RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 AMPHP49418 695 aa23.61■■□□□ 1.37
TRAM1-203ENST00000520700 CAMTA1Q9Y6Y1 1673 aa23.6■■□□□ 1.37
TRAM1-203ENST00000520700 NWD2Q9ULI1 1742 aa23.6■■□□□ 1.37
TRAM1-203ENST00000520700 ZNF772Q68DY9 489 aaPredicted RBP23.6■■□□□ 1.37
TRAM1-203ENST00000520700 USP21Q9UK80 565 aa23.6■■□□□ 1.37
TRAM1-203ENST00000520700 EMILIN1Q9Y6C2 1016 aa23.6■■□□□ 1.37
TRAM1-203ENST00000520700 FLT4P35916 1363 aa23.6■■□□□ 1.37
TRAM1-203ENST00000520700 INSRP06213 1382 aa23.58■■□□□ 1.37
TRAM1-203ENST00000520700 PRKRIP1Q9H875 184 aaPredicted RBP23.58■■□□□ 1.37
TRAM1-203ENST00000520700 MAP2P11137 1827 aaKnown RBP23.57■■□□□ 1.36
TRAM1-203ENST00000520700 ZBTB7CA1YPR0 619 aa23.57■■□□□ 1.36
TRAM1-203ENST00000520700 PPP2R1AP30153 589 aa23.57■■□□□ 1.36
TRAM1-203ENST00000520700 RGS17Q9UGC6 210 aaPredicted RBP23.57■■□□□ 1.36
TRAM1-203ENST00000520700 LTN1O94822 1766 aa23.57■■□□□ 1.36
TRAM1-203ENST00000520700 MTHFSP49914 203 aa23.56■■□□□ 1.36
TRAM1-203ENST00000520700 COL5A2P05997 1499 aaPredicted RBP23.56■■□□□ 1.36
TRAM1-203ENST00000520700 PLCH1Q4KWH8 1693 aa23.55■■□□□ 1.36
TRAM1-203ENST00000520700 VPS72Q15906 364 aa23.55■■□□□ 1.36
TRAM1-203ENST00000520700 HSP90AB2PQ58FF8 381 aa23.55■■□□□ 1.36
TRAM1-203ENST00000520700 TRPC5Q9UL62 973 aaPredicted RBP23.55■■□□□ 1.36
TRAM1-203ENST00000520700 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.54■■□□□ 1.36
TRAM1-203ENST00000520700 EVA1CP58658 441 aa23.54■■□□□ 1.36
TRAM1-203ENST00000520700 CNGB1Q14028 1251 aaPredicted RBP23.54■■□□□ 1.36
TRAM1-203ENST00000520700 ERBB3P21860 1342 aa23.54■■□□□ 1.36
TRAM1-203ENST00000520700 WDR17Q8IZU2 1322 aa23.54■■□□□ 1.36
TRAM1-203ENST00000520700 PHF23Q9BUL5 403 aaPredicted RBP23.53■■□□□ 1.36
TRAM1-203ENST00000520700 CDK12Q9NYV4 1490 aaPredicted RBP23.53■■□□□ 1.36
TRAM1-203ENST00000520700 PEAK1Q9H792 1746 aa23.53■■□□□ 1.36
TRAM1-203ENST00000520700 ATRNO75882 1429 aa23.52■■□□□ 1.36
TRAM1-203ENST00000520700 PPM1GO15355 546 aaPredicted RBP23.52■■□□□ 1.36
TRAM1-203ENST00000520700 ANKRD24Q8TF21 1146 aa23.52■■□□□ 1.36
TRAM1-203ENST00000520700 QTRT2Q9H974 415 aaKnown RBP23.52■■□□□ 1.36
TRAM1-203ENST00000520700 NRAPQ86VF7 1730 aa23.51■■□□□ 1.35
TRAM1-203ENST00000520700 ANP32CO43423 234 aa23.5■■□□□ 1.35
TRAM1-203ENST00000520700 STRN4Q9NRL3 753 aa23.5■■□□□ 1.35
TRAM1-203ENST00000520700 MYBBP1AQ9BQG0 1328 aaKnown RBP23.5■■□□□ 1.35
TRAM1-203ENST00000520700 LARP1Q6PKG0 1096 aaKnown RBP23.49■■□□□ 1.35
TRAM1-203ENST00000520700 CARD10Q9BWT7 1032 aa23.49■■□□□ 1.35
TRAM1-203ENST00000520700 SPATA31A5Q5VU36 1347 aa23.49■■□□□ 1.35
TRAM1-203ENST00000520700 SPATA31A7Q8IWB4 1347 aa23.49■■□□□ 1.35
TRAM1-203ENST00000520700 GJD4Q96KN9 370 aaPredicted RBP23.48■■□□□ 1.35
TRAM1-203ENST00000520700 CRB1P82279 1406 aa23.48■■□□□ 1.35
TRAM1-203ENST00000520700 THRAP3Q9Y2W1 955 aaKnown RBP23.47■■□□□ 1.35
TRAM1-203ENST00000520700 SPATA31A1Q5TZJ5 1347 aa23.47■■□□□ 1.35
TRAM1-203ENST00000520700 RGPD5Q99666 1765 aa23.47■■□□□ 1.35
TRAM1-203ENST00000520700 CSB-PGBD3P0DP91 1061 aa23.46■■□□□ 1.35
TRAM1-203ENST00000520700 EIF4A2Q14240 407 aaKnown RBP23.46■■□□□ 1.35
TRAM1-203ENST00000520700 CFAP53Q96M91 514 aa23.46■■□□□ 1.35
TRAM1-203ENST00000520700 ONECUT3O60422 494 aaPredicted RBP23.45■■□□□ 1.34
TRAM1-203ENST00000520700 IL13P35225 146 aa23.45■■□□□ 1.34
TRAM1-203ENST00000520700 RBM6P78332 1123 aaKnown RBP23.45■■□□□ 1.34
TRAM1-203ENST00000520700 POTEAQ6S8J7 498 aa23.45■■□□□ 1.34
TRAM1-203ENST00000520700 TOM1L2Q6ZVM7 507 aa23.45■■□□□ 1.34
TRAM1-203ENST00000520700 DIAPH1O60610 1272 aaKnown RBP23.43■■□□□ 1.34
TRAM1-203ENST00000520700 BARGINQ6ZT62 677 aa23.43■■□□□ 1.34
TRAM1-203ENST00000520700 LTV1Q96GA3 475 aaPredicted RBP23.43■■□□□ 1.34
TRAM1-203ENST00000520700 NBPF6Q5VWK0 638 aa23.42■■□□□ 1.34
TRAM1-203ENST00000520700 DIEXFQ68CQ4 756 aaKnown RBP23.42■■□□□ 1.34
TRAM1-203ENST00000520700 TCP11L2Q8N4U5 519 aa23.42■■□□□ 1.34
TRAM1-203ENST00000520700 NBPF4Q96M43 638 aa23.42■■□□□ 1.34
TRAM1-203ENST00000520700 NLRP2Q9NX02 1062 aa23.42■■□□□ 1.34
TRAM1-203ENST00000520700 COL3A1P02461 1466 aaPredicted RBP23.42■■□□□ 1.34
TRAM1-203ENST00000520700 RXRBP28702 533 aa23.41■■□□□ 1.34
TRAM1-203ENST00000520700 FAM208AQ9UK61 1670 aaKnown RBP23.41■■□□□ 1.34
TRAM1-203ENST00000520700 NCAPD2Q15021 1401 aa23.41■■□□□ 1.34
TRAM1-203ENST00000520700 EYA1Q99502 592 aa23.4■■□□□ 1.34
TRAM1-203ENST00000520700 CCDC9Q9Y3X0 531 aaKnown RBP23.4■■□□□ 1.34
TRAM1-203ENST00000520700 IGSF1Q8N6C5 1336 aa23.39■■□□□ 1.34
TRAM1-203ENST00000520700 CDCA7Q9BWT1 371 aaPredicted RBP23.39■■□□□ 1.33
TRAM1-203ENST00000520700 GLI3P10071 1580 aa23.38■■□□□ 1.33
TRAM1-203ENST00000520700 NUDCQ9Y266 331 aa23.37■■□□□ 1.33
TRAM1-203ENST00000520700 USP35Q9P2H5 1018 aa23.35■■□□□ 1.33
TRAM1-203ENST00000520700 PLEKHG2Q9H7P9 1386 aa23.34■■□□□ 1.33
TRAM1-203ENST00000520700 DISP2A7MBM2 1401 aa23.33■■□□□ 1.33
TRAM1-203ENST00000520700 KDRP35968 1356 aa23.33■■□□□ 1.33
TRAM1-203ENST00000520700 IL2RBP14784 551 aa23.32■■□□□ 1.32
TRAM1-203ENST00000520700 FAM98CQ17RN3 349 aaKnown RBP23.32■■□□□ 1.32
TRAM1-203ENST00000520700 RGPD1P0DJD0 1748 aa23.32■■□□□ 1.32
TRAM1-203ENST00000520700 SULT6B1Q6IMI4 303 aa23.29■■□□□ 1.32
TRAM1-203ENST00000520700 SEPT12Q8IYM1 358 aa23.29■■□□□ 1.32
TRAM1-203ENST00000520700 USHBP1Q8N6Y0 703 aa23.29■■□□□ 1.32
TRAM1-203ENST00000520700 RAPGEF4Q8WZA2 1011 aa23.29■■□□□ 1.32
TRAM1-203ENST00000520700 RGPD2P0DJD1 1756 aa23.29■■□□□ 1.32
TRAM1-203ENST00000520700 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.28■■□□□ 1.32
TRAM1-203ENST00000520700 U2SURPO15042 1029 aaKnown RBP23.27■■□□□ 1.32
TRAM1-203ENST00000520700 FCHSD2O94868 740 aa23.27■■□□□ 1.32
TRAM1-203ENST00000520700 TATP17735 454 aaPredicted RBP23.27■■□□□ 1.32
TRAM1-203ENST00000520700 THSD7AQ9UPZ6 1657 aa23.27■■□□□ 1.32
TRAM1-203ENST00000520700 CCER2I3L3R5 266 aa23.26■■□□□ 1.31
TRAM1-203ENST00000520700 OVOS2A0A0G2JMS6 1433 aa23.25■■□□□ 1.31
TRAM1-203ENST00000520700 EXOC5O00471 708 aa23.25■■□□□ 1.31
TRAM1-203ENST00000520700 U2AF1L5P0DN76 240 aaPredicted RBP23.25■■□□□ 1.31
TRAM1-203ENST00000520700 U2AF1Q01081 240 aaKnown RBP eCLIP23.25■■□□□ 1.31
TRAM1-203ENST00000520700 CCDC184Q52MB2 194 aa23.25■■□□□ 1.31
TRAM1-203ENST00000520700 AEBP1Q8IUX7 1158 aa23.25■■□□□ 1.31
TRAM1-203ENST00000520700 RGS12O14924 1447 aa23.24■■□□□ 1.31
TRAM1-203ENST00000520700 MEGF6O75095 1541 aa23.23■■□□□ 1.31
TRAM1-203ENST00000520700 DDB1Q16531 1140 aa23.23■■□□□ 1.31
TRAM1-203ENST00000520700 PARP4Q9UKK3 1724 aaKnown RBP23.22■■□□□ 1.31
TRAM1-203ENST00000520700 HMOX1P09601 288 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms