RNA–Protein interactions for RNA: ENST00000518307.1

IGHV1-12-201, Transcript of immunoglobulin heavy variable 1-12 (pseudogene), humanhuman

BASIC

Gene IGHV1-12, Length 205 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV1-12-201ENST00000518307 AXIN2Q9Y2T1 843 aa19.15■□□□□ 0.66
IGHV1-12-201ENST00000518307 ONECUT3O60422 494 aaPredicted RBP19.14■□□□□ 0.65
IGHV1-12-201ENST00000518307 COG3Q96JB2 828 aa19.14■□□□□ 0.65
IGHV1-12-201ENST00000518307 GGNBP2Q9H3C7 697 aa19.14■□□□□ 0.65
IGHV1-12-201ENST00000518307 SPATA31A1Q5TZJ5 1347 aa19.14■□□□□ 0.65
IGHV1-12-201ENST00000518307 CCDC7Q96M83 1385 aa19.14■□□□□ 0.65
IGHV1-12-201ENST00000518307 WNK3Q9BYP7 1800 aa19.14■□□□□ 0.65
IGHV1-12-201ENST00000518307 WASHC2AQ641Q2 1341 aa19.13■□□□□ 0.65
IGHV1-12-201ENST00000518307 LARP1Q6PKG0 1096 aaKnown RBP19.12■□□□□ 0.65
IGHV1-12-201ENST00000518307 PANK3Q9H999 370 aa19.12■□□□□ 0.65
IGHV1-12-201ENST00000518307 STRN4Q9NRL3 753 aa19.12■□□□□ 0.65
IGHV1-12-201ENST00000518307 PEAK1Q9H792 1746 aa19.11■□□□□ 0.65
IGHV1-12-201ENST00000518307 ZBTB7CA1YPR0 619 aa19.11■□□□□ 0.65
IGHV1-12-201ENST00000518307 CCDC9Q9Y3X0 531 aaKnown RBP19.11■□□□□ 0.65
IGHV1-12-201ENST00000518307 CRB1P82279 1406 aa19.1■□□□□ 0.65
IGHV1-12-201ENST00000518307 CGNL1Q0VF96 1302 aa19.1■□□□□ 0.65
IGHV1-12-201ENST00000518307 PARP4Q9UKK3 1724 aaKnown RBP19.09■□□□□ 0.65
IGHV1-12-201ENST00000518307 WDR17Q8IZU2 1322 aa19.09■□□□□ 0.65
IGHV1-12-201ENST00000518307 BLMP54132 1417 aaPredicted RBP19.08■□□□□ 0.65
IGHV1-12-201ENST00000518307 FAM208AQ9UK61 1670 aaKnown RBP19.08■□□□□ 0.65
IGHV1-12-201ENST00000518307 MAP3K19Q56UN5 1328 aa19.08■□□□□ 0.65
IGHV1-12-201ENST00000518307 FBLN1P23142 703 aa19.08■□□□□ 0.64
IGHV1-12-201ENST00000518307 FAM98CQ17RN3 349 aaKnown RBP19.08■□□□□ 0.64
IGHV1-12-201ENST00000518307 SEPT12Q8IYM1 358 aa19.08■□□□□ 0.64
IGHV1-12-201ENST00000518307 EVA1CP58658 441 aa19.07■□□□□ 0.64
IGHV1-12-201ENST00000518307 RTL1A6NKG5 1358 aa19.06■□□□□ 0.64
IGHV1-12-201ENST00000518307 ERBB3P21860 1342 aa19.06■□□□□ 0.64
IGHV1-12-201ENST00000518307 MAP2P11137 1827 aaKnown RBP19.06■□□□□ 0.64
IGHV1-12-201ENST00000518307 NSD2O96028 1365 aa19.06■□□□□ 0.64
IGHV1-12-201ENST00000518307 BARGINQ6ZT62 677 aa19.05■□□□□ 0.64
IGHV1-12-201ENST00000518307 IP6K1Q92551 441 aa19.05■□□□□ 0.64
IGHV1-12-201ENST00000518307 LRRC37A3O60309 1634 aa19.04■□□□□ 0.64
IGHV1-12-201ENST00000518307 RGPD2P0DJD1 1756 aa19.04■□□□□ 0.64
IGHV1-12-201ENST00000518307 RRS1Q15050 365 aaKnown RBP19.04■□□□□ 0.64
IGHV1-12-201ENST00000518307 TCP11L2Q8N4U5 519 aa19.04■□□□□ 0.64
IGHV1-12-201ENST00000518307 DISP2A7MBM2 1401 aa19.03■□□□□ 0.64
IGHV1-12-201ENST00000518307 PER1O15534 1290 aaPredicted RBP19.03■□□□□ 0.64
IGHV1-12-201ENST00000518307 HOXC9P31274 260 aa19.03■□□□□ 0.64
IGHV1-12-201ENST00000518307 THRAP3Q9Y2W1 955 aaKnown RBP19.03■□□□□ 0.64
IGHV1-12-201ENST00000518307 KIF24Q5T7B8 1368 aa19.03■□□□□ 0.64
IGHV1-12-201ENST00000518307 AMER1Q5JTC6 1135 aaPredicted RBP19.02■□□□□ 0.64
IGHV1-12-201ENST00000518307 CARD10Q9BWT7 1032 aa19.02■□□□□ 0.64
IGHV1-12-201ENST00000518307 USP35Q9P2H5 1018 aa19.02■□□□□ 0.64
IGHV1-12-201ENST00000518307 TOM1L2Q6ZVM7 507 aa19.01■□□□□ 0.63
IGHV1-12-201ENST00000518307 ANKRD24Q8TF21 1146 aa19.01■□□□□ 0.63
IGHV1-12-201ENST00000518307 UPF1Q92900 1129 aaKnown RBP eCLIP19■□□□□ 0.63
IGHV1-12-201ENST00000518307 FLT4P35916 1363 aa19■□□□□ 0.63
IGHV1-12-201ENST00000518307 SMG6Q86US8 1419 aaKnown RBP19■□□□□ 0.63
IGHV1-12-201ENST00000518307 KNSTRNQ9Y448 316 aa18.99■□□□□ 0.63
IGHV1-12-201ENST00000518307 EMILIN1Q9Y6C2 1016 aa18.99■□□□□ 0.63
IGHV1-12-201ENST00000518307 INSRP06213 1382 aa18.98■□□□□ 0.63
IGHV1-12-201ENST00000518307 AMPHP49418 695 aa18.98■□□□□ 0.63
IGHV1-12-201ENST00000518307 KRT27Q7Z3Y8 459 aa18.98■□□□□ 0.63
IGHV1-12-201ENST00000518307 NPC1L1Q9UHC9 1359 aa18.97■□□□□ 0.63
IGHV1-12-201ENST00000518307 CSB-PGBD3P0DP91 1061 aa18.97■□□□□ 0.63
IGHV1-12-201ENST00000518307 ZEB1P37275 1124 aaPredicted RBP18.97■□□□□ 0.63
IGHV1-12-201ENST00000518307 A0A0G2JS52 829 aa18.96■□□□□ 0.63
IGHV1-12-201ENST00000518307 MYT1Q01538 1121 aa18.96■□□□□ 0.63
IGHV1-12-201ENST00000518307 POLKQ9UBT6 870 aa18.96■□□□□ 0.63
IGHV1-12-201ENST00000518307 HSP90AB2PQ58FF8 381 aa18.94■□□□□ 0.62
IGHV1-12-201ENST00000518307 NLRP2Q9NX02 1062 aa18.94■□□□□ 0.62
IGHV1-12-201ENST00000518307 NCAPD2Q15021 1401 aa18.93■□□□□ 0.62
IGHV1-12-201ENST00000518307 TNS2Q63HR2 1409 aa18.93■□□□□ 0.62
IGHV1-12-201ENST00000518307 TNS1Q9HBL0 1735 aaKnown RBP18.93■□□□□ 0.62
IGHV1-12-201ENST00000518307 SHANK3Q9BYB0 1731 aa18.92■□□□□ 0.62
IGHV1-12-201ENST00000518307 LTV1Q96GA3 475 aaPredicted RBP18.92■□□□□ 0.62
IGHV1-12-201ENST00000518307 CDCA7Q9BWT1 371 aaPredicted RBP18.92■□□□□ 0.62
IGHV1-12-201ENST00000518307 RGPD1P0DJD0 1748 aa18.91■□□□□ 0.62
IGHV1-12-201ENST00000518307 SBF2Q86WG5 1849 aa18.91■□□□□ 0.62
IGHV1-12-201ENST00000518307 TNNT2P45379 298 aaPredicted RBP18.91■□□□□ 0.62
IGHV1-12-201ENST00000518307 MORC1Q86VD1 984 aa18.91■□□□□ 0.62
IGHV1-12-201ENST00000518307 FAM182BQ5T319 152 aa18.9■□□□□ 0.62
IGHV1-12-201ENST00000518307 NBPF6Q5VWK0 638 aa18.89■□□□□ 0.61
IGHV1-12-201ENST00000518307 NBPF4Q96M43 638 aa18.89■□□□□ 0.61
IGHV1-12-201ENST00000518307 MEGF6O75095 1541 aa18.89■□□□□ 0.61
IGHV1-12-201ENST00000518307 DDB1Q16531 1140 aa18.88■□□□□ 0.61
IGHV1-12-201ENST00000518307 OVOS2A0A0G2JMS6 1433 aa18.87■□□□□ 0.61
IGHV1-12-201ENST00000518307 BCL9O00512 1426 aa18.87■□□□□ 0.61
IGHV1-12-201ENST00000518307 PPM1GO15355 546 aaPredicted RBP18.87■□□□□ 0.61
IGHV1-12-201ENST00000518307 IL2RBP14784 551 aa18.87■□□□□ 0.61
IGHV1-12-201ENST00000518307 PDE3BQ13370 1112 aa18.87■□□□□ 0.61
IGHV1-12-201ENST00000518307 CC2D1BQ5T0F9 858 aaKnown RBP18.87■□□□□ 0.61
IGHV1-12-201ENST00000518307 PKD1L3Q7Z443 1732 aa18.86■□□□□ 0.61
IGHV1-12-201ENST00000518307 CCDC125Q86Z20 511 aa18.85■□□□□ 0.61
IGHV1-12-201ENST00000518307 MARCH10Q8NA82 808 aaPredicted RBP18.85■□□□□ 0.61
IGHV1-12-201ENST00000518307 EIF4A2Q14240 407 aaKnown RBP18.84■□□□□ 0.61
IGHV1-12-201ENST00000518307 FAM196AQ6ZSG2 479 aa18.84■□□□□ 0.61
IGHV1-12-201ENST00000518307 USHBP1Q8N6Y0 703 aa18.84■□□□□ 0.61
IGHV1-12-201ENST00000518307 EXOC5O00471 708 aa18.82■□□□□ 0.6
IGHV1-12-201ENST00000518307 EYA1Q99502 592 aa18.82■□□□□ 0.6
IGHV1-12-201ENST00000518307 COL3A1P02461 1466 aaPredicted RBP18.82■□□□□ 0.6
IGHV1-12-201ENST00000518307 NHSQ6T4R5 1651 aa18.81■□□□□ 0.6
IGHV1-12-201ENST00000518307 IGSF1Q8N6C5 1336 aa18.8■□□□□ 0.6
IGHV1-12-201ENST00000518307 MTHFSP49914 203 aa18.79■□□□□ 0.6
IGHV1-12-201ENST00000518307 RGPD3A6NKT7 1758 aaPredicted RBP18.78■□□□□ 0.6
IGHV1-12-201ENST00000518307 RGPD4Q7Z3J3 1758 aa18.78■□□□□ 0.6
IGHV1-12-201ENST00000518307 TRIM37O94972 964 aa18.78■□□□□ 0.6
IGHV1-12-201ENST00000518307 RREB1Q92766 1687 aa18.77■□□□□ 0.6
IGHV1-12-201ENST00000518307 PLEKHG2Q9H7P9 1386 aa18.77■□□□□ 0.6
IGHV1-12-201ENST00000518307 DOT1LQ8TEK3 1739 aa18.77■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms