RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 THSD7AQ9UPZ6 1657 aa9.43□□□□□ -0.9
SPIDR-218ENST00000522222 ABCC6O95255 1503 aa9.43□□□□□ -0.9
SPIDR-218ENST00000522222 COL5A2P05997 1499 aaPredicted RBP9.43□□□□□ -0.9
SPIDR-218ENST00000522222 CDCA8Q53HL2 280 aa9.43□□□□□ -0.9
SPIDR-218ENST00000522222 CCDC9Q9Y3X0 531 aaKnown RBP9.43□□□□□ -0.9
SPIDR-218ENST00000522222 KIF20BQ96Q89 1820 aa9.42□□□□□ -0.9
SPIDR-218ENST00000522222 AATKQ6ZMQ8 1374 aa9.42□□□□□ -0.9
SPIDR-218ENST00000522222 ZBTB7CA1YPR0 619 aa9.42□□□□□ -0.9
SPIDR-218ENST00000522222 SOX12O15370 315 aa9.42□□□□□ -0.9
SPIDR-218ENST00000522222 NSD3Q9BZ95 1437 aa9.41□□□□□ -0.9
SPIDR-218ENST00000522222 SPATA31A5Q5VU36 1347 aa9.41□□□□□ -0.9
SPIDR-218ENST00000522222 SPATA31A7Q8IWB4 1347 aa9.41□□□□□ -0.9
SPIDR-218ENST00000522222 BRWD3Q6RI45 1802 aa9.41□□□□□ -0.9
SPIDR-218ENST00000522222 ZBTB22O15209 634 aa9.41□□□□□ -0.9
SPIDR-218ENST00000522222 STRN4Q9NRL3 753 aa9.41□□□□□ -0.9
SPIDR-218ENST00000522222 GTF3C3Q9Y5Q9 886 aa9.41□□□□□ -0.9
SPIDR-218ENST00000522222 LTN1O94822 1766 aa9.41□□□□□ -0.9
SPIDR-218ENST00000522222 ARHGEF25Q86VW2 580 aa9.4□□□□□ -0.9
SPIDR-218ENST00000522222 KCNH5Q8NCM2 988 aa9.4□□□□□ -0.9
SPIDR-218ENST00000522222 SPATA31A1Q5TZJ5 1347 aa9.39□□□□□ -0.91
SPIDR-218ENST00000522222 FAM98CQ17RN3 349 aaKnown RBP9.39□□□□□ -0.91
SPIDR-218ENST00000522222 SEPT12Q8IYM1 358 aa9.39□□□□□ -0.91
SPIDR-218ENST00000522222 SP7Q8TDD2 431 aaPredicted RBP9.39□□□□□ -0.91
SPIDR-218ENST00000522222 POLR3GLQ9BT43 218 aa9.39□□□□□ -0.91
SPIDR-218ENST00000522222 WNK3Q9BYP7 1800 aa9.39□□□□□ -0.91
SPIDR-218ENST00000522222 RGPD5Q99666 1765 aa9.39□□□□□ -0.91
SPIDR-218ENST00000522222 A0A0G2JS52 829 aa9.38□□□□□ -0.91
SPIDR-218ENST00000522222 MYT1Q01538 1121 aa9.38□□□□□ -0.91
SPIDR-218ENST00000522222 LARP1Q6PKG0 1096 aaKnown RBP9.38□□□□□ -0.91
SPIDR-218ENST00000522222 CRB1P82279 1406 aa9.38□□□□□ -0.91
SPIDR-218ENST00000522222 EVA1CP58658 441 aa9.37□□□□□ -0.91
SPIDR-218ENST00000522222 MIER1Q8N108 512 aa9.37□□□□□ -0.91
SPIDR-218ENST00000522222 UPF1Q92900 1129 aaKnown RBP eCLIP9.37□□□□□ -0.91
SPIDR-218ENST00000522222 CARD14Q9BXL6 1004 aa9.37□□□□□ -0.91
SPIDR-218ENST00000522222 AXIN2Q9Y2T1 843 aa9.37□□□□□ -0.91
SPIDR-218ENST00000522222 LRRC37A3O60309 1634 aa9.37□□□□□ -0.91
SPIDR-218ENST00000522222 PARP4Q9UKK3 1724 aaKnown RBP9.36□□□□□ -0.91
SPIDR-218ENST00000522222 WDR17Q8IZU2 1322 aa9.36□□□□□ -0.91
SPIDR-218ENST00000522222 EP400Q96L91 3159 aa9.36□□□□□ -0.91
SPIDR-218ENST00000522222 C11orf95C9JLR9 678 aaPredicted RBP9.36□□□□□ -0.91
SPIDR-218ENST00000522222 ONECUT3O60422 494 aaPredicted RBP9.36□□□□□ -0.91
SPIDR-218ENST00000522222 COG3Q96JB2 828 aa9.36□□□□□ -0.91
SPIDR-218ENST00000522222 GGNBP2Q9H3C7 697 aa9.36□□□□□ -0.91
SPIDR-218ENST00000522222 USP35Q9P2H5 1018 aa9.36□□□□□ -0.91
SPIDR-218ENST00000522222 ANKRD26Q9UPS8 1709 aa9.36□□□□□ -0.91
SPIDR-218ENST00000522222 KIF7Q2M1P5 1343 aa9.35□□□□□ -0.91
SPIDR-218ENST00000522222 FYB1O15117 783 aa9.35□□□□□ -0.91
SPIDR-218ENST00000522222 BLMP54132 1417 aaPredicted RBP9.35□□□□□ -0.91
SPIDR-218ENST00000522222 TCP11L2Q8N4U5 519 aa9.35□□□□□ -0.91
SPIDR-218ENST00000522222 PEAK1Q9H792 1746 aa9.35□□□□□ -0.91
SPIDR-218ENST00000522222 RTL1A6NKG5 1358 aa9.35□□□□□ -0.91
SPIDR-218ENST00000522222 ERBB3P21860 1342 aa9.34□□□□□ -0.91
SPIDR-218ENST00000522222 MAP3K19Q56UN5 1328 aa9.34□□□□□ -0.91
SPIDR-218ENST00000522222 DISP2A7MBM2 1401 aa9.34□□□□□ -0.91
SPIDR-218ENST00000522222 CSB-PGBD3P0DP91 1061 aa9.34□□□□□ -0.91
SPIDR-218ENST00000522222 DSG3P32926 999 aa9.34□□□□□ -0.91
SPIDR-218ENST00000522222 BARGINQ6ZT62 677 aa9.34□□□□□ -0.91
SPIDR-218ENST00000522222 KRT27Q7Z3Y8 459 aa9.34□□□□□ -0.91
SPIDR-218ENST00000522222 FAM208AQ9UK61 1670 aaKnown RBP9.34□□□□□ -0.91
SPIDR-218ENST00000522222 CGNL1Q0VF96 1302 aa9.33□□□□□ -0.92
SPIDR-218ENST00000522222 FBLN1P23142 703 aa9.33□□□□□ -0.92
SPIDR-218ENST00000522222 TOM1L2Q6ZVM7 507 aa9.33□□□□□ -0.92
SPIDR-218ENST00000522222 TNS1Q9HBL0 1735 aaKnown RBP9.32□□□□□ -0.92
SPIDR-218ENST00000522222 RRS1Q15050 365 aaKnown RBP9.32□□□□□ -0.92
SPIDR-218ENST00000522222 ANKRD24Q8TF21 1146 aa9.32□□□□□ -0.92
SPIDR-218ENST00000522222 FOXD4L1Q9NU39 408 aa9.32□□□□□ -0.92
SPIDR-218ENST00000522222 THRAP3Q9Y2W1 955 aaKnown RBP9.32□□□□□ -0.92
SPIDR-218ENST00000522222 CCDC7Q96M83 1385 aa9.32□□□□□ -0.92
SPIDR-218ENST00000522222 TNS2Q63HR2 1409 aa9.31□□□□□ -0.92
SPIDR-218ENST00000522222 RGPD1P0DJD0 1748 aa9.31□□□□□ -0.92
SPIDR-218ENST00000522222 HOXC9P31274 260 aa9.31□□□□□ -0.92
SPIDR-218ENST00000522222 FAM182BQ5T319 152 aa9.31□□□□□ -0.92
SPIDR-218ENST00000522222 IP6K1Q92551 441 aa9.31□□□□□ -0.92
SPIDR-218ENST00000522222 CARD10Q9BWT7 1032 aa9.31□□□□□ -0.92
SPIDR-218ENST00000522222 PANK3Q9H999 370 aa9.31□□□□□ -0.92
SPIDR-218ENST00000522222 NSD2O96028 1365 aa9.31□□□□□ -0.92
SPIDR-218ENST00000522222 FLT4P35916 1363 aa9.3□□□□□ -0.92
SPIDR-218ENST00000522222 AMPHP49418 695 aa9.3□□□□□ -0.92
SPIDR-218ENST00000522222 NLRP2Q9NX02 1062 aa9.3□□□□□ -0.92
SPIDR-218ENST00000522222 WASHC2AQ641Q2 1341 aa9.3□□□□□ -0.92
SPIDR-218ENST00000522222 RGPD2P0DJD1 1756 aa9.29□□□□□ -0.92
SPIDR-218ENST00000522222 KIF24Q5T7B8 1368 aa9.29□□□□□ -0.92
SPIDR-218ENST00000522222 LTV1Q96GA3 475 aaPredicted RBP9.29□□□□□ -0.92
SPIDR-218ENST00000522222 YTHDC1Q96MU7 727 aaKnown RBP9.29□□□□□ -0.92
SPIDR-218ENST00000522222 EMILIN1Q9Y6C2 1016 aa9.29□□□□□ -0.92
SPIDR-218ENST00000522222 OVOS2A0A0G2JMS6 1433 aa9.29□□□□□ -0.92
SPIDR-218ENST00000522222 SMG6Q86US8 1419 aaKnown RBP9.29□□□□□ -0.92
SPIDR-218ENST00000522222 INSRP06213 1382 aa9.28□□□□□ -0.92
SPIDR-218ENST00000522222 PDE3BQ13370 1112 aa9.28□□□□□ -0.92
SPIDR-218ENST00000522222 MEGF6O75095 1541 aa9.27□□□□□ -0.93
SPIDR-218ENST00000522222 SLC4A2P04920 1241 aa9.27□□□□□ -0.93
SPIDR-218ENST00000522222 DDB1Q16531 1140 aa9.27□□□□□ -0.93
SPIDR-218ENST00000522222 CDCA7Q9BWT1 371 aaPredicted RBP9.27□□□□□ -0.93
SPIDR-218ENST00000522222 SHANK3Q9BYB0 1731 aa9.26□□□□□ -0.93
SPIDR-218ENST00000522222 TNNT2P45379 298 aaPredicted RBP9.26□□□□□ -0.93
SPIDR-218ENST00000522222 HSP90AB2PQ58FF8 381 aa9.26□□□□□ -0.93
SPIDR-218ENST00000522222 AMER1Q5JTC6 1135 aaPredicted RBP9.26□□□□□ -0.93
SPIDR-218ENST00000522222 FAM196AQ6ZSG2 479 aa9.26□□□□□ -0.93
SPIDR-218ENST00000522222 DEFB132Q7Z7B7 95 aa9.26□□□□□ -0.93
SPIDR-218ENST00000522222 CCDC125Q86Z20 511 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms