RNA–Protein interactions for RNA: ENST00000524442.1

TTC39A-213, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 3

Gene TTC39A, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-213ENST00000524442 COL5A2P05997 1499 aaPredicted RBP13.93□□□□□ -0.18
TTC39A-213ENST00000524442 SPATA31A1Q5TZJ5 1347 aa13.92□□□□□ -0.18
TTC39A-213ENST00000524442 GLI3P10071 1580 aa13.92□□□□□ -0.18
TTC39A-213ENST00000524442 CCDC7Q96M83 1385 aa13.92□□□□□ -0.18
TTC39A-213ENST00000524442 AXIN2Q9Y2T1 843 aa13.91□□□□□ -0.18
TTC39A-213ENST00000524442 THRAP3Q9Y2W1 955 aaKnown RBP13.91□□□□□ -0.18
TTC39A-213ENST00000524442 WDR17Q8IZU2 1322 aa13.9□□□□□ -0.18
TTC39A-213ENST00000524442 LARP1Q6PKG0 1096 aaKnown RBP13.9□□□□□ -0.18
TTC39A-213ENST00000524442 KNSTRNQ9Y448 316 aa13.9□□□□□ -0.18
TTC39A-213ENST00000524442 NSD2O96028 1365 aa13.9□□□□□ -0.18
TTC39A-213ENST00000524442 COL18A1P39060 1754 aa13.9□□□□□ -0.18
TTC39A-213ENST00000524442 CRB1P82279 1406 aa13.9□□□□□ -0.19
TTC39A-213ENST00000524442 WASHC2AQ641Q2 1341 aa13.9□□□□□ -0.19
TTC39A-213ENST00000524442 FAM98CQ17RN3 349 aaKnown RBP13.89□□□□□ -0.19
TTC39A-213ENST00000524442 BARGINQ6ZT62 677 aa13.89□□□□□ -0.19
TTC39A-213ENST00000524442 SEPT12Q8IYM1 358 aa13.89□□□□□ -0.19
TTC39A-213ENST00000524442 TCP11L2Q8N4U5 519 aa13.89□□□□□ -0.19
TTC39A-213ENST00000524442 IP6K1Q92551 441 aa13.89□□□□□ -0.19
TTC39A-213ENST00000524442 KIF20BQ96Q89 1820 aa13.89□□□□□ -0.19
TTC39A-213ENST00000524442 BLMP54132 1417 aaPredicted RBP13.89□□□□□ -0.19
TTC39A-213ENST00000524442 RTL1A6NKG5 1358 aa13.88□□□□□ -0.19
TTC39A-213ENST00000524442 KIF24Q5T7B8 1368 aa13.88□□□□□ -0.19
TTC39A-213ENST00000524442 TOM1L2Q6ZVM7 507 aa13.88□□□□□ -0.19
TTC39A-213ENST00000524442 MAP3K19Q56UN5 1328 aa13.88□□□□□ -0.19
TTC39A-213ENST00000524442 CSB-PGBD3P0DP91 1061 aa13.87□□□□□ -0.19
TTC39A-213ENST00000524442 AMPHP49418 695 aa13.87□□□□□ -0.19
TTC39A-213ENST00000524442 ERBB3P21860 1342 aa13.87□□□□□ -0.19
TTC39A-213ENST00000524442 CARD10Q9BWT7 1032 aa13.86□□□□□ -0.19
TTC39A-213ENST00000524442 USP35Q9P2H5 1018 aa13.86□□□□□ -0.19
TTC39A-213ENST00000524442 A0A0G2JS52 829 aa13.85□□□□□ -0.19
TTC39A-213ENST00000524442 PER1O15534 1290 aaPredicted RBP13.85□□□□□ -0.19
TTC39A-213ENST00000524442 HOXC9P31274 260 aa13.85□□□□□ -0.19
TTC39A-213ENST00000524442 MYT1Q01538 1121 aa13.85□□□□□ -0.19
TTC39A-213ENST00000524442 ANKRD24Q8TF21 1146 aa13.85□□□□□ -0.19
TTC39A-213ENST00000524442 CDCA7Q9BWT1 371 aaPredicted RBP13.85□□□□□ -0.19
TTC39A-213ENST00000524442 LTN1O94822 1766 aa13.85□□□□□ -0.19
TTC39A-213ENST00000524442 FBLN1P23142 703 aa13.84□□□□□ -0.19
TTC39A-213ENST00000524442 RRS1Q15050 365 aaKnown RBP13.84□□□□□ -0.19
TTC39A-213ENST00000524442 KRT27Q7Z3Y8 459 aa13.84□□□□□ -0.19
TTC39A-213ENST00000524442 FLT4P35916 1363 aa13.83□□□□□ -0.19
TTC39A-213ENST00000524442 THSD7AQ9UPZ6 1657 aa13.83□□□□□ -0.2
TTC39A-213ENST00000524442 AMER1Q5JTC6 1135 aaPredicted RBP13.83□□□□□ -0.2
TTC39A-213ENST00000524442 NPC1L1Q9UHC9 1359 aa13.83□□□□□ -0.2
TTC39A-213ENST00000524442 MORC1Q86VD1 984 aa13.82□□□□□ -0.2
TTC39A-213ENST00000524442 NLRP2Q9NX02 1062 aa13.82□□□□□ -0.2
TTC39A-213ENST00000524442 INSRP06213 1382 aa13.82□□□□□ -0.2
TTC39A-213ENST00000524442 ANKRD26Q9UPS8 1709 aa13.81□□□□□ -0.2
TTC39A-213ENST00000524442 CCDC125Q86Z20 511 aa13.81□□□□□ -0.2
TTC39A-213ENST00000524442 UPF1Q92900 1129 aaKnown RBP eCLIP13.81□□□□□ -0.2
TTC39A-213ENST00000524442 POLKQ9UBT6 870 aa13.81□□□□□ -0.2
TTC39A-213ENST00000524442 SMG6Q86US8 1419 aaKnown RBP13.81□□□□□ -0.2
TTC39A-213ENST00000524442 PDE3BQ13370 1112 aa13.8□□□□□ -0.2
TTC39A-213ENST00000524442 EMILIN1Q9Y6C2 1016 aa13.8□□□□□ -0.2
TTC39A-213ENST00000524442 RGPD5Q99666 1765 aa13.8□□□□□ -0.2
TTC39A-213ENST00000524442 HSP90AB2PQ58FF8 381 aa13.79□□□□□ -0.2
TTC39A-213ENST00000524442 LTV1Q96GA3 475 aaPredicted RBP13.79□□□□□ -0.2
TTC39A-213ENST00000524442 FAM208AQ9UK61 1670 aaKnown RBP13.79□□□□□ -0.2
TTC39A-213ENST00000524442 TNNT2P45379 298 aaPredicted RBP13.78□□□□□ -0.2
TTC39A-213ENST00000524442 DDB1Q16531 1140 aa13.78□□□□□ -0.2
TTC39A-213ENST00000524442 DISP2A7MBM2 1401 aa13.78□□□□□ -0.2
TTC39A-213ENST00000524442 PPM1GO15355 546 aaPredicted RBP13.77□□□□□ -0.21
TTC39A-213ENST00000524442 IL2RBP14784 551 aa13.77□□□□□ -0.21
TTC39A-213ENST00000524442 BRWD3Q6RI45 1802 aa13.77□□□□□ -0.21
TTC39A-213ENST00000524442 FAM196AQ6ZSG2 479 aa13.77□□□□□ -0.21
TTC39A-213ENST00000524442 PARP4Q9UKK3 1724 aaKnown RBP13.77□□□□□ -0.21
TTC39A-213ENST00000524442 EXOC5O00471 708 aa13.76□□□□□ -0.21
TTC39A-213ENST00000524442 PEAK1Q9H792 1746 aa13.76□□□□□ -0.21
TTC39A-213ENST00000524442 CC2D1BQ5T0F9 858 aaKnown RBP13.75□□□□□ -0.21
TTC39A-213ENST00000524442 NBPF6Q5VWK0 638 aa13.75□□□□□ -0.21
TTC39A-213ENST00000524442 NBPF4Q96M43 638 aa13.75□□□□□ -0.21
TTC39A-213ENST00000524442 MAP2P11137 1827 aaKnown RBP13.74□□□□□ -0.21
TTC39A-213ENST00000524442 SF3B2Q13435 895 aaKnown RBP13.73□□□□□ -0.21
TTC39A-213ENST00000524442 WNK3Q9BYP7 1800 aa13.73□□□□□ -0.21
TTC39A-213ENST00000524442 OVOS2A0A0G2JMS6 1433 aa13.73□□□□□ -0.21
TTC39A-213ENST00000524442 BCL9O00512 1426 aa13.73□□□□□ -0.21
TTC39A-213ENST00000524442 TNS2Q63HR2 1409 aa13.73□□□□□ -0.21
TTC39A-213ENST00000524442 LRRC37A3O60309 1634 aa13.72□□□□□ -0.21
TTC39A-213ENST00000524442 EIF4A2Q14240 407 aaKnown RBP13.71□□□□□ -0.21
TTC39A-213ENST00000524442 FAM182BQ5T319 152 aa13.71□□□□□ -0.21
TTC39A-213ENST00000524442 RAPGEF4Q8WZA2 1011 aa13.71□□□□□ -0.21
TTC39A-213ENST00000524442 NCAPD2Q15021 1401 aa13.71□□□□□ -0.22
TTC39A-213ENST00000524442 MTHFSP49914 203 aa13.7□□□□□ -0.22
TTC39A-213ENST00000524442 MARCH10Q8NA82 808 aaPredicted RBP13.7□□□□□ -0.22
TTC39A-213ENST00000524442 EYA1Q99502 592 aa13.7□□□□□ -0.22
TTC39A-213ENST00000524442 EP400Q96L91 3159 aa13.7□□□□□ -0.22
TTC39A-213ENST00000524442 PLEKHG2Q9H7P9 1386 aa13.7□□□□□ -0.22
TTC39A-213ENST00000524442 TATP17735 454 aaPredicted RBP13.69□□□□□ -0.22
TTC39A-213ENST00000524442 ZCRB1Q8TBF4 217 aaKnown RBP13.69□□□□□ -0.22
TTC39A-213ENST00000524442 USHBP1Q8N6Y0 703 aa13.68□□□□□ -0.22
TTC39A-213ENST00000524442 IGSF1Q8N6C5 1336 aa13.67□□□□□ -0.22
TTC39A-213ENST00000524442 TRIM37O94972 964 aa13.67□□□□□ -0.22
TTC39A-213ENST00000524442 BAG6P46379 1132 aa13.67□□□□□ -0.22
TTC39A-213ENST00000524442 DDX10Q13206 875 aaKnown RBP13.67□□□□□ -0.22
TTC39A-213ENST00000524442 MEGF6O75095 1541 aa13.67□□□□□ -0.22
TTC39A-213ENST00000524442 IL13P35225 146 aa13.66□□□□□ -0.22
TTC39A-213ENST00000524442 CNGB1Q14028 1251 aaPredicted RBP13.66□□□□□ -0.22
TTC39A-213ENST00000524442 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.66□□□□□ -0.22
TTC39A-213ENST00000524442 RGPD2P0DJD1 1756 aa13.66□□□□□ -0.22
TTC39A-213ENST00000524442 RGPD1P0DJD0 1748 aa13.65□□□□□ -0.22
TTC39A-213ENST00000524442 DIAPH1O60610 1272 aaKnown RBP13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms