RNA–Protein interactions for RNA: ENST00000517554.1

MTCL1-204, Transcript of microtubule crosslinking factor 1, humanhuman

TSL 1 (best)

Gene MTCL1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-204ENST00000517554 COG3Q96JB2 828 aa29.26■■■□□ 2.28
MTCL1-204ENST00000517554 SPATA31A1Q5TZJ5 1347 aa29.26■■■□□ 2.27
MTCL1-204ENST00000517554 EVA1CP58658 441 aa29.25■■■□□ 2.27
MTCL1-204ENST00000517554 FAM98CQ17RN3 349 aaKnown RBP29.24■■■□□ 2.27
MTCL1-204ENST00000517554 SEPT12Q8IYM1 358 aa29.23■■■□□ 2.27
MTCL1-204ENST00000517554 PANK3Q9H999 370 aa29.23■■■□□ 2.27
MTCL1-204ENST00000517554 KIF20BQ96Q89 1820 aa29.21■■■□□ 2.27
MTCL1-204ENST00000517554 RGPD5Q99666 1765 aa29.2■■■□□ 2.27
MTCL1-204ENST00000517554 LTN1O94822 1766 aa29.2■■■□□ 2.26
MTCL1-204ENST00000517554 USP35Q9P2H5 1018 aa29.19■■■□□ 2.26
MTCL1-204ENST00000517554 ABCC6O95255 1503 aa29.18■■■□□ 2.26
MTCL1-204ENST00000517554 WASHC2AQ641Q2 1341 aa29.17■■■□□ 2.26
MTCL1-204ENST00000517554 CRB1P82279 1406 aa29.17■■■□□ 2.26
MTCL1-204ENST00000517554 BRWD3Q6RI45 1802 aa29.17■■■□□ 2.26
MTCL1-204ENST00000517554 MAP3K19Q56UN5 1328 aa29.16■■■□□ 2.26
MTCL1-204ENST00000517554 THSD7AQ9UPZ6 1657 aa29.16■■■□□ 2.26
MTCL1-204ENST00000517554 WDR17Q8IZU2 1322 aa29.16■■■□□ 2.26
MTCL1-204ENST00000517554 CCDC7Q96M83 1385 aa29.16■■■□□ 2.26
MTCL1-204ENST00000517554 UPF1Q92900 1129 aaKnown RBP eCLIP29.14■■■□□ 2.26
MTCL1-204ENST00000517554 CGNL1Q0VF96 1302 aa29.14■■■□□ 2.26
MTCL1-204ENST00000517554 RRS1Q15050 365 aaKnown RBP29.13■■■□□ 2.25
MTCL1-204ENST00000517554 BARGINQ6ZT62 677 aa29.13■■■□□ 2.25
MTCL1-204ENST00000517554 TCP11L2Q8N4U5 519 aa29.13■■■□□ 2.25
MTCL1-204ENST00000517554 IP6K1Q92551 441 aa29.12■■■□□ 2.25
MTCL1-204ENST00000517554 TOM1L2Q6ZVM7 507 aa29.11■■■□□ 2.25
MTCL1-204ENST00000517554 ERBB3P21860 1342 aa29.11■■■□□ 2.25
MTCL1-204ENST00000517554 A0A0G2JS52 829 aa29.1■■■□□ 2.25
MTCL1-204ENST00000517554 MYT1Q01538 1121 aa29.1■■■□□ 2.25
MTCL1-204ENST00000517554 EP400Q96L91 3159 aa29.09■■■□□ 2.25
MTCL1-204ENST00000517554 HOXC9P31274 260 aa29.09■■■□□ 2.25
MTCL1-204ENST00000517554 THRAP3Q9Y2W1 955 aaKnown RBP29.09■■■□□ 2.25
MTCL1-204ENST00000517554 KRT27Q7Z3Y8 459 aa29.08■■■□□ 2.25
MTCL1-204ENST00000517554 BLMP54132 1417 aaPredicted RBP29.07■■■□□ 2.24
MTCL1-204ENST00000517554 CSB-PGBD3P0DP91 1061 aa29.07■■■□□ 2.24
MTCL1-204ENST00000517554 ANKRD24Q8TF21 1146 aa29.07■■■□□ 2.24
MTCL1-204ENST00000517554 CARD10Q9BWT7 1032 aa29.06■■■□□ 2.24
MTCL1-204ENST00000517554 PER1O15534 1290 aaPredicted RBP29.05■■■□□ 2.24
MTCL1-204ENST00000517554 AMPHP49418 695 aa29.05■■■□□ 2.24
MTCL1-204ENST00000517554 PEAK1Q9H792 1746 aa29.04■■■□□ 2.24
MTCL1-204ENST00000517554 EMILIN1Q9Y6C2 1016 aa29.04■■■□□ 2.24
MTCL1-204ENST00000517554 FAM182BQ5T319 152 aa29.03■■■□□ 2.24
MTCL1-204ENST00000517554 RTL1A6NKG5 1358 aa29.03■■■□□ 2.24
MTCL1-204ENST00000517554 ANKRD26Q9UPS8 1709 aa29.03■■■□□ 2.24
MTCL1-204ENST00000517554 AMER1Q5JTC6 1135 aaPredicted RBP29.02■■■□□ 2.24
MTCL1-204ENST00000517554 KNSTRNQ9Y448 316 aa29.02■■■□□ 2.24
MTCL1-204ENST00000517554 LTV1Q96GA3 475 aaPredicted RBP29.01■■■□□ 2.24
MTCL1-204ENST00000517554 DISP2A7MBM2 1401 aa29■■■□□ 2.23
MTCL1-204ENST00000517554 NSD2O96028 1365 aa29■■■□□ 2.23
MTCL1-204ENST00000517554 NLRP2Q9NX02 1062 aa29■■■□□ 2.23
MTCL1-204ENST00000517554 HSP90AB2PQ58FF8 381 aa28.99■■■□□ 2.23
MTCL1-204ENST00000517554 PARP4Q9UKK3 1724 aaKnown RBP28.98■■■□□ 2.23
MTCL1-204ENST00000517554 TNNT2P45379 298 aaPredicted RBP28.98■■■□□ 2.23
MTCL1-204ENST00000517554 POLKQ9UBT6 870 aa28.97■■■□□ 2.23
MTCL1-204ENST00000517554 WNK3Q9BYP7 1800 aa28.97■■■□□ 2.23
MTCL1-204ENST00000517554 FLT4P35916 1363 aa28.97■■■□□ 2.23
MTCL1-204ENST00000517554 KIF24Q5T7B8 1368 aa28.96■■■□□ 2.23
MTCL1-204ENST00000517554 INSRP06213 1382 aa28.95■■■□□ 2.23
MTCL1-204ENST00000517554 LRRC37A3O60309 1634 aa28.95■■■□□ 2.23
MTCL1-204ENST00000517554 MORC1Q86VD1 984 aa28.92■■■□□ 2.22
MTCL1-204ENST00000517554 MAP2P11137 1827 aaKnown RBP28.92■■■□□ 2.22
MTCL1-204ENST00000517554 PPM1GO15355 546 aaPredicted RBP28.92■■■□□ 2.22
MTCL1-204ENST00000517554 PDE3BQ13370 1112 aa28.92■■■□□ 2.22
MTCL1-204ENST00000517554 RGPD2P0DJD1 1756 aa28.91■■■□□ 2.22
MTCL1-204ENST00000517554 NBPF6Q5VWK0 638 aa28.91■■■□□ 2.22
MTCL1-204ENST00000517554 NBPF4Q96M43 638 aa28.91■■■□□ 2.22
MTCL1-204ENST00000517554 CDCA7Q9BWT1 371 aaPredicted RBP28.91■■■□□ 2.22
MTCL1-204ENST00000517554 FAM208AQ9UK61 1670 aaKnown RBP28.91■■■□□ 2.22
MTCL1-204ENST00000517554 DDB1Q16531 1140 aa28.9■■■□□ 2.22
MTCL1-204ENST00000517554 IL2RBP14784 551 aa28.87■■■□□ 2.21
MTCL1-204ENST00000517554 CC2D1BQ5T0F9 858 aaKnown RBP28.87■■■□□ 2.21
MTCL1-204ENST00000517554 SMG6Q86US8 1419 aaKnown RBP28.86■■■□□ 2.21
MTCL1-204ENST00000517554 ZEB1P37275 1124 aaPredicted RBP28.86■■■□□ 2.21
MTCL1-204ENST00000517554 CCDC125Q86Z20 511 aa28.86■■■□□ 2.21
MTCL1-204ENST00000517554 USHBP1Q8N6Y0 703 aa28.86■■■□□ 2.21
MTCL1-204ENST00000517554 MARCH10Q8NA82 808 aaPredicted RBP28.86■■■□□ 2.21
MTCL1-204ENST00000517554 FAM196AQ6ZSG2 479 aa28.85■■■□□ 2.21
MTCL1-204ENST00000517554 NPC1L1Q9UHC9 1359 aa28.84■■■□□ 2.21
MTCL1-204ENST00000517554 TNS2Q63HR2 1409 aa28.83■■■□□ 2.21
MTCL1-204ENST00000517554 EXOC5O00471 708 aa28.83■■■□□ 2.21
MTCL1-204ENST00000517554 MEGF6O75095 1541 aa28.81■■■□□ 2.2
MTCL1-204ENST00000517554 CNGB1Q14028 1251 aaPredicted RBP28.8■■■□□ 2.2
MTCL1-204ENST00000517554 EIF4A2Q14240 407 aaKnown RBP28.79■■■□□ 2.2
MTCL1-204ENST00000517554 DEFB132Q7Z7B7 95 aa28.79■■■□□ 2.2
MTCL1-204ENST00000517554 OVOS2A0A0G2JMS6 1433 aa28.79■■■□□ 2.2
MTCL1-204ENST00000517554 TRIM37O94972 964 aa28.79■■■□□ 2.2
MTCL1-204ENST00000517554 NCAPD2Q15021 1401 aa28.78■■■□□ 2.2
MTCL1-204ENST00000517554 EYA1Q99502 592 aa28.77■■■□□ 2.2
MTCL1-204ENST00000517554 TNS1Q9HBL0 1735 aaKnown RBP28.76■■■□□ 2.19
MTCL1-204ENST00000517554 RGPD1P0DJD0 1748 aa28.74■■■□□ 2.19
MTCL1-204ENST00000517554 BCL9O00512 1426 aa28.74■■■□□ 2.19
MTCL1-204ENST00000517554 PTF1AQ7RTS3 328 aa28.74■■■□□ 2.19
MTCL1-204ENST00000517554 MTHFSP49914 203 aa28.73■■■□□ 2.19
MTCL1-204ENST00000517554 SF3B2Q13435 895 aaKnown RBP28.72■■■□□ 2.19
MTCL1-204ENST00000517554 SHANK3Q9BYB0 1731 aa28.7■■■□□ 2.19
MTCL1-204ENST00000517554 SBF2Q86WG5 1849 aa28.7■■■□□ 2.18
MTCL1-204ENST00000517554 ZCRB1Q8TBF4 217 aaKnown RBP28.69■■■□□ 2.18
MTCL1-204ENST00000517554 DDX54Q8TDD1 881 aaKnown RBP28.69■■■□□ 2.18
MTCL1-204ENST00000517554 RAPGEF4Q8WZA2 1011 aa28.69■■■□□ 2.18
MTCL1-204ENST00000517554 IGSF1Q8N6C5 1336 aa28.68■■■□□ 2.18
MTCL1-204ENST00000517554 EN1Q05925 392 aaPredicted RBP28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms