RNA–Protein interactions for RNA: ENST00000519219.1

TRIM35-202, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-202ENST00000519219 NFAT5O94916 1531 aa12.62□□□□□ -0.39
TRIM35-202ENST00000519219 MON2Q7Z3U7 1717 aa12.62□□□□□ -0.39
TRIM35-202ENST00000519219 BRD4O60885 1362 aaPredicted RBP12.62□□□□□ -0.39
TRIM35-202ENST00000519219 PDGFDQ9GZP0 370 aaPredicted RBP12.62□□□□□ -0.39
TRIM35-202ENST00000519219 TOM1L2Q6ZVM7 507 aa12.61□□□□□ -0.39
TRIM35-202ENST00000519219 MARCH10Q8NA82 808 aaPredicted RBP12.61□□□□□ -0.39
TRIM35-202ENST00000519219 TTC21BQ7Z4L5 1316 aa12.61□□□□□ -0.39
TRIM35-202ENST00000519219 WDR17Q8IZU2 1322 aa12.61□□□□□ -0.39
TRIM35-202ENST00000519219 DDB1Q16531 1140 aa12.6□□□□□ -0.39
TRIM35-202ENST00000519219 NBPF14Q5TI25 921 aa12.6□□□□□ -0.39
TRIM35-202ENST00000519219 ARHGEF25Q86VW2 580 aa12.6□□□□□ -0.39
TRIM35-202ENST00000519219 EVC2Q86UK5 1308 aa12.6□□□□□ -0.39
TRIM35-202ENST00000519219 LTN1O94822 1766 aa12.59□□□□□ -0.39
TRIM35-202ENST00000519219 MYOM1P52179 1685 aa12.59□□□□□ -0.39
TRIM35-202ENST00000519219 PROM2Q8N271 834 aa12.59□□□□□ -0.39
TRIM35-202ENST00000519219 KAT6BQ8WYB5 2073 aa12.58□□□□□ -0.39
TRIM35-202ENST00000519219 ROCK2O75116 1388 aaKnown RBP12.58□□□□□ -0.4
TRIM35-202ENST00000519219 KCNQ2O43526 872 aa12.58□□□□□ -0.4
TRIM35-202ENST00000519219 NEUROD1Q13562 356 aa12.58□□□□□ -0.4
TRIM35-202ENST00000519219 USP54Q70EL1 1684 aa12.57□□□□□ -0.4
TRIM35-202ENST00000519219 SPON1Q9HCB6 807 aa12.57□□□□□ -0.4
TRIM35-202ENST00000519219 CD163L1Q9NR16 1453 aa12.57□□□□□ -0.4
TRIM35-202ENST00000519219 PLSCR1O15162 318 aa12.56□□□□□ -0.4
TRIM35-202ENST00000519219 BCL11BQ9C0K0 894 aaPredicted RBP12.56□□□□□ -0.4
TRIM35-202ENST00000519219 NHSQ6T4R5 1651 aa12.56□□□□□ -0.4
TRIM35-202ENST00000519219 KTN1Q86UP2 1357 aaKnown RBP12.56□□□□□ -0.4
TRIM35-202ENST00000519219 CSB-PGBD3P0DP91 1061 aa12.55□□□□□ -0.4
TRIM35-202ENST00000519219 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.55□□□□□ -0.4
TRIM35-202ENST00000519219 CARD10Q9BWT7 1032 aa12.55□□□□□ -0.4
TRIM35-202ENST00000519219 PPP1R1BQ9UD71 204 aaPredicted RBP12.55□□□□□ -0.4
TRIM35-202ENST00000519219 TTC21AQ8NDW8 1320 aa12.55□□□□□ -0.4
TRIM35-202ENST00000519219 BTAF1O14981 1849 aa12.55□□□□□ -0.4
TRIM35-202ENST00000519219 BCL9O00512 1426 aa12.54□□□□□ -0.4
TRIM35-202ENST00000519219 TNS2Q63HR2 1409 aa12.54□□□□□ -0.4
TRIM35-202ENST00000519219 ZBTB7AO95365 584 aa12.54□□□□□ -0.4
TRIM35-202ENST00000519219 NME9Q86XW9 330 aa12.54□□□□□ -0.4
TRIM35-202ENST00000519219 ABCC6O95255 1503 aa12.53□□□□□ -0.4
TRIM35-202ENST00000519219 C11orf95C9JLR9 678 aaPredicted RBP12.53□□□□□ -0.4
TRIM35-202ENST00000519219 YY1P25490 414 aa12.53□□□□□ -0.4
TRIM35-202ENST00000519219 KCNH5Q8NCM2 988 aa12.53□□□□□ -0.4
TRIM35-202ENST00000519219 ZNF692Q9BU19 519 aaPredicted RBP12.53□□□□□ -0.4
TRIM35-202ENST00000519219 SBNO2Q9Y2G9 1366 aa12.53□□□□□ -0.4
TRIM35-202ENST00000519219 NINLQ9Y2I6 1382 aa12.53□□□□□ -0.4
TRIM35-202ENST00000519219 PAPPAQ13219 1627 aa12.52□□□□□ -0.4
TRIM35-202ENST00000519219 RGPD2P0DJD1 1756 aa12.52□□□□□ -0.41
TRIM35-202ENST00000519219 TXNRD1Q16881 649 aa12.52□□□□□ -0.41
TRIM35-202ENST00000519219 USP31Q70CQ4 1352 aa12.52□□□□□ -0.41
TRIM35-202ENST00000519219 PTGER2P43116 358 aa12.51□□□□□ -0.41
TRIM35-202ENST00000519219 ACSBG1Q96GR2 724 aa12.51□□□□□ -0.41
TRIM35-202ENST00000519219 CDCA7Q9BWT1 371 aaPredicted RBP12.51□□□□□ -0.41
TRIM35-202ENST00000519219 ATF5Q9Y2D1 282 aaPredicted RBP12.51□□□□□ -0.41
TRIM35-202ENST00000519219 CCDC7Q96M83 1385 aa12.51□□□□□ -0.41
TRIM35-202ENST00000519219 EXOC5O00471 708 aa12.5□□□□□ -0.41
TRIM35-202ENST00000519219 ERBB3P21860 1342 aa12.5□□□□□ -0.41
TRIM35-202ENST00000519219 TUBGCP6Q96RT7 1819 aa12.5□□□□□ -0.41
TRIM35-202ENST00000519219 SLC12A5Q9H2X9 1139 aa12.49□□□□□ -0.41
TRIM35-202ENST00000519219 NLRP2Q9NX02 1062 aa12.49□□□□□ -0.41
TRIM35-202ENST00000519219 SLC15A2Q16348 729 aa12.48□□□□□ -0.41
TRIM35-202ENST00000519219 SHANK3Q9BYB0 1731 aa12.48□□□□□ -0.41
TRIM35-202ENST00000519219 A0A1W2PP64 1363 aa12.47□□□□□ -0.41
TRIM35-202ENST00000519219 TMC1Q8TDI8 760 aa12.47□□□□□ -0.41
TRIM35-202ENST00000519219 ANKRD24Q8TF21 1146 aa12.47□□□□□ -0.41
TRIM35-202ENST00000519219 CARD11Q9BXL7 1154 aa12.47□□□□□ -0.41
TRIM35-202ENST00000519219 STK32BQ9NY57 414 aa12.47□□□□□ -0.41
TRIM35-202ENST00000519219 EDC4Q6P2E9 1401 aaKnown RBP12.46□□□□□ -0.41
TRIM35-202ENST00000519219 DOT1LQ8TEK3 1739 aa12.46□□□□□ -0.41
TRIM35-202ENST00000519219 FAM208AQ9UK61 1670 aaKnown RBP12.46□□□□□ -0.41
TRIM35-202ENST00000519219 IL2RBP14784 551 aa12.46□□□□□ -0.41
TRIM35-202ENST00000519219 ZNF827Q17R98 1081 aa12.46□□□□□ -0.41
TRIM35-202ENST00000519219 SGIP1Q9BQI5 828 aa12.46□□□□□ -0.41
TRIM35-202ENST00000519219 FHDC1Q9C0D6 1143 aaPredicted RBP12.46□□□□□ -0.41
TRIM35-202ENST00000519219 CHD4Q14839 1912 aa12.46□□□□□ -0.42
TRIM35-202ENST00000519219 FBLN1P23142 703 aa12.45□□□□□ -0.42
TRIM35-202ENST00000519219 IFFO2Q5TF58 517 aa12.45□□□□□ -0.42
TRIM35-202ENST00000519219 LRRC4BQ9NT99 713 aa12.45□□□□□ -0.42
TRIM35-202ENST00000519219 LTV1Q96GA3 475 aaPredicted RBP12.44□□□□□ -0.42
TRIM35-202ENST00000519219 QSER1Q2KHR3 1735 aa12.43□□□□□ -0.42
TRIM35-202ENST00000519219 KCNQ4P56696 695 aa12.43□□□□□ -0.42
TRIM35-202ENST00000519219 HDGFL2Q7Z4V5 671 aaPredicted RBP12.43□□□□□ -0.42
TRIM35-202ENST00000519219 SYT17Q9BSW7 474 aa12.43□□□□□ -0.42
TRIM35-202ENST00000519219 LY75O60449 1722 aa12.42□□□□□ -0.42
TRIM35-202ENST00000519219 MTFR1LQ9H019 292 aa12.42□□□□□ -0.42
TRIM35-202ENST00000519219 COL24A1Q17RW2 1714 aa12.42□□□□□ -0.42
TRIM35-202ENST00000519219 DDX54Q8TDD1 881 aaKnown RBP12.41□□□□□ -0.42
TRIM35-202ENST00000519219 TESK2Q96S53 571 aa12.41□□□□□ -0.42
TRIM35-202ENST00000519219 MEGF6O75095 1541 aa12.41□□□□□ -0.42
TRIM35-202ENST00000519219 MAP3K19Q56UN5 1328 aa12.4□□□□□ -0.42
TRIM35-202ENST00000519219 DCAF8L1A6NGE4 600 aa12.4□□□□□ -0.42
TRIM35-202ENST00000519219 IP6K1Q92551 441 aa12.4□□□□□ -0.42
TRIM35-202ENST00000519219 NSD2O96028 1365 aa12.4□□□□□ -0.42
TRIM35-202ENST00000519219 ZNF784Q8NCA9 323 aaPredicted RBP12.39□□□□□ -0.43
TRIM35-202ENST00000519219 AKT1S1Q96B36 256 aa12.39□□□□□ -0.43
TRIM35-202ENST00000519219 ARXQ96QS3 562 aa12.39□□□□□ -0.43
TRIM35-202ENST00000519219 TERF2IPQ9NYB0 399 aa12.39□□□□□ -0.43
TRIM35-202ENST00000519219 TONSLQ96HA7 1378 aa12.39□□□□□ -0.43
TRIM35-202ENST00000519219 ST20-MTHFSA0A0A6YYL1 179 aa12.38□□□□□ -0.43
TRIM35-202ENST00000519219 HOXC9P31274 260 aa12.38□□□□□ -0.43
TRIM35-202ENST00000519219 UTRNP46939 3433 aa12.38□□□□□ -0.43
TRIM35-202ENST00000519219 PNPLA7Q6ZV29 1317 aa12.37□□□□□ -0.43
TRIM35-202ENST00000519219 PRIM1P49642 420 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms