155Q8N6L0 562 aa8.89□□□□□ -0.99
CSDE1-211ENST00000525970 PCMTD1Q96MG8 357 aaPredicted RBP8.89□□□□□ -0.99
CSDE1-211ENST00000525970 GOPCQ9HD26 462 aa8.89□□□□□ -0.99
CSDE1-211ENST00000525970 RFC5P40937 340 aa8.88□□□□□ -0.99
CSDE1-211ENST00000525970 RELBQ01201 579 aa8.88□□□□□ -0.99
CSDE1-211ENST00000525970 DZIP3Q86Y13 1208 aaKnown RBP8.88□□□□□ -0.99
CSDE1-211ENST00000525970 EPS8L1Q8TE68 723 aa8.88□□□□□ -0.99
CSDE1-211ENST00000525970 AGBL1Q96MI9 1066 aa8.88□□□□□ -0.99
CSDE1-211ENST00000525970 HMX1Q9NP08 348 aaPredicted RBP8.88□□□□□ -0.99
CSDE1-211ENST00000525970 ESPNB1AK53 854 aa8.87□□□□□ -0.99
CSDE1-211ENST00000525970 ADH1AP07327 375 aa8.87□□□□□ -0.99
CSDE1-211ENST00000525970 CTSOP43234 321 aaPredicted RBP8.87□□□□□ -0.99
CSDE1-211ENST00000525970 HOMEZQ8IX15 550 aa8.87□□□□□ -0.99
CSDE1-211ENST00000525970 SEPT12Q8IYM1 358 aa8.87□□□□□ -0.99
CSDE1-211ENST00000525970 GPR161Q8N6U8 529 aaKnown RBP8.87□□□□□ -0.99
CSDE1-211ENST00000525970 KRT76Q01546 638 aa8.86□□□□□ -0.99
CSDE1-211ENST00000525970 ZNF784Q8NCA9 323 aaPredicted RBP8.86□□□□□ -0.99
CSDE1-211ENST00000525970 INSM2Q96T92 566 aaPredicted RBP8.86□□□□□ -0.99
CSDE1-211ENST00000525970 POLMQ9NP87 494 aaPredicted RBP8.86□□□□□ -0.99
CSDE1-211ENST00000525970 TMEM259Q4ZIN3 620 aa8.85□□□□□ -0.99
CSDE1-211ENST00000525970 CNTNAP3BQ96NU0 1288 aa8.85□□□□□ -0.99
CSDE1-211ENST00000525970 CNTNAP3Q9BZ76 1288 aa8.85□□□□□ -0.99
CSDE1-211ENST00000525970 TMPRSS4Q9NRS4 437 aa8.85□□□□□ -0.99
CSDE1-211ENST00000525970 ERVH48-1M5A8F1 160 aa8.84□□□□□ -0.99
CSDE1-211ENST00000525970 LILRA1O75019 489 aa8.84□□□□□ -0.99
CSDE1-211ENST00000525970 ITGA6P23229 1130 aa8.84□□□□□ -0.99
CSDE1-211ENST00000525970 KCNMA1Q12791 1236 aa8.84□□□□□ -0.99
CSDE1-211ENST00000525970 RNF217Q8TC41 542 aa8.84□□□□□ -0.99
CSDE1-211ENST00000525970 COL25A1Q9BXS0 654 aaPredicted RBP8.84□□□□□ -0.99
CSDE1-211ENST00000525970 PTGIRP43119 386 aa8.83□□□□□ -1
CSDE1-211ENST00000525970 CCDC125Q86Z20 511 aa8.83□□□□□ -1
CSDE1-211ENST00000525970 TRIM34Q9BYJ4 488 aa8.83□□□□□ -1
CSDE1-211ENST00000525970 ADD1P35611 737 aaKnown RBP8.82□□□□□ -1
CSDE1-211ENST00000525970 RAB15P59190 212 aa8.82□□□□□ -1
CSDE1-211ENST00000525970 SV2AQ7L0J3 742 aa8.82□□□□□ -1
CSDE1-211ENST00000525970 ZNF395Q9H8N7 513 aaPredicted RBP8.82□□□□□ -1
CSDE1-211ENST00000525970 VWA5B2Q8N398 1253 aa8.81□□□□□ -1
CSDE1-211ENST00000525970 RNF225M0QZC1 329 aaPredicted RBP8.8□□□□□ -1
CSDE1-211ENST00000525970 KDF1Q8NAX2 398 aaPredicted RBP8.8□□□□□ -1
CSDE1-211ENST00000525970 SENP3-EIF4A1A0A087X0R7 540 aa8.79□□□□□ -1
CSDE1-211ENST00000525970 CDC14CA4D256 554 aa8.79□□□□□ -1
CSDE1-211ENST00000525970 ZBBXA8MT70 800 aa8.79□□□□□ -1
CSDE1-211ENST00000525970 SLURP2P0DP57 97 aa8.79□□□□□ -1
CSDE1-211ENST00000525970 RNFT1Q5M7Z0 435 aa8.79□□□□□ -1
CSDE1-211ENST00000525970 FOXD4L5Q5VV16 416 aaPredicted RBP8.79□□□□□ -1
CSDE1-211ENST00000525970 SUPT5HO00267 1087 aaKnown RBP8.78□□□□□ -1
CSDE1-211ENST00000525970 LYSMD3Q7Z3D4 306 aa8.78□□□□□ -1
CSDE1-211ENST00000525970 ZNF592Q92610 1267 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms