RNA–Protein interactions for RNA: ENST00000525576.1

NXF1-202, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-202ENST00000525576 GGNBP2Q9H3C7 697 aa15.7■□□□□ 0.1
NXF1-202ENST00000525576 STRN4Q9NRL3 753 aa15.7■□□□□ 0.1
NXF1-202ENST00000525576 GLI3P10071 1580 aa15.7■□□□□ 0.1
NXF1-202ENST00000525576 ZBTB7CA1YPR0 619 aa15.69■□□□□ 0.1
NXF1-202ENST00000525576 UPF1Q92900 1129 aaKnown RBP eCLIP15.69■□□□□ 0.1
NXF1-202ENST00000525576 CCDC7Q96M83 1385 aa15.69■□□□□ 0.1
NXF1-202ENST00000525576 COL5A2P05997 1499 aaPredicted RBP15.69■□□□□ 0.1
NXF1-202ENST00000525576 LTN1O94822 1766 aa15.68■□□□□ 0.1
NXF1-202ENST00000525576 RGS12O14924 1447 aa15.68■□□□□ 0.1
NXF1-202ENST00000525576 SPATA31A1Q5TZJ5 1347 aa15.68■□□□□ 0.1
NXF1-202ENST00000525576 AXIN2Q9Y2T1 843 aa15.67■□□□□ 0.1
NXF1-202ENST00000525576 THRAP3Q9Y2W1 955 aaKnown RBP15.67■□□□□ 0.1
NXF1-202ENST00000525576 KNSTRNQ9Y448 316 aa15.67■□□□□ 0.1
NXF1-202ENST00000525576 WASHC2AQ641Q2 1341 aa15.67■□□□□ 0.1
NXF1-202ENST00000525576 NSD2O96028 1365 aa15.66■□□□□ 0.1
NXF1-202ENST00000525576 LARP1Q6PKG0 1096 aaKnown RBP15.66■□□□□ 0.1
NXF1-202ENST00000525576 RGPD5Q99666 1765 aa15.66■□□□□ 0.1
NXF1-202ENST00000525576 CRB1P82279 1406 aa15.66■□□□□ 0.1
NXF1-202ENST00000525576 BARGINQ6ZT62 677 aa15.65■□□□□ 0.1
NXF1-202ENST00000525576 IP6K1Q92551 441 aa15.65■□□□□ 0.1
NXF1-202ENST00000525576 BLMP54132 1417 aaPredicted RBP15.65■□□□□ 0.1
NXF1-202ENST00000525576 WDR17Q8IZU2 1322 aa15.65■□□□□ 0.1
NXF1-202ENST00000525576 KIF24Q5T7B8 1368 aa15.64■□□□□ 0.09
NXF1-202ENST00000525576 SEPT12Q8IYM1 358 aa15.64■□□□□ 0.09
NXF1-202ENST00000525576 TCP11L2Q8N4U5 519 aa15.64■□□□□ 0.09
NXF1-202ENST00000525576 ANKRD26Q9UPS8 1709 aa15.64■□□□□ 0.09
NXF1-202ENST00000525576 MAP3K19Q56UN5 1328 aa15.64■□□□□ 0.09
NXF1-202ENST00000525576 RTL1A6NKG5 1358 aa15.63■□□□□ 0.09
NXF1-202ENST00000525576 AMPHP49418 695 aa15.63■□□□□ 0.09
NXF1-202ENST00000525576 FAM98CQ17RN3 349 aaKnown RBP15.63■□□□□ 0.09
NXF1-202ENST00000525576 TOM1L2Q6ZVM7 507 aa15.63■□□□□ 0.09
NXF1-202ENST00000525576 CSB-PGBD3P0DP91 1061 aa15.62■□□□□ 0.09
NXF1-202ENST00000525576 ERBB3P21860 1342 aa15.62■□□□□ 0.09
NXF1-202ENST00000525576 PER1O15534 1290 aaPredicted RBP15.61■□□□□ 0.09
NXF1-202ENST00000525576 HOXC9P31274 260 aa15.61■□□□□ 0.09
NXF1-202ENST00000525576 CARD10Q9BWT7 1032 aa15.61■□□□□ 0.09
NXF1-202ENST00000525576 USP35Q9P2H5 1018 aa15.61■□□□□ 0.09
NXF1-202ENST00000525576 A0A0G2JS52 829 aa15.6■□□□□ 0.09
NXF1-202ENST00000525576 FBLN1P23142 703 aa15.6■□□□□ 0.09
NXF1-202ENST00000525576 MYT1Q01538 1121 aa15.6■□□□□ 0.09
NXF1-202ENST00000525576 RRS1Q15050 365 aaKnown RBP15.6■□□□□ 0.09
NXF1-202ENST00000525576 ANKRD24Q8TF21 1146 aa15.6■□□□□ 0.09
NXF1-202ENST00000525576 CDCA7Q9BWT1 371 aaPredicted RBP15.6■□□□□ 0.09
NXF1-202ENST00000525576 THSD7AQ9UPZ6 1657 aa15.6■□□□□ 0.09
NXF1-202ENST00000525576 MAP2P11137 1827 aaKnown RBP15.59■□□□□ 0.09
NXF1-202ENST00000525576 BRWD3Q6RI45 1802 aa15.59■□□□□ 0.09
NXF1-202ENST00000525576 AMER1Q5JTC6 1135 aaPredicted RBP15.59■□□□□ 0.09
NXF1-202ENST00000525576 FLT4P35916 1363 aa15.59■□□□□ 0.09
NXF1-202ENST00000525576 FAM208AQ9UK61 1670 aaKnown RBP15.58■□□□□ 0.08
NXF1-202ENST00000525576 KRT27Q7Z3Y8 459 aa15.58■□□□□ 0.08
NXF1-202ENST00000525576 MORC1Q86VD1 984 aa15.58■□□□□ 0.08
NXF1-202ENST00000525576 NPC1L1Q9UHC9 1359 aa15.58■□□□□ 0.08
NXF1-202ENST00000525576 NLRP2Q9NX02 1062 aa15.57■□□□□ 0.08
NXF1-202ENST00000525576 INSRP06213 1382 aa15.57■□□□□ 0.08
NXF1-202ENST00000525576 POLKQ9UBT6 870 aa15.56■□□□□ 0.08
NXF1-202ENST00000525576 SMG6Q86US8 1419 aaKnown RBP15.56■□□□□ 0.08
NXF1-202ENST00000525576 PARP4Q9UKK3 1724 aaKnown RBP15.55■□□□□ 0.08
NXF1-202ENST00000525576 PDE3BQ13370 1112 aa15.54■□□□□ 0.08
NXF1-202ENST00000525576 CCDC125Q86Z20 511 aa15.54■□□□□ 0.08
NXF1-202ENST00000525576 EMILIN1Q9Y6C2 1016 aa15.54■□□□□ 0.08
NXF1-202ENST00000525576 PEAK1Q9H792 1746 aa15.54■□□□□ 0.08
NXF1-202ENST00000525576 WNK3Q9BYP7 1800 aa15.53■□□□□ 0.08
NXF1-202ENST00000525576 PPM1GO15355 546 aaPredicted RBP15.53■□□□□ 0.08
NXF1-202ENST00000525576 TNNT2P45379 298 aaPredicted RBP15.53■□□□□ 0.08
NXF1-202ENST00000525576 HSP90AB2PQ58FF8 381 aa15.53■□□□□ 0.08
NXF1-202ENST00000525576 LTV1Q96GA3 475 aaPredicted RBP15.53■□□□□ 0.08
NXF1-202ENST00000525576 DISP2A7MBM2 1401 aa15.51■□□□□ 0.07
NXF1-202ENST00000525576 IL2RBP14784 551 aa15.51■□□□□ 0.07
NXF1-202ENST00000525576 DDB1Q16531 1140 aa15.51■□□□□ 0.07
NXF1-202ENST00000525576 EXOC5O00471 708 aa15.5■□□□□ 0.07
NXF1-202ENST00000525576 CC2D1BQ5T0F9 858 aaKnown RBP15.5■□□□□ 0.07
NXF1-202ENST00000525576 FAM196AQ6ZSG2 479 aa15.5■□□□□ 0.07
NXF1-202ENST00000525576 NBPF6Q5VWK0 638 aa15.49■□□□□ 0.07
NXF1-202ENST00000525576 NBPF4Q96M43 638 aa15.49■□□□□ 0.07
NXF1-202ENST00000525576 LRRC37A3O60309 1634 aa15.49■□□□□ 0.07
NXF1-202ENST00000525576 RGPD2P0DJD1 1756 aa15.49■□□□□ 0.07
NXF1-202ENST00000525576 TNS2Q63HR2 1409 aa15.46■□□□□ 0.07
NXF1-202ENST00000525576 OVOS2A0A0G2JMS6 1433 aa15.45■□□□□ 0.06
NXF1-202ENST00000525576 BCL9O00512 1426 aa15.45■□□□□ 0.06
NXF1-202ENST00000525576 MTHFSP49914 203 aa15.45■□□□□ 0.06
NXF1-202ENST00000525576 SF3B2Q13435 895 aaKnown RBP15.45■□□□□ 0.06
NXF1-202ENST00000525576 EIF4A2Q14240 407 aaKnown RBP15.45■□□□□ 0.06
NXF1-202ENST00000525576 RAPGEF4Q8WZA2 1011 aa15.45■□□□□ 0.06
NXF1-202ENST00000525576 NCAPD2Q15021 1401 aa15.44■□□□□ 0.06
NXF1-202ENST00000525576 FAM182BQ5T319 152 aa15.44■□□□□ 0.06
NXF1-202ENST00000525576 TATP17735 454 aaPredicted RBP15.43■□□□□ 0.06
NXF1-202ENST00000525576 DDX10Q13206 875 aaKnown RBP15.43■□□□□ 0.06
NXF1-202ENST00000525576 MARCH10Q8NA82 808 aaPredicted RBP15.43■□□□□ 0.06
NXF1-202ENST00000525576 EYA1Q99502 592 aa15.43■□□□□ 0.06
NXF1-202ENST00000525576 RGPD1P0DJD0 1748 aa15.43■□□□□ 0.06
NXF1-202ENST00000525576 PLEKHG2Q9H7P9 1386 aa15.42■□□□□ 0.06
NXF1-202ENST00000525576 ZCRB1Q8TBF4 217 aaKnown RBP15.42■□□□□ 0.06
NXF1-202ENST00000525576 IGSF1Q8N6C5 1336 aa15.42■□□□□ 0.06
NXF1-202ENST00000525576 USHBP1Q8N6Y0 703 aa15.41■□□□□ 0.06
NXF1-202ENST00000525576 MEGF6O75095 1541 aa15.4■□□□□ 0.06
NXF1-202ENST00000525576 IL13P35225 146 aa15.4■□□□□ 0.06
NXF1-202ENST00000525576 CNGB1Q14028 1251 aaPredicted RBP15.4■□□□□ 0.06
NXF1-202ENST00000525576 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.4■□□□□ 0.061e-9■■□□□ 14.3
NXF1-202ENST00000525576 SBF2Q86WG5 1849 aa15.39■□□□□ 0.05
NXF1-202ENST00000525576 ZNF316A6NFI3 1004 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms